Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_N13
         (757 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    29   0.053
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.5  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   6.1  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 28.7 bits (61), Expect = 0.053
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -3

Query: 302 KPANSKFK*PNIIMPYRSGTKKQHLVNSGISRRI 201
           KPA  K     ++   R  TKK HL NS IS+++
Sbjct: 486 KPAPVKISVQEVLNRVRKPTKKLHLKNSPISKKV 519


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 583  FIPLDYATIFCGFVIQIYLILL 648
            F P+DY  +F  F   I ++L+
Sbjct: 1078 FFPIDYTLVFSKFTSSIRMLLI 1099



 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +1

Query: 583 FIPLDYATIFCGFVIQIYLILLVRSELSKLRY 678
           F P+DY+ +F    + ++ I  V   +S L Y
Sbjct: 700 FFPIDYSLVFSETKLLLFKITSVMIAVSGLVY 731


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 13/49 (26%), Positives = 20/49 (40%)
 Frame = -3

Query: 479 FIWTPTSNIPQNMTSTKYKKNVNHTWAKKPTPLYMIITSLIMVTFSAFL 333
           FIW   S+  +   S  +KK V +   K     +  + S+    F A L
Sbjct: 496 FIWLVLSSTVRAYASRAFKKIVTYKGGKYRKVTFQCLKSIAWRAFLAVL 544


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,402
Number of Sequences: 336
Number of extensions: 3521
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)