Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_N13
         (757 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28737-6|AAL02486.1|  566|Caenorhabditis elegans Hypothetical pr...    30   2.0  
AC024825-1|ABA00169.1| 1908|Caenorhabditis elegans Plexin protei...    29   3.6  
AB080022-1|BAB85224.1| 1951|Caenorhabditis elegans plexin A prot...    29   3.6  
Z83216-1|CAB62780.1|  238|Caenorhabditis elegans Hypothetical pr...    29   4.7  
Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical pr...    28   8.2  
Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical pr...    28   8.2  
AL132949-24|CAB61102.1|  860|Caenorhabditis elegans Hypothetical...    28   8.2  

>U28737-6|AAL02486.1|  566|Caenorhabditis elegans Hypothetical
           protein F14B8.7 protein.
          Length = 566

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 14/57 (24%), Positives = 28/57 (49%)
 Frame = +1

Query: 250 LRYGIMIFGYLNLLFAGFICGAYIHYLNKNAENVTMISDVIIIYKGVGFFAHVWLTF 420
           LR G ++FG + +++   I    +   + N    ++ISDV+ +   V  F  +W  +
Sbjct: 145 LRLGCVVFGIIGVVYYLLIFVICLLGWSSNEGECSVISDVLNVMAAVFIFVQMWFVY 201


>AC024825-1|ABA00169.1| 1908|Caenorhabditis elegans Plexin protein 1
           protein.
          Length = 1908

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +3

Query: 282 KFAVCWFHMRCIHTLFEQECRECY 353
           K A+C F MR I T F+Q   +CY
Sbjct: 337 KSAICMFTMREIETSFKQNIMKCY 360


>AB080022-1|BAB85224.1| 1951|Caenorhabditis elegans plexin A
           protein.
          Length = 1951

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +3

Query: 282 KFAVCWFHMRCIHTLFEQECRECY 353
           K A+C F MR I T F+Q   +CY
Sbjct: 343 KSAICMFTMREIETSFKQNIMKCY 366


>Z83216-1|CAB62780.1|  238|Caenorhabditis elegans Hypothetical
           protein C08F11.1 protein.
          Length = 238

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +3

Query: 537 YRHFYNRYFNKYSYAIHSFGLCYYILWICDTNIFDSPS 650
           Y +F NRY N +SY      L Y++L +   ++FD  S
Sbjct: 132 YAYFDNRYINSFSYT-----LAYWMLTVLMKDMFDESS 164


>Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical
           protein ZC116.3 protein.
          Length = 3871

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
 Frame = +3

Query: 243 CAAPIRHYDIWLFKFAVCWFHMRCIHTL--FEQECRECYHDK*CYYHI 380
           C A I    ++    A C  +  CI+    FE +C+  YH   C YH+
Sbjct: 109 CEADIDECSVYNGTTAGCQNNGTCINNRGGFECQCQSGYHGSLCQYHM 156


>Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical
           protein ZC116.3 protein.
          Length = 3871

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
 Frame = +3

Query: 243 CAAPIRHYDIWLFKFAVCWFHMRCIHTL--FEQECRECYHDK*CYYHI 380
           C A I    ++    A C  +  CI+    FE +C+  YH   C YH+
Sbjct: 109 CEADIDECSVYNGTTAGCQNNGTCINNRGGFECQCQSGYHGSLCQYHM 156


>AL132949-24|CAB61102.1|  860|Caenorhabditis elegans Hypothetical
           protein Y53F4B.28 protein.
          Length = 860

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +1

Query: 316 YIHYLNKNAENVTMISDVIIIYKGVGFFAHVWLTFFLYFVE 438
           Y+H  N N + V++IS ++ I   V + AHV   +F +  E
Sbjct: 717 YLHLWNVNLDAVSLISMLMSIGFSVDYSAHVCYHYFAHVHE 757


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,470,218
Number of Sequences: 27780
Number of extensions: 307230
Number of successful extensions: 800
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 799
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)