Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_N13
         (757 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    27   0.19 
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    27   0.19 
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    27   0.19 
AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    23   4.1  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    22   5.4  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   5.4  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   9.4  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    21   9.4  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   9.4  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 27.1 bits (57), Expect = 0.19
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +1

Query: 388 VGFFAHVWLTFFLYFVEVIFC 450
           +G F   WL FFL +V V FC
Sbjct: 333 MGVFVVCWLPFFLMYVIVPFC 353


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 27.1 bits (57), Expect = 0.19
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +1

Query: 388 VGFFAHVWLTFFLYFVEVIFC 450
           +G F   WL FFL +V V FC
Sbjct: 333 MGVFVVCWLPFFLMYVIVPFC 353


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 27.1 bits (57), Expect = 0.19
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +1

Query: 388 VGFFAHVWLTFFLYFVEVIFC 450
           +G F   WL FFL +V V FC
Sbjct: 333 MGVFVVCWLPFFLMYVIVPFC 353


>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
           finger domain-Z3 isoform protein.
          Length = 92

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 333 QECRECYHDK*CYYHIQR 386
           QEC  C  +  CYY ++R
Sbjct: 6   QECPYCRRNFSCYYSLKR 23


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +1

Query: 388 VGFFAHVWLTFFLYFVEVIFC 450
           VG F   WL FF  ++   FC
Sbjct: 15  VGGFILCWLPFFTMYLVRAFC 35


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +1

Query: 388 VGFFAHVWLTFFLYFVEVIFC 450
           VG F   WL FF  ++   FC
Sbjct: 463 VGGFILCWLPFFTMYLVRAFC 483


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 388 VGFFAHVWLTFFLYFVEVIF 447
           VG F   WL FF+ ++   F
Sbjct: 312 VGGFVACWLPFFILYLATPF 331


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = -2

Query: 456 YTTEYDFNEIQEKRQ-PYMGKETHAFVYDN 370
           Y   YDFN+I EK Q  ++ +E    + +N
Sbjct: 385 YFILYDFNDIFEKDQASFLERERFLGIINN 414


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = -2

Query: 456 YTTEYDFNEIQEKRQ-PYMGKETHAFVYDN 370
           Y   YDFN+I EK Q  ++ +E    + +N
Sbjct: 385 YFILYDFNDIFEKDQASFLERERFLGIINN 414


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,069
Number of Sequences: 438
Number of extensions: 3714
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)