Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_N09
         (381 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0211 - 1601129-1601272,1601670-1602062,1602142-1602240,160...    57   5e-09
11_01_0210 - 1647922-1648065,1648459-1648851,1648930-1649028,164...    57   5e-09
08_01_0215 - 1714224-1714364,1714795-1715187,1715279-1715377,171...    56   7e-09
03_04_0204 - 18444903-18445054,18445445-18445676,18445765-184458...    29   1.6  

>12_01_0211 -
           1601129-1601272,1601670-1602062,1602142-1602240,
           1602920-1602988,1603071-1603328
          Length = 320

 Score = 56.8 bits (131), Expect = 5e-09
 Identities = 29/76 (38%), Positives = 40/76 (52%)
 Frame = +1

Query: 7   PEILGXSNHRLSXAKFQXXXXXXXXXXXXXXXPTLASAPHSIANGFKHLLAIAAVTXVEF 186
           PE+L  +   L   KF                PT+A+APH   NG+K++LA+A  T   +
Sbjct: 204 PEVLDLTEEDLME-KFASGVSMVASVSLAISYPTIAAAPHMFLNGYKNVLAVAVETEYSY 262

Query: 187 EXATTIKEFIKDPSKF 234
             A  IKE++KDPSKF
Sbjct: 263 PHADKIKEYLKDPSKF 278


>11_01_0210 -
           1647922-1648065,1648459-1648851,1648930-1649028,
           1649706-1649774,1649877-1650134
          Length = 320

 Score = 56.8 bits (131), Expect = 5e-09
 Identities = 29/76 (38%), Positives = 40/76 (52%)
 Frame = +1

Query: 7   PEILGXSNHRLSXAKFQXXXXXXXXXXXXXXXPTLASAPHSIANGFKHLLAIAAVTXVEF 186
           PE+L  +   L   KF                PT+A+APH   NG+K++LA+A  T   +
Sbjct: 204 PEVLDLTEEDLME-KFASGVSMVASVSLAISYPTIAAAPHMFLNGYKNVLAVAVETEYSY 262

Query: 187 EXATTIKEFIKDPSKF 234
             A  IKE++KDPSKF
Sbjct: 263 PHADKIKEYLKDPSKF 278


>08_01_0215 -
           1714224-1714364,1714795-1715187,1715279-1715377,
           1716248-1716316,1716408-1716665
          Length = 319

 Score = 56.4 bits (130), Expect = 7e-09
 Identities = 29/76 (38%), Positives = 40/76 (52%)
 Frame = +1

Query: 7   PEILGXSNHRLSXAKFQXXXXXXXXXXXXXXXPTLASAPHSIANGFKHLLAIAAVTXVEF 186
           PE+L  +   L   KF                PT+A+APH   NG+K++LA+A  T   +
Sbjct: 204 PEVLDLTEDDLME-KFASGVSMVASVSLAISYPTIAAAPHMFLNGYKNVLAVAVETEYSY 262

Query: 187 EXATTIKEFIKDPSKF 234
             A  IKE++KDPSKF
Sbjct: 263 PHADKIKEYLKDPSKF 278


>03_04_0204 -
           18444903-18445054,18445445-18445676,18445765-18445836,
           18446201-18446347,18446559-18446614,18446727-18446832,
           18446938-18447025,18447112-18447230,18448975-18449580,
           18449803-18449898,18450232-18450422,18453287-18453416,
           18453531-18453566
          Length = 676

 Score = 28.7 bits (61), Expect = 1.6
 Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = -3

Query: 142 NHWRWNAGLKQELGXQE-PKKEQRH 71
           NH +W   +K E+G QE  ++EQ+H
Sbjct: 69  NHEQWQGSVKNEIGNQENQQQEQKH 93


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.131    0.370 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,150,717
Number of Sequences: 37544
Number of extensions: 103480
Number of successful extensions: 275
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 275
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 624784784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)