Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_N09
         (381 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    24   1.6  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    23   3.8  
CR954257-5|CAJ14156.1|  227|Anopheles gambiae predicted protein ...    23   5.0  

>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
            channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +1

Query: 106  TLASAPHSIANGFKHLLAIAAVTXVEFEXATTIKEFIKDPSK 231
            TL +A H+I    +   A AAV  ++F   +  K FI   SK
Sbjct: 895  TLVTASHAIFIDHRGHKAPAAVVGLQFLHESLFKHFINITSK 936


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 265 RTVPPRQQLQRTLM 224
           RT+PP +QLQ  L+
Sbjct: 324 RTIPPEEQLQTELL 337


>CR954257-5|CAJ14156.1|  227|Anopheles gambiae predicted protein
           protein.
          Length = 227

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +3

Query: 60  WSCXCRCSFFGSWXPNSCFSPAFHRQWFQ 146
           W C CR  +  S   +SC+ P F + + Q
Sbjct: 80  WVCDCRPGYVYSPPQDSCY-PLFQQGFCQ 107


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.131    0.370 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,429
Number of Sequences: 2352
Number of extensions: 3461
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29074284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)