Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_N09
         (381 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   2.1  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    21   3.7  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    21   3.7  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   6.5  

>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +3

Query: 225 IKVRCSCCRGGTVRRR 272
           +++ C+CC G  VRRR
Sbjct: 402 VRILCACCPG-RVRRR 416


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -2

Query: 194 AXSNSTXVTAAMAKRC 147
           A +++T V+ AMA+RC
Sbjct: 128 ATTSTTIVSGAMAERC 143


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 30  PSALRCQVPSWSCXCRCSFF 89
           P  +   +PS++C  RCS +
Sbjct: 41  PGCVPKPIPSYACRGRCSSY 60


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = -2

Query: 56  WNLAXESRWFDXPRISG 6
           W    E +WF  P +SG
Sbjct: 264 WFEKLELKWFAVPAVSG 280


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.131    0.370 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,477
Number of Sequences: 438
Number of extensions: 999
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9300375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.3 bits)