Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_N06
(621 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 232 6e-60
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 225 7e-58
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 219 4e-56
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 218 1e-55
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 216 4e-55
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 215 5e-55
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 214 2e-54
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 211 9e-54
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 208 8e-53
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 206 3e-52
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 196 3e-49
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 194 1e-48
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 193 3e-48
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 191 1e-47
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 187 2e-46
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 186 4e-46
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 181 1e-44
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 178 8e-44
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 178 1e-43
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 177 2e-43
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 176 3e-43
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 176 3e-43
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 174 2e-42
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 171 1e-41
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 164 1e-39
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 161 2e-38
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 157 2e-37
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 152 7e-36
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 151 2e-35
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 147 2e-34
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 146 4e-34
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 146 4e-34
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 144 1e-33
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 144 1e-33
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 135 9e-31
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 130 2e-29
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 128 1e-28
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 119 5e-26
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 117 2e-25
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 115 8e-25
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 113 3e-24
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 113 4e-24
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 109 5e-23
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 109 5e-23
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 107 2e-22
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 105 9e-22
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 104 2e-21
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 103 3e-21
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 103 5e-21
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 102 6e-21
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 100 3e-20
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 100 3e-20
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 98 1e-19
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 98 1e-19
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 97 2e-19
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 97 3e-19
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 96 7e-19
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 94 3e-18
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 91 1e-17
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 91 3e-17
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 89 6e-17
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 89 1e-16
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 89 1e-16
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 89 1e-16
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 88 1e-16
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 87 2e-16
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 86 7e-16
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 85 1e-15
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 84 3e-15
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 83 5e-15
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 83 7e-15
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 83 7e-15
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 82 9e-15
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 82 9e-15
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 82 1e-14
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 82 1e-14
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 81 2e-14
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 81 2e-14
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 81 3e-14
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 81 3e-14
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 77 3e-13
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 75 1e-12
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 75 1e-12
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 75 1e-12
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 73 7e-12
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 73 7e-12
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 69 1e-10
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 69 1e-10
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 68 2e-10
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 68 2e-10
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 65 1e-09
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 7e-08
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 59 1e-07
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 58 2e-07
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 56 5e-07
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 52 1e-05
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 49 1e-04
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 48 1e-04
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 47 3e-04
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 46 0.001
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 42 0.009
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 40 0.036
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 38 0.19
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 34 3.1
UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7; Locu... 34 3.1
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 33 4.2
UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2; ... 33 7.3
UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3; ... 33 7.3
UniRef50_Q8ID15 Cluster: Putative uncharacterized protein MAL13P... 32 9.6
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 32 9.6
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 232 bits (567), Expect = 6e-60
Identities = 121/196 (61%), Positives = 129/196 (65%)
Frame = +2
Query: 5 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 184
QIYNTIVTAHA N L+PL+LGAPD+AFPR+NN+ F
Sbjct: 25 QIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNNMSFWLLPPSLIL 84
Query: 185 XXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXX 364
IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS
Sbjct: 85 LISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINM 144
Query: 365 XXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY 544
SFDQ+PLF+ AVGITA AGAIT+LLTDRNLNTSFFDPAGGGDPILY
Sbjct: 145 RINKMSFDQMPLFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILY 204
Query: 545 QHLF*FFGHPEVYILI 592
QHLF FFGHPEVYILI
Sbjct: 205 QHLFWFFGHPEVYILI 220
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 225 bits (550), Expect = 7e-58
Identities = 118/192 (61%), Positives = 126/192 (65%)
Frame = +2
Query: 5 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 184
QIYNTIVTAHA N LVPL+LGAPD+AFPR+NN+ F
Sbjct: 49 QIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPSLTL 108
Query: 185 XXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXX 364
IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS
Sbjct: 109 LISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINM 168
Query: 365 XXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY 544
SFDQ+PLFV AVGITAF AGAIT+LLTDRNLNTSFFDPAGGGDPILY
Sbjct: 169 RMNNLSFDQMPLFVWAVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILY 228
Query: 545 QHLF*FFGHPEV 580
QHLF FFGHP++
Sbjct: 229 QHLFWFFGHPKL 240
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 219 bits (535), Expect = 4e-56
Identities = 117/205 (57%), Positives = 128/205 (62%)
Frame = +2
Query: 5 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 184
QIYN IVTAHA N LVPL++GAPD+AFPR+NN+ F
Sbjct: 53 QIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLXPPSFLL 112
Query: 185 XXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXX 364
VE GAGTG TVYPPL+ N+AH G SVDLAIFSLHLAGISS
Sbjct: 113 LLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTAINM 172
Query: 365 XXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY 544
S Q PLFV +V ITA A IT+LLTDRNLNT+FFDPAGGGDPILY
Sbjct: 173 KPPAISQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILY 232
Query: 545 QHLF*FFGHPEVYILILPGFGIIXH 619
QHLF FFGHPEVYILILPGFG+I H
Sbjct: 233 QHLFWFFGHPEVYILILPGFGMISH 257
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 218 bits (532), Expect = 1e-55
Identities = 115/205 (56%), Positives = 126/205 (61%)
Frame = +2
Query: 5 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 184
QIYN IVTAHA N LVPL++GAPD+AFPR+NN+ F
Sbjct: 52 QIYNVIVTAHAFVMIFFMVMPILIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLL 111
Query: 185 XXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXX 364
VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS
Sbjct: 112 LLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINM 171
Query: 365 XXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY 544
S Q PLFV AV +TA A IT+LLTDRNLNT+FFDPAGGGDPILY
Sbjct: 172 KPPTISQYQTPLFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILY 231
Query: 545 QHLF*FFGHPEVYILILPGFGIIXH 619
QHLF FFGHPEVYILILPGFGII H
Sbjct: 232 QHLFWFFGHPEVYILILPGFGIISH 256
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 216 bits (527), Expect = 4e-55
Identities = 109/205 (53%), Positives = 127/205 (61%)
Frame = +2
Query: 5 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 184
Q+YN I+TAHA N LVP+++GAPD+AFPR+NNI F
Sbjct: 52 QLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLIL 111
Query: 185 XXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXX 364
VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS
Sbjct: 112 LLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNM 171
Query: 365 XXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY 544
+ +LPLFV A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILY
Sbjct: 172 RNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILY 231
Query: 545 QHLF*FFGHPEVYILILPGFGIIXH 619
QHLF FFGHPEVYILI+PGFG++ H
Sbjct: 232 QHLFWFFGHPEVYILIIPGFGMVSH 256
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 215 bits (526), Expect = 5e-55
Identities = 108/205 (52%), Positives = 128/205 (62%)
Frame = +2
Query: 5 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 184
Q+YN ++TAHA N VP+++GAPD+AFPR+NNI F
Sbjct: 55 QLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPILIGAPDMAFPRLNNISFWLLPPSLLL 114
Query: 185 XXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXX 364
+VE G+GTG TVYPPLS +H G +VDLAIFSLHL+G+SS
Sbjct: 115 LLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSGVSSILGSINFITTIFNM 174
Query: 365 XXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY 544
+ +LPLFV +V +TAF AGAIT+LLTDRN NT+FFDPAGGGDPILY
Sbjct: 175 RGPGMTMHRLPLFVWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILY 234
Query: 545 QHLF*FFGHPEVYILILPGFGIIXH 619
QHLF FFGHPEVYILILPGFGII H
Sbjct: 235 QHLFWFFGHPEVYILILPGFGIISH 259
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 214 bits (522), Expect = 2e-54
Identities = 112/205 (54%), Positives = 126/205 (61%)
Frame = +2
Query: 5 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 184
QIYN IVTAHA N LVPL++GAPD+AFPR+NN+ F
Sbjct: 52 QIYNVIVTAHAFVMIFFMVMPVMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLL 111
Query: 185 XXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXX 364
VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS
Sbjct: 112 LLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINM 171
Query: 365 XXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY 544
+ Q PLFV +V +TA A IT+LLTDRNLNT+FFDPAGGGDPILY
Sbjct: 172 KPPAITQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILY 231
Query: 545 QHLF*FFGHPEVYILILPGFGIIXH 619
QHLF FFGHPEVYILILPGFG+I H
Sbjct: 232 QHLFWFFGHPEVYILILPGFGMISH 256
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 211 bits (516), Expect = 9e-54
Identities = 111/204 (54%), Positives = 125/204 (61%)
Frame = +2
Query: 8 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXX 187
IYN IVTAHA N LVPL++GAPD+AFPR+NN+ F
Sbjct: 53 IYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLL 112
Query: 188 XXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXX 367
+VE GAGTG TVYPPL+ N +H G SVDL IFSLHLAG+SS
Sbjct: 113 LASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMK 172
Query: 368 XXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQ 547
+ Q PLFV +V ITA A IT+LLTDRNLNT+FFDPAGGGDPILYQ
Sbjct: 173 PPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQ 232
Query: 548 HLF*FFGHPEVYILILPGFGIIXH 619
HLF FFGHPEVYILILPGFG+I H
Sbjct: 233 HLFWFFGHPEVYILILPGFGMISH 256
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 208 bits (508), Expect = 8e-53
Identities = 106/205 (51%), Positives = 127/205 (61%)
Frame = +2
Query: 5 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 184
QIYN ++TAHA N LVP+++G+PD+AFPR+NNI F
Sbjct: 60 QIYNVLITAHAFLMIFFMVMPVMIGGFGNWLVPIMIGSPDMAFPRLNNISFWLLPPSLCL 119
Query: 185 XXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXX 364
+VE G GTG TVYPPLSS +H G +VDLAIFSLH++G SS
Sbjct: 120 LLMSALVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHISGASSILGAVNFISTILNM 179
Query: 365 XXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY 544
S ++PLFV ++ +TAF AGAIT+LLTDRN NTSFFD +GGGDPILY
Sbjct: 180 RSPGQSMYRIPLFVWSILVTAFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGGDPILY 239
Query: 545 QHLF*FFGHPEVYILILPGFGIIXH 619
QHLF FFGHPEVYILILPGFG+I H
Sbjct: 240 QHLFWFFGHPEVYILILPGFGMISH 264
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 206 bits (503), Expect = 3e-52
Identities = 106/205 (51%), Positives = 124/205 (60%)
Frame = +2
Query: 5 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 184
QIYN+IVT+HA N L+PL+LG+PD++FPR+NN+ F
Sbjct: 36 QIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFPRMNNMSFWLLIPSLLL 95
Query: 185 XXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXX 364
+ G GTG TVYPPLS + H G SVDL IFSLHLAG SS
Sbjct: 96 LILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAGASSIMGAVNFITTILNM 155
Query: 365 XXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY 544
+ D++ LF +V ITA AGAIT+LLTDRN+NTSFFDP+GGGDPILY
Sbjct: 156 RSNLFNMDKMSLFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNTSFFDPSGGGDPILY 215
Query: 545 QHLF*FFGHPEVYILILPGFGIIXH 619
QHLF FFGHPEVYILILPGFGII H
Sbjct: 216 QHLFWFFGHPEVYILILPGFGIISH 240
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 196 bits (479), Expect = 3e-49
Identities = 102/205 (49%), Positives = 121/205 (59%)
Frame = +2
Query: 5 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 184
Q++N +V HA N L+PL++GA D AFPRINNI F
Sbjct: 53 QLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAFPRINNIAFWVLPMGLVC 112
Query: 185 XXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXX 364
+VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL ISS
Sbjct: 113 LVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNM 172
Query: 365 XXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY 544
+ +LPLFV ++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY
Sbjct: 173 RTNGMTMHKLPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILY 232
Query: 545 QHLF*FFGHPEVYILILPGFGIIXH 619
+HLF FFGHPEVYILI+PGFGII H
Sbjct: 233 EHLFWFFGHPEVYILIIPGFGIISH 257
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 194 bits (474), Expect = 1e-48
Identities = 100/205 (48%), Positives = 120/205 (58%)
Frame = +2
Query: 5 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 184
Q++N +V HA N ++PL++GA D++FPRIN+I F
Sbjct: 53 QLFNVLVVGHAVLMIFFLAMPALIGGFGNYMLPLMIGATDMSFPRINSIGFWLLPMGLVC 112
Query: 185 XXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXX 364
+VE+GAGTG TVYPPLSS AH G SVDLAIFSLHL ISS
Sbjct: 113 LVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTSISSLLGAINFIVTTLNM 172
Query: 365 XXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY 544
S ++PLFV A+ ITAF + IT+LL DRN NTSFF+ AGGGDPI Y
Sbjct: 173 RTNGMSMHKMPLFVWAIFITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFY 232
Query: 545 QHLF*FFGHPEVYILILPGFGIIXH 619
QH F FFGHPEVYILI+PGFGI+ H
Sbjct: 233 QHAFWFFGHPEVYILIIPGFGIVSH 257
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 193 bits (470), Expect = 3e-48
Identities = 102/203 (50%), Positives = 118/203 (58%)
Frame = +2
Query: 5 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 184
Q+YN+I+TAHA N L+PL LG PD+ FPR+NNI +
Sbjct: 53 QLYNSIITAHAIIMIFFMVMPALIGGFGNFLLPLGLGGPDMGFPRLNNISYLLLIPSIVL 112
Query: 185 XXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXX 364
+ENG GTG T+YPPLS +H G SVDLAIF LHL+GISS
Sbjct: 113 FLFAGGIENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSGISSLLGAMNFMTTTFNM 172
Query: 365 XXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY 544
+L LF AV ITA AG IT++LTDRN NTSFF+ AGGGDPILY
Sbjct: 173 RSPGIRLHKLILFAWAVVITAVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPILY 232
Query: 545 QHLF*FFGHPEVYILILPGFGII 613
QHLF FFGHPEVYILI+PGFGII
Sbjct: 233 QHLFWFFGHPEVYILIIPGFGII 255
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 191 bits (466), Expect = 1e-47
Identities = 102/181 (56%), Positives = 120/181 (66%)
Frame = -1
Query: 555 NKC*YKIGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDI 376
NKC + IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K AV T TN G S I
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSMVI 59
Query: 375 LFNRXXXXXXXXXXXXXIDEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTIL 196
+R I+E PAKC+EKI STD P CAI SGG TVHPVP P STI
Sbjct: 60 PADRMLITVVMKFTAPKIEETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIP 119
Query: 195 LEINNIREGGRSQNLILFIRGNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIV 16
L + ++EGG +QNL+LFIRGNA+SGAP++ GTNQFPNPP KA AVT+
Sbjct: 120 LNKSKVKEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMT 179
Query: 15 L 13
L
Sbjct: 180 L 180
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 187 bits (455), Expect = 2e-46
Identities = 96/203 (47%), Positives = 117/203 (57%)
Frame = +2
Query: 5 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 184
Q+YN+I+T+H N L+P+++G PD+AFPR+NN+ +
Sbjct: 79 QLYNSIITSHGVIMIFFMVMPALIGGFGNFLLPILIGGPDMAFPRLNNVSYWLLIPSLFL 138
Query: 185 XXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXX 364
I+ENG GTG T+YPPLS +H VDL IF LHL+GISS
Sbjct: 139 FVFAAIIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSGISSLLGAINFIATLLNM 198
Query: 365 XXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY 544
+L LF AV ITA A AIT+LLTDRNLNTSF++ AGGGD ILY
Sbjct: 199 RSPGIKLHKLALFGWAVVITAVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGGDAILY 258
Query: 545 QHLF*FFGHPEVYILILPGFGII 613
QHLF FFGHPEVYILI+PGFGII
Sbjct: 259 QHLFWFFGHPEVYILIIPGFGII 281
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 186 bits (453), Expect = 4e-46
Identities = 95/203 (46%), Positives = 110/203 (54%)
Frame = +2
Query: 11 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXX 190
YN I T H N VP+++GAPD++FPR+NN F
Sbjct: 58 YNMITTVHGVLMLFVVVMPILFGGFGNYFVPILIGAPDMSFPRLNNFSFWLLPGAILLAV 117
Query: 191 XXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXX 370
E G GTG TVYPPLSS +H G SVDL IFS HL GI S
Sbjct: 118 LATYSEGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVGIGSIVAAINFICTIFYYKN 177
Query: 371 XXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 550
LPLFV +V +T+F A AIT+LL DRN NTSF+DP GGGD +LYQH
Sbjct: 178 EAMFNKDLPLFVWSVAVTSFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQH 237
Query: 551 LF*FFGHPEVYILILPGFGIIXH 619
LF FFGHPEVYILILPGFG++ H
Sbjct: 238 LFWFFGHPEVYILILPGFGLVSH 260
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 181 bits (440), Expect = 1e-44
Identities = 96/184 (52%), Positives = 108/184 (58%)
Frame = +2
Query: 5 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 184
Q+YN +VTAHA N LVPL+LGAPD+AFPR+NN+ F
Sbjct: 35 QLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRLNNMSFWFLPPSLSL 94
Query: 185 XXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXX 364
VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG+SS
Sbjct: 95 LLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAGVSSILGAVNFITTVINM 154
Query: 365 XXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY 544
+ + LFV +V ITA AGAIT+LLTDRN NTSFFDPAGGGDPILY
Sbjct: 155 RWGAMKIELVSLFVWSVKITAILLLLSLPVLAGAITMLLTDRNFNTSFFDPAGGGDPILY 214
Query: 545 QHLF 556
QHLF
Sbjct: 215 QHLF 218
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 178 bits (434), Expect = 8e-44
Identities = 95/187 (50%), Positives = 110/187 (58%)
Frame = +2
Query: 8 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXX 187
+YN IVTAHA N VPL++GAPD+AFPR+NNI F
Sbjct: 54 LYNVIVTAHAFVMIFFLVMPTMIGGFGNWFVPLMIGAPDMAFPRLNNISFWLLPPALFLL 113
Query: 188 XXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXX 367
+VE GAGTG TVYPPL+S AH G SVD+AIFSLHLAG+SS
Sbjct: 114 LGSSLVEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLAGLSSILGAMNFITTVMNMR 173
Query: 368 XXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQ 547
+ ++PLFV +V ITA AGAIT+LLTDR NT+FFDPAGGGDPILYQ
Sbjct: 174 TPGMTMSRIPLFVWSVLITAILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGGGDPILYQ 233
Query: 548 HLF*FFG 568
HLF FFG
Sbjct: 234 HLFWFFG 240
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 178 bits (433), Expect = 1e-43
Identities = 84/204 (41%), Positives = 117/204 (57%)
Frame = +2
Query: 8 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXX 187
++N ++T H N +PL++GAPD+AFPR+NN+ +
Sbjct: 159 LWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFPRLNNLSYWMYVAGTCLA 218
Query: 188 XXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXX 367
+++ GAG G T YPP+S+ R+VD AIF++H++G SS
Sbjct: 219 FCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGASSILGSINFITTFLNMR 278
Query: 368 XXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQ 547
+ ++PLF +V +TA+ AGAIT+LLTDRN T+FFDPAGGGDPIL+Q
Sbjct: 279 APGMTLHKVPLFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNFGTTFFDPAGGGDPILFQ 338
Query: 548 HLF*FFGHPEVYILILPGFGIIXH 619
H+F FFGHPEVYI+ILP FG+I H
Sbjct: 339 HIFWFFGHPEVYIVILPAFGVISH 362
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 177 bits (431), Expect = 2e-43
Identities = 93/184 (50%), Positives = 108/184 (58%)
Frame = +2
Query: 5 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 184
Q+YN I+TAHA N LVP+++GAPD+AFPR+NNI F
Sbjct: 52 QLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLIL 111
Query: 185 XXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXX 364
VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS
Sbjct: 112 LLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNM 171
Query: 365 XXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY 544
+ +LPLFV A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILY
Sbjct: 172 RNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILY 231
Query: 545 QHLF 556
QHLF
Sbjct: 232 QHLF 235
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 176 bits (429), Expect = 3e-43
Identities = 87/203 (42%), Positives = 118/203 (58%)
Frame = +2
Query: 5 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 184
Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 70 QLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAFVVLLPSMLF 129
Query: 185 XXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXX 364
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 130 AVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINM 189
Query: 365 XXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY 544
+ +LPLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY
Sbjct: 190 RANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLY 249
Query: 545 QHLF*FFGHPEVYILILPGFGII 613
+H+F FFGHPEVYILI+P FG++
Sbjct: 250 EHIFWFFGHPEVYILIVPVFGVV 272
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 176 bits (429), Expect = 3e-43
Identities = 87/203 (42%), Positives = 118/203 (58%)
Frame = +2
Query: 5 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 184
Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 70 QLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAFVVLLPSMLF 129
Query: 185 XXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXX 364
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 130 AVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINM 189
Query: 365 XXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY 544
+ +LPLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY
Sbjct: 190 RANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLY 249
Query: 545 QHLF*FFGHPEVYILILPGFGII 613
+H+F FFGHPEVYILI+P FG++
Sbjct: 250 EHIFWFFGHPEVYILIVPVFGVV 272
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 174 bits (423), Expect = 2e-42
Identities = 94/206 (45%), Positives = 117/206 (56%), Gaps = 4/206 (1%)
Frame = +2
Query: 8 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXX 187
++N ++TAH N VP+++GAPD+AFPR+NNI F
Sbjct: 93 LWNVLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPRMNNISFWLLIPAFALL 152
Query: 188 XXXXIVE----NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXX 355
V NGAGTG TVY PLS++ G +VD+AI SLH+AG SS
Sbjct: 153 LGSTFVPGGTGNGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTI 211
Query: 356 XXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 535
+ ++PLFV +V +TAF A AIT+LLTDRN T+F+D AGGGDP
Sbjct: 212 LNMRAPGMTLHKMPLFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDP 271
Query: 536 ILYQHLF*FFGHPEVYILILPGFGII 613
LYQHLF FFGHPEVYI+ILPGFGII
Sbjct: 272 ELYQHLFWFFGHPEVYIMILPGFGII 297
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 171 bits (416), Expect = 1e-41
Identities = 94/207 (45%), Positives = 115/207 (55%), Gaps = 4/207 (1%)
Frame = +2
Query: 5 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 184
Q+YN+I+TAHA N L+PL++G PD+AFPR+NNI F
Sbjct: 81 QLYNSIITAHAILMIFFMVMPALIGGFGNFLMPLMIGGPDMAFPRLNNISFWLLPPSLLL 140
Query: 185 XXXXXIVENGAGTG*TV----YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXX 352
I+E G GTG T+ YPPLS +H G SVDLAIF+LHL+G+SS
Sbjct: 141 LVFSAIIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFALHLSGVSSLLGSINFITT 200
Query: 353 XXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGD 532
+L LF + IT++LTDRN NTSFF+ AGGGD
Sbjct: 201 VANMRTPGIKLHKLALF-------GWATWSSRSRYFLGITMVLTDRNFNTSFFEVAGGGD 253
Query: 533 PILYQHLF*FFGHPEVYILILPGFGII 613
PIL+QHLF FFGHPEVYILI+PGFGII
Sbjct: 254 PILFQHLFWFFGHPEVYILIIPGFGII 280
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 164 bits (399), Expect = 1e-39
Identities = 89/197 (45%), Positives = 109/197 (55%)
Frame = +2
Query: 5 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 184
Q++N +V HA N L+PL++GA D AFPRINNI F
Sbjct: 53 QLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAFPRINNIAFWVLPMGLVC 112
Query: 185 XXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXX 364
+VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL ISS
Sbjct: 113 LVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNM 172
Query: 365 XXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY 544
+ +LPLFV ++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY
Sbjct: 173 RTNGMTMHKLPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILY 232
Query: 545 QHLF*FFGHPEVYILIL 595
+HLF FFG I++L
Sbjct: 233 EHLFWFFGQTVATIIML 249
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 161 bits (390), Expect = 2e-38
Identities = 87/156 (55%), Positives = 96/156 (61%)
Frame = +2
Query: 104 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 283
L LGAPD FPR N+ F VE GAGTG TV PPLS+NIAH G SVD
Sbjct: 4 LXLGAPDXXFPRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVD 63
Query: 284 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 463
LAIFSLH+AG+ S + ++PLFV AV ITA AG
Sbjct: 64 LAIFSLHMAGVXSILGAINFISTVLNMRPSGMTPXRMPLFVWAVEITAILLLLSLPVLAG 123
Query: 464 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 571
AIT+LLTDRN+NTSFFDPAGGGDPILYQHLF F GH
Sbjct: 124 AITMLLTDRNINTSFFDPAGGGDPILYQHLFWFXGH 159
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 157 bits (382), Expect = 2e-37
Identities = 84/188 (44%), Positives = 104/188 (55%)
Frame = +2
Query: 5 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 184
Q++N +V HA N ++PL++GA D AFPRINNI F
Sbjct: 53 QLFNVLVVGHAILMIFFMVMPALIGGFGNYMLPLMIGATDTAFPRINNIGFWLLPMGLVC 112
Query: 185 XXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXX 364
+VE+GAGTG TVYPPL+S AH G SVDLAIF+LH+ ISS
Sbjct: 113 LVTSTLVESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMTSISSLLGAINFIVTTLNM 172
Query: 365 XXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY 544
+ +LPLFV A+ ITA + +T+LL DRN NTSFF+ AGGGDPILY
Sbjct: 173 RTNGMTMHKLPLFVWAILITAVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPILY 232
Query: 545 QHLF*FFG 568
+HLF FFG
Sbjct: 233 EHLFWFFG 240
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 152 bits (368), Expect = 7e-36
Identities = 79/199 (39%), Positives = 110/199 (55%), Gaps = 2/199 (1%)
Frame = +2
Query: 5 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 184
Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 70 QLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAFVVLLPSMLF 129
Query: 185 XXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXX 364
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 130 AVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINM 189
Query: 365 XXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY 544
+ +LPLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY
Sbjct: 190 RANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLY 249
Query: 545 QHLF*FFGH--PEVYILIL 595
+H+F FFG P + I+I+
Sbjct: 250 EHIFWFFGQIWPIIIIIII 268
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 151 bits (365), Expect = 2e-35
Identities = 82/197 (41%), Positives = 105/197 (53%)
Frame = +2
Query: 5 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 184
Q +N ++TAHA N L+PL+LGA D+AF R+NNI F
Sbjct: 58 QAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFARLNNISFWLLVPSLIL 117
Query: 185 XXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXX 364
+VE GAGTG TVY PL+ +H G +VDLAIFSLHL+G SS
Sbjct: 118 ILTSALVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFSSLLGAINFITTFINM 177
Query: 365 XXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY 544
++ +PLF AV TA A +T+ + DRN NTSFF+ AGGGD +LY
Sbjct: 178 RTIGMKYENVPLFAWAVLFTAILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGGDAVLY 237
Query: 545 QHLF*FFGHPEVYILIL 595
QHLF ++ HPEV I+ L
Sbjct: 238 QHLFYWWNHPEVKIICL 254
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 147 bits (356), Expect = 2e-34
Identities = 83/171 (48%), Positives = 94/171 (54%)
Frame = +2
Query: 5 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 184
QIYN IVTAHA N L+PL++GAPD+AFPR+NN+ F
Sbjct: 41 QIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLL 100
Query: 185 XXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXX 364
+E GAGTG TVYPPL+ N+AH G SVDL IFSLHLAGISS
Sbjct: 101 LLASSGIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIMNM 160
Query: 365 XXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 517
S Q PLFV AV ITA A IT+LLTDRNLNT+FFDP
Sbjct: 161 KPPAISQYQTPLFVWAVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 146 bits (354), Expect = 4e-34
Identities = 76/203 (37%), Positives = 102/203 (50%)
Frame = +2
Query: 5 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 184
Q+YN+++T H N ++PL+LGAP++AFPR+N + F
Sbjct: 63 QVYNSVLTMHGVLMIFFLVMPILIGGFGNWMLPLMLGAPEMAFPRVNALSFWFTFVALLM 122
Query: 185 XXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXX 364
+ G G+ T YPPLS S+D I LH GI S
Sbjct: 123 VYQSFFIGGGPGSSWTFYPPLSVE-GQPELSLDTMILGLHTVGIGSLLGAINFMVTTQNM 181
Query: 365 XXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY 544
+ DQ+ +FV +T+F AG++ LL DRN NTSF+D GG+P+LY
Sbjct: 182 RSTAVTLDQISMFVWTSYLTSFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGGNPLLY 241
Query: 545 QHLF*FFGHPEVYILILPGFGII 613
QHLF FFGHPEVY++ILP FGII
Sbjct: 242 QHLFWFFGHPEVYVIILPVFGII 264
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 146 bits (354), Expect = 4e-34
Identities = 76/203 (37%), Positives = 101/203 (49%)
Frame = +2
Query: 5 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 184
Q YN ++T+H N +P++ G PD+ FPR+NN+ F
Sbjct: 55 QFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPRLNNMSFWMYLAGFGC 114
Query: 185 XXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXX 364
+ E G G G T+YP L H + D +F++HL GISS
Sbjct: 115 VVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLGISSILNSINLLGTLFCC 174
Query: 365 XXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY 544
SF LF+ A ITA AG +T++L DRN NTSF+D GGGD IL+
Sbjct: 175 RRKFFSFLSWSLFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVGGGDLILF 234
Query: 545 QHLF*FFGHPEVYILILPGFGII 613
QH+F FFGHPEVYI++LP FG+I
Sbjct: 235 QHIFWFFGHPEVYIILLPVFGLI 257
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 144 bits (350), Expect = 1e-33
Identities = 76/205 (37%), Positives = 106/205 (51%), Gaps = 1/205 (0%)
Frame = +2
Query: 8 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXX 187
+Y++I+T HA N +PL++ D++ PR+NN+
Sbjct: 55 MYHSIMTMHAFMMIFFFVMPTSIGGLGNWFIPLMIKIKDLSMPRLNNLSVWLALGSLFLM 114
Query: 188 XXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXX 367
+ G G G T+YPPLS++ G +DLA+FSLH+AG+SS
Sbjct: 115 CMAFLSSGGLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAGMSSIAGSINFLVTIFNMR 174
Query: 368 XXXXSFDQL-PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY 544
F L P+ + + T+ A +T+LL DR+ +TSF+ P GGGDPIL+
Sbjct: 175 MGALFFMSLNPMLIWTLFGTSILLVTSVPVLAAGLTLLLLDRHFSTSFYYPEGGGDPILW 234
Query: 545 QHLF*FFGHPEVYILILPGFGIIXH 619
QHLF FFGHPEVYILILP FG+I H
Sbjct: 235 QHLFWFFGHPEVYILILPAFGVISH 259
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 144 bits (350), Expect = 1e-33
Identities = 80/202 (39%), Positives = 110/202 (54%)
Frame = +2
Query: 5 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 184
Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 70 QLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAFVVLLPSMLF 129
Query: 185 XXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXX 364
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 130 AVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINM 189
Query: 365 XXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY 544
+ +LPLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY
Sbjct: 190 RANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLY 249
Query: 545 QHLF*FFGHPEVYILILPGFGI 610
+H+ F+ +P V ILI GI
Sbjct: 250 EHI--FYKNP-VLILIWLTSGI 268
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 135 bits (326), Expect = 9e-31
Identities = 73/205 (35%), Positives = 102/205 (49%), Gaps = 1/205 (0%)
Frame = +2
Query: 8 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXX 187
+YN I T H N +P++ G+P++A+PRIN+I
Sbjct: 58 LYNMIFTIHGIIMIFFNIMPGLFGGFGNYFLPILCGSPELAYPRINSISLLLQPIAFVLV 117
Query: 188 XXXXIVENGAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLHLAGISSXXXXXXXXXXXXXX 364
E G GTG T+YPPLS+++ +VD+ IF L ++G++S
Sbjct: 118 ILSTAAEFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVSGVASIMSSLNFITTVMHL 177
Query: 365 XXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY 544
+ L + ++ IT+ G + +LL+D + NT FFDP GDPILY
Sbjct: 178 RAKGLTLGILSVSTWSLIITSGMLLLTLPVLTGGVLMLLSDLHFNTLFFDPTFAGDPILY 237
Query: 545 QHLF*FFGHPEVYILILPGFGIIXH 619
QHLF FFGHPEVYILILP FG+I H
Sbjct: 238 QHLFWFFGHPEVYILILPAFGVISH 262
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 130 bits (315), Expect = 2e-29
Identities = 69/203 (33%), Positives = 99/203 (48%)
Frame = +2
Query: 5 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 184
+IYN + T H N L P++LG D+ +PR+N
Sbjct: 60 EIYNLLFTLHGLIMVFFNIMTGLFGGIGNYLYPVLLGYCDVVYPRVNLYSLLFQPIGFVL 119
Query: 185 XXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXX 364
+E G+GTG T+YPPLS+++++ G +D IF L AGI+S
Sbjct: 120 VVSSIYLEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAAGIASTLSSVNFITTFTSV 177
Query: 365 XXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY 544
D++ ++ +T+F ++ DR+ NT FF+ + GDP+LY
Sbjct: 178 KTIGFVIDRISPAAWSIVLTSFLLLLSLPVVTAVFLMVFLDRHYNTMFFESSNSGDPVLY 237
Query: 545 QHLF*FFGHPEVYILILPGFGII 613
QHLF FFGHPEVYI+ILPGFGII
Sbjct: 238 QHLFWFFGHPEVYIMILPGFGII 260
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 128 bits (309), Expect = 1e-28
Identities = 77/204 (37%), Positives = 97/204 (47%)
Frame = +2
Query: 8 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXX 187
+YN +VT H N +P+ L D+ PR+N++
Sbjct: 151 VYNYLVTNHGVAMIFFFLMPILIGGFGNYFLPIFLCLDDLLLPRLNSLSLWLMVPSIFYM 210
Query: 188 XXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXX 367
G G G T+YPPLS G VD +FSLHLAG+SS
Sbjct: 211 ELSLYY--GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSSLIGSVNFISTIFSRL 267
Query: 368 XXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQ 547
S + V A T+ A IT+LL DRN T+FF+P+GGGDPIL+Q
Sbjct: 268 SFNCS-----IIVWAYLFTSVLLLLSLPVLASGITMLLFDRNFGTAFFEPSGGGDPILFQ 322
Query: 548 HLF*FFGHPEVYILILPGFGIIXH 619
HLF FFGHPEVY+LILPGFGI+ H
Sbjct: 323 HLFWFFGHPEVYVLILPGFGIVSH 346
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 119 bits (287), Expect = 5e-26
Identities = 71/201 (35%), Positives = 97/201 (48%)
Frame = +2
Query: 8 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXX 187
+YN VT H N L+P PD+ FPR+N + F
Sbjct: 48 VYNAFVTLHGLVMVFFAAMPTAIGFFANLLIPYHCNLPDLLFPRMNALSFWLMPFSLSL- 106
Query: 188 XXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXX 367
++ + A G T YPPLSS SV+ ++FSLHLAGI+S
Sbjct: 107 ----LLFSMASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIASLISSCNFLVTMLATR 158
Query: 368 XXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQ 547
+ L LF ++ + + A IT++LTD++L T F+D GGDP+LYQ
Sbjct: 159 TSL--WYSLSLFCWSIVLVSLLLVLSLPVLAVGITLILTDKHLGTCFYDATMGGDPLLYQ 216
Query: 548 HLF*FFGHPEVYILILPGFGI 610
HLF FFGHPEVY++ILP FG+
Sbjct: 217 HLFWFFGHPEVYVVILPVFGL 237
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 117 bits (282), Expect = 2e-25
Identities = 69/207 (33%), Positives = 93/207 (44%), Gaps = 6/207 (2%)
Frame = +2
Query: 11 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXX 190
Y I T H N L+PL++GA D+AFPR+N F
Sbjct: 86 YQQIFTTHGLVMIFFAVTPVLIGTFGNLLIPLMIGARDMAFPRLNMYSFWTFLLSQLLVL 145
Query: 191 XXXIVENG-AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXX 367
G AG G T Y PLS+N+ G L + ++ + G+SS
Sbjct: 146 ASFFAPLGSAGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSSTMGAVNYITTVIRLR 205
Query: 368 XXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA-----GGGD 532
++ +LPL + + +TA A +LL DR+ T FF GGGD
Sbjct: 206 APGMTYMRLPLTIWGLWLTAILNALFVPVLGSAALLLLLDRSFGTEFFVAGASAVRGGGD 265
Query: 533 PILYQHLF*FFGHPEVYILILPGFGII 613
PIL+QHLF FGHPEVYI+ILP +GI+
Sbjct: 266 PILWQHLFWIFGHPEVYIMILPAWGIL 292
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 115 bits (277), Expect = 8e-25
Identities = 65/153 (42%), Positives = 78/153 (50%)
Frame = +2
Query: 5 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 184
Q+YN I+TAHA N LVP+++GAPD+AFPR+NNI F
Sbjct: 52 QLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLIL 111
Query: 185 XXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXX 364
VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS
Sbjct: 112 LLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNM 171
Query: 365 XXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 463
+ +LPLFV A+ +TA AG
Sbjct: 172 RNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAG 204
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 113 bits (272), Expect = 3e-24
Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 2/203 (0%)
Frame = +2
Query: 8 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXX 187
IYN +T H N L+P+++G +++ PR+N I F
Sbjct: 63 IYNNWITIHGLIMLFVFIMPVGIGFYGNYLIPMLIGTSELSMPRMNGISFWMLIVGVVIF 122
Query: 188 XXXXIV-ENGAGTG*TVYPPLSSNIAHR-GRSVDLAIFSLHLAGISSXXXXXXXXXXXXX 361
++ +G T+YPPLS+ A G ++DL++ +H+ GISS
Sbjct: 123 VISNVLMSKPISSGWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISSTIGSVNYITTNKY 182
Query: 362 XXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPIL 541
+F + ++ ++ +T+ AIT LL DRN+N++ +D G DP+L
Sbjct: 183 NRHVGLTFMNINIYNFSIIVTSILLIGSLPILGVAITGLLLDRNINSTIYDVIG--DPVL 240
Query: 542 YQHLF*FFGHPEVYILILPGFGI 610
YQHLF FFGHPEVY++ILP FG+
Sbjct: 241 YQHLFWFFGHPEVYVIILPVFGL 263
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 113 bits (271), Expect = 4e-24
Identities = 64/175 (36%), Positives = 84/175 (48%)
Frame = +2
Query: 89 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 268
N VPL++GA D+AFPR+N+ F + + G Y PLSS
Sbjct: 99 NYFVPLMIGARDVAFPRLNSFGFWMFFFGAALLHFSFLTGSAPNAGWFSYVPLSSKAYSS 158
Query: 269 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 448
+ VD I L + GI S S ++PLFV + + A
Sbjct: 159 LQGVDYWIIGLLIMGIGSVSGAINIFATIINLRAPGMSLQRVPLFVWMMLMQAILIILAL 218
Query: 449 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGII 613
A+ +LL DR L ++FFDP GG +L+QH F FGHPEVYILILPGFG+I
Sbjct: 219 PALNSALAMLLIDRWLGSAFFDPTRGGSAVLWQHYFWIFGHPEVYILILPGFGMI 273
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 109 bits (262), Expect = 5e-23
Identities = 64/199 (32%), Positives = 91/199 (45%)
Frame = +2
Query: 11 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXX 190
YN ++T H N L+PL++GA D+AFPR+N + +
Sbjct: 12 YNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRLNALSWWAFFAANVLFL 71
Query: 191 XXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXX 370
I N T T YPP S N + L +F +HL G SS
Sbjct: 72 MTLIPGNHIMTMWTGYPPFSLN--NDAGVTALYVFVMHLLGASSIATAVNFLVTYITMRA 129
Query: 371 XXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 550
+F + LFV + AGA+T+L D+ L T+FF+PA GGDP++YQ+
Sbjct: 130 PGYTFFKTNLFVHTLIAANVIQLVGVPSLAGAVTMLFLDKYLGTNFFNPAKGGDPLIYQN 189
Query: 551 LF*FFGHPEVYILILPGFG 607
+F F+ HP VY+ +LP FG
Sbjct: 190 IFWFYSHPVVYVQVLPVFG 208
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 109 bits (262), Expect = 5e-23
Identities = 69/203 (33%), Positives = 91/203 (44%)
Frame = +2
Query: 5 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 184
++YN ++T H N L+PL++G D+AFPR+N + F
Sbjct: 67 EMYNQLMTLHGTIMIFLWIVPAGAAFA-NYLIPLMVGTEDMAFPRLNAVAFWLTPPGGIL 125
Query: 185 XXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXX 364
V G T YPPLS G +L I SL L G SS
Sbjct: 126 LISSFFV-GAPQAGWTSYPPLSLLSGKWGE--ELWILSLLLVGTSSILGAINFVTTILKM 182
Query: 365 XXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY 544
+PLF A+ T+ A A+ +L D TSFF+P GGGDP++Y
Sbjct: 183 RIKDMDLHSMPLFCWAMLATSSLILLSTPVLASALILLSFDLIAGTSFFNPVGGGDPVVY 242
Query: 545 QHLF*FFGHPEVYILILPGFGII 613
QHLF F+ HP VYI+ILP FG+I
Sbjct: 243 QHLFWFYSHPAVYIMILPFFGVI 265
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 107 bits (258), Expect = 2e-22
Identities = 77/211 (36%), Positives = 100/211 (47%), Gaps = 8/211 (3%)
Frame = +2
Query: 11 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXX--XXXXXX 184
YN+++T+H N L+PL++GA D+AFPRIN I F
Sbjct: 136 YNSLLTSHGITMLFLFATPIIAAFS-NYLIPLLIGADDMAFPRINAIAFWLLPPAALLIW 194
Query: 185 XXXXXIVEN-GAGTG*TVYPPLS-----SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXX 346
I E A TG T+Y PLS N A+ G VDL + LHL+G+S+
Sbjct: 195 AGFFPIPEVIPAQTGWTMYTPLSVGEGMGNQANAG--VDLMLLGLHLSGVSATMGSINFI 252
Query: 347 XXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGG 526
S+ L +F + + AI +LL DRN TSFF AG
Sbjct: 253 ATIFTERGKNVSWANLDIFSWTILTQSGLILFAFPLLGSAIMMLLFDRNFGTSFF--AGE 310
Query: 527 GDPILYQHLF*FFGHPEVYILILPGFGIIXH 619
G IL+QHLF FFGHPEVYI++LP GII +
Sbjct: 311 GGAILWQHLFWFFGHPEVYIIVLPPMGIISY 341
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 105 bits (252), Expect = 9e-22
Identities = 59/173 (34%), Positives = 83/173 (47%)
Frame = +2
Query: 95 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 274
LVPL++G IAFPR+N + V+ G G Y PLS G+
Sbjct: 98 LVPLMVGTRHIAFPRLNAFSYWMYLAGGLLLWIAFAVDTGPDIGWFAYVPLSGPQYAAGK 157
Query: 275 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 454
D+ + +S+ S D++PLFV ++ +T+F
Sbjct: 158 RADIWAQMITFTEVSALAIAVEIVVTVFKQRAPGMSLDRIPLFVWSMLVTSFLVILAMPA 217
Query: 455 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGII 613
A T L+ DR + T FF+PA GGD +L+QHLF FFGHPEVYI+ LP G++
Sbjct: 218 IMIASTSLILDRLVGTHFFNPAEGGDVLLWQHLFWFFGHPEVYIIFLPAVGMV 270
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 104 bits (249), Expect = 2e-21
Identities = 65/204 (31%), Positives = 94/204 (46%), Gaps = 2/204 (0%)
Frame = +2
Query: 8 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXX 187
+YN ++T+H N +PL++ A D+AFPRIN I F
Sbjct: 109 LYNGLLTSHGITMLFLFGTPMIAAFG-NYFIPLLIDADDMAFPRINAIAFWLLPPGAILI 167
Query: 188 XXXXIVEN--GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXX 361
++ A T T+Y PLS ++ +VD+ + LHL G+S+
Sbjct: 168 WSGFLIPGIATAQTSWTMYTPLSLQMS--SPAVDMMMLGLHLTGVSATMGAINFIATIFT 225
Query: 362 XXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPIL 541
+ L +F + + A+ +LL DRN T+FF AGG DPI
Sbjct: 226 ERGEDVGWPDLDIFSWTMLTQSGLILFAFPLFGSALIMLLLDRNFGTTFFTVAGG-DPIF 284
Query: 542 YQHLF*FFGHPEVYILILPGFGII 613
+QHLF FFGHPEVY+L+LP GI+
Sbjct: 285 WQHLFWFFGHPEVYVLVLPPMGIV 308
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 103 bits (248), Expect = 3e-21
Identities = 60/177 (33%), Positives = 83/177 (46%), Gaps = 3/177 (1%)
Frame = +2
Query: 89 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLS--SNI 259
N L+P ++GAPD+AFP++N F G A +G YPP+S + +
Sbjct: 103 NLLIPTMIGAPDMAFPKLNAAAFWLVPVFSIVLMGSFFAPGGPASSGWWSYPPMSLQNPL 162
Query: 260 AHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXX 439
H L I ++ L+GISS F ++P+FV
Sbjct: 163 GHFINGEFLWILAVALSGISSIMGAINFVTTIIRMRAPGMGFFRMPVFVWTAWAAQTIQL 222
Query: 440 XXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGI 610
G +LL D + TSFF P GGGDP+L+QH F F+ HP VY+L+LP FGI
Sbjct: 223 IGLPALTGGAVMLLFDLSFGTSFFRPEGGGDPVLFQHFFWFYSHPAVYVLVLPVFGI 279
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 103 bits (246), Expect = 5e-21
Identities = 66/202 (32%), Positives = 86/202 (42%)
Frame = +2
Query: 8 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXX 187
+YN + T H N +VPL++GA D+AFPR+N +
Sbjct: 72 VYNQMFTMHGTTMIFLGLMPLNVGLG-NYMVPLMIGARDMAFPRLNALSIWLFIFGGLML 130
Query: 188 XXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXX 367
V G Y PL+ VD I + L G++S
Sbjct: 131 YVSFFVGGAPNVGWFAYAPLTQKQFAPTAGVDYWIVGIGLTGVASIAGALNFIVTILNMR 190
Query: 368 XXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQ 547
+ +++PLFV + AF A LL DR+ T FF P GGD +L+Q
Sbjct: 191 APGMTLNRMPLFVWMQLVVAFILIFAFPVLTVATIQLLFDRHFGTRFFLPNLGGDAVLWQ 250
Query: 548 HLF*FFGHPEVYILILPGFGII 613
HLF FFGHPEVYILILP GII
Sbjct: 251 HLFWFFGHPEVYILILPTMGII 272
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 102 bits (245), Expect = 6e-21
Identities = 64/202 (31%), Positives = 91/202 (45%), Gaps = 1/202 (0%)
Frame = +2
Query: 11 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXX 190
YN T H N ++PL+LGA D+AFPR+N +
Sbjct: 84 YNRTFTLHGLVMIFLFMIPAIPAVFGNFMLPLMLGAKDVAFPRLNLLSLYIYLAGAVLAL 143
Query: 191 XXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXX 370
++ G TG T Y P S AH +V +F + G SS
Sbjct: 144 WG-MLNGGLDTGWTFYTPYS---AHTTTTVAPVLFGAFIIGFSSIVTGINFIVTCHTMRA 199
Query: 371 XXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL-NTSFFDPAGGGDPILYQ 547
++ ++PLFV A+ T+ G + +L+T NL FDPA GGDP+L+Q
Sbjct: 200 PGITWFKMPLFVWAIYATSCIQVLATPVI-GLLLVLVTVENLFGFGMFDPARGGDPVLFQ 258
Query: 548 HLF*FFGHPEVYILILPGFGII 613
HLF F+ HP VYI++LP FG++
Sbjct: 259 HLFWFYSHPAVYIMVLPSFGVM 280
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 100 bits (239), Expect = 3e-20
Identities = 61/181 (33%), Positives = 86/181 (47%), Gaps = 6/181 (3%)
Frame = +2
Query: 89 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV-ENGAGTG*TVYPPLSSNIAH 265
N LVP ++GAPD+ +PRIN + F + ++G G T+YPPLS+
Sbjct: 86 NILVPKLIGAPDMYWPRINALSFWMQVPATVFMWSSLLFWQHGDSIGWTLYPPLST--IS 143
Query: 266 RGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXX 445
+ VDL + + +AG SS + LF +V +
Sbjct: 144 KSIGVDLILLGIIIAGFSSTLTGINFILTITRLRRPDIKMLDMSLFAWSVLAASMLMVTA 203
Query: 446 XXXXAGAITILLTDRNLNTSFF-----DPAGGGDPILYQHLF*FFGHPEVYILILPGFGI 610
A +LL +R+L FF DPA GDP L+QH+F FFGHPEVYIL+LP G+
Sbjct: 204 LPPLAAGAIMLLLERHLGMHFFTPVPGDPAASGDPRLFQHIFWFFGHPEVYILVLPAMGL 263
Query: 611 I 613
+
Sbjct: 264 V 264
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 100 bits (239), Expect = 3e-20
Identities = 59/176 (33%), Positives = 81/176 (46%), Gaps = 1/176 (0%)
Frame = +2
Query: 89 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT-G*TVYPPLSSNIAH 265
N ++PL +GAPD+AFPR+N F + GA G T+Y PLS I
Sbjct: 105 NYVLPLQIGAPDVAFPRLNAFGFWITTVGGVAMLTGFLTPGGAADFGWTMYSPLSDAIHS 164
Query: 266 RGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXX 445
G D+ I + GI S + ++P+F + + +
Sbjct: 165 PGLGSDMWIVGVGATGIGSVASAINMLTTILCLRAPGMTMFRMPIFTWNIFVVSVLALLI 224
Query: 446 XXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGII 613
A +L DR L +DPA GG +L+QHLF FFGHPEVY+L LP FGI+
Sbjct: 225 FPLLLAAALGVLYDRKLGGHLYDPANGGS-LLWQHLFWFFGHPEVYVLALPFFGIV 279
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 98.3 bits (234), Expect = 1e-19
Identities = 58/201 (28%), Positives = 87/201 (43%)
Frame = +2
Query: 11 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXX 190
YN + T H N L+P+++GA D+AFP++N + F
Sbjct: 77 YNRMFTLHGVVMIFLFMIPAIPSGFGNFLLPIMIGAKDVAFPKLNLLSFYVYLAGAVVAL 136
Query: 191 XXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXX 370
+V+ GA TG T Y P S+ + V L F L G SS
Sbjct: 137 FG-MVQGGADTGWTFYTPYSTTTITKVVPVLLGAFIL---GFSSILTGLNFIVTTHTMRA 192
Query: 371 XXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 550
+ +LPLFV ++ T+ ++ ++ + FDPA GGDP+L+QH
Sbjct: 193 PGMGWTRLPLFVWSIYATSVIQILATPVLGMSLLLVAVEHAFGWGIFDPARGGDPVLFQH 252
Query: 551 LF*FFGHPEVYILILPGFGII 613
F F+ HP VYI++LP +I
Sbjct: 253 FFWFYSHPAVYIMVLPAMAVI 273
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 98.3 bits (234), Expect = 1e-19
Identities = 59/175 (33%), Positives = 84/175 (48%), Gaps = 2/175 (1%)
Frame = +2
Query: 89 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGA-GTG*TVYPPLSSNIAH 265
N +VPL +GA D+AFPR+N + + E+GA G T+Y PL++ I
Sbjct: 88 NYIVPLQIGARDLAFPRLNALSYWLYLLSGLVLLASFFTESGAPNVGWTLYAPLTARIYT 147
Query: 266 RGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXX 445
G +DLA ++ L +S + ++P+F ++ T
Sbjct: 148 PGIGLDLAALAIFLFSLSVTLGTINFLVTIAAMRAPGIGWFKMPMFTWSILFTVILMLWA 207
Query: 446 XXXXAGAITILLTDRNLNTSFF-DPAGGGDPILYQHLF*FFGHPEVYILILPGFG 607
+LL DRNL T FF +PAGG +L+ HLF FFGHPEVYIL+ P G
Sbjct: 208 FPPLMVGGALLLLDRNLGTEFFLNPAGGA--LLWDHLFWFFGHPEVYILLFPALG 260
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 97.5 bits (232), Expect = 2e-19
Identities = 65/218 (29%), Positives = 95/218 (43%), Gaps = 15/218 (6%)
Frame = +2
Query: 5 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 184
+ Y +VT HA N L+PL++GA D+AFP +N + +
Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTLNMLSYWFMWPAFFF 145
Query: 185 XXXXXIVE-NGAGTG*TVYPPLS---SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXX 352
+ +GA G T YPPLS ++ G + L + + G+SS
Sbjct: 146 FGGAFFCDGHGAAAGWTSYPPLSDMTTSAPSSGAAQTLWLLGVTTVGVSSMLGSVNYMTT 205
Query: 353 XXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP----- 517
+ +LPL + A+ ITA A ++L DR + T FF P
Sbjct: 206 IIQMRAPGMTMFRLPLTIWAMFITALLQAFALPVLTAAGFMMLADRLIGTGFFLPEGLVV 265
Query: 518 ------AGGGDPILYQHLF*FFGHPEVYILILPGFGII 613
AGGG P+L+QHLF F+ HP VYI+ILP G++
Sbjct: 266 NNSPMAAGGGQPLLWQHLFWFYSHPAVYIMILPAMGMV 303
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 97.1 bits (231), Expect = 3e-19
Identities = 58/202 (28%), Positives = 86/202 (42%), Gaps = 1/202 (0%)
Frame = +2
Query: 11 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXX 190
YN I+T H N +VPL+LGA D+A PR+N +
Sbjct: 66 YNQILTLHGATMLFFFIIQAGLTGFGNFVVPLMLGARDVALPRVNAFSYWAFLGAIVLAL 125
Query: 191 XXXIVENGA-GTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXX 367
GA G T Y P S A VD + ++ L G SS
Sbjct: 126 MSYFFPGGAPSVGWTFYYPFS---AQSESGVDFYLAAILLLGFSSLLGNANFVATIYNLR 182
Query: 368 XXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQ 547
S ++P++V +V + A ++L +R + S+F+PA GGDP+L+Q
Sbjct: 183 AQGMSLWKMPIYVWSVFAASVLNLFSLAGLTAATLLVLLERKIGLSWFNPAVGGDPVLFQ 242
Query: 548 HLF*FFGHPEVYILILPGFGII 613
F F+ HP VY+++LP GI+
Sbjct: 243 QFFWFYSHPTVYVMLLPYLGIL 264
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 95.9 bits (228), Expect = 7e-19
Identities = 55/202 (27%), Positives = 88/202 (43%)
Frame = +2
Query: 5 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 184
Q YN ++T H N +VPL +GA D++FP +N + F
Sbjct: 64 QAYNEVMTMHGTTMIFLAAMPLLFALM-NAVVPLQIGARDVSFPFLNALGFWLFFFGHIF 122
Query: 185 XXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXX 364
+ G T Y LS + +G +D + L ++G+ +
Sbjct: 123 LNLSWFLGGAPDAGWTSYASLS--LHSKGHGIDFFVLGLQISGLGTLIAGINFLATIINM 180
Query: 365 XXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY 544
++ +LPLF + + + +++ DR T+FF+P GG+ +++
Sbjct: 181 RAPGMTYMRLPLFTWTTFVASALILFAFPPLTVGLALMMLDRLFGTNFFNPELGGNTVIW 240
Query: 545 QHLF*FFGHPEVYILILPGFGI 610
+HLF FGHPEVYILILP FGI
Sbjct: 241 EHLFWIFGHPEVYILILPAFGI 262
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 93.9 bits (223), Expect = 3e-18
Identities = 59/200 (29%), Positives = 82/200 (41%)
Frame = +2
Query: 11 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXX 190
YN I T H N +VPL +GA D+AFP +NN+ F
Sbjct: 95 YNEIFTTHGTIMIIFMAMPFLIGLI-NVVVPLQIGARDVAFPYLNNLSFWTFFVGAMLFN 153
Query: 191 XXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXX 370
++ G T Y PL+SN G + + L +AGI +
Sbjct: 154 ISFVIGGSPNAGWTSYMPLASNDMSPGPGENYYLLGLQIAGIGTLMTGINFMVTILKMRT 213
Query: 371 XXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 550
+ ++P+F IT A+ +L DR FF GG P+L+ +
Sbjct: 214 KGMTLMRMPMFTWTTLITMVIIVFAFPVLTVALALLSFDRLFGAHFFTLEAGGMPMLWAN 273
Query: 551 LF*FFGHPEVYILILPGFGI 610
LF +GHPEVYI+ILP FGI
Sbjct: 274 LFWIWGHPEVYIVILPAFGI 293
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 91.5 bits (217), Expect = 1e-17
Identities = 52/173 (30%), Positives = 78/173 (45%)
Frame = +2
Query: 95 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 274
L+PL++GA D+ FPR+ + + + G +Y PLS++ G
Sbjct: 124 LIPLMIGARDLVFPRLGAFGYYCYLFGGIIVLSSFLFDAAPDGGWFMYVPLSTSAYTEGL 183
Query: 275 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 454
S D + + LA I+S S ++P+ + + TAF
Sbjct: 184 SADFWLIGITLAEIASVTAAVEIIAAILCSRAPGMSLTKMPILMWYLLATAFMIAIAFPP 243
Query: 455 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGII 613
+L +R L FFD GGDP+L+QHLF FGHPEVYI+ LP G++
Sbjct: 244 LIIGSILLEAERLLGLPFFDHTLGGDPLLWQHLFWLFGHPEVYIIFLPAAGMV 296
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 90.6 bits (215), Expect = 3e-17
Identities = 60/200 (30%), Positives = 84/200 (42%)
Frame = +2
Query: 11 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXX 190
Y+ I TAH N +VPL +GA D+AFP +N++ F
Sbjct: 100 YDQIFTAHGVIMIIFMAMPFMTGLM-NIVVPLQIGARDVAFPFLNSLSFWLLVSAVILVN 158
Query: 191 XXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXX 370
V N A TG YPPL+ VD I++L ++GI +
Sbjct: 159 LSLGVGNFARTGWVAYPPLAELGFSPDVGVDYYIWALQISGIGTTLTAINFLVTVIKMRA 218
Query: 371 XXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 550
+P+F GA+ +L DR L+ FF GG+ ++Y +
Sbjct: 219 PGMKLMDMPIFTWTCTWANVLIATSFPILTGALAMLALDRYLDFHFFTAELGGNAMMYLN 278
Query: 551 LF*FFGHPEVYILILPGFGI 610
LF +GHPEVYIL+LP FGI
Sbjct: 279 LFWAWGHPEVYILVLPAFGI 298
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 89.4 bits (212), Expect = 6e-17
Identities = 66/215 (30%), Positives = 89/215 (41%), Gaps = 14/215 (6%)
Frame = +2
Query: 11 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXX 190
Y +T H N L+PL++GA D+ FP +N + +
Sbjct: 81 YLQFITMHGMIMVIYLLTALFLGGFGNYLIPLMVGARDMVFPYVNMLSYWVYLLAVLVLA 140
Query: 191 XXXIVENG-AGTG*TVYPP--LSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXX 361
V G G G T+YPP + S + + L + SL L I
Sbjct: 141 SAFFVPGGPTGAGWTLYPPQAILSGTPGQDWGIVLMLSSLILFIIGFTMGGLNYVVTVLQ 200
Query: 362 XXXXXXSFDQLPLFV*AV-GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA------ 520
+ +LPL V + T G++ +LL DR L TSFF P
Sbjct: 201 ARTRGMTLMRLPLTVWGIFTATVMALLAFPALFVGSVMLLL-DRLLGTSFFMPTLVEMGQ 259
Query: 521 ----GGGDPILYQHLF*FFGHPEVYILILPGFGII 613
GGG P+L+QHLF FFGHPEVYI+ LP FGI+
Sbjct: 260 LSKYGGGSPLLFQHLFWFFGHPEVYIVALPAFGIV 294
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 88.6 bits (210), Expect = 1e-16
Identities = 65/216 (30%), Positives = 93/216 (43%), Gaps = 14/216 (6%)
Frame = +2
Query: 5 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 184
+ Y +VT H N L+PL +GA D+A +N + +
Sbjct: 100 EFYLALVTMHGTIMVFFVLTAGLSGTFSNFLIPLQIGARDMASGFMNMLSYWFFFGSSVI 159
Query: 185 XXXXXIVENGAGTG*-TVYPPLSS---NIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXX 352
+E G +G +YPPLS+ ++ G + + + S+ L IS
Sbjct: 160 MFASIFLETGPASGSWVIYPPLSALPQAMSGSGAGMTMWLISMALFIISVLLGGINYITT 219
Query: 353 XXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP----A 520
SF +LPL + A ITA A +L+ DR+L TSFF A
Sbjct: 220 VINLRVKGMSFTRLPLTIWAFFITAIIGLLSFPVLFSAALLLIFDRSLGTSFFLSEIYIA 279
Query: 521 G------GGDPILYQHLF*FFGHPEVYILILPGFGI 610
G GG P+L+QHLF F GHPEVYI+++P GI
Sbjct: 280 GEALHHQGGSPVLFQHLFWFLGHPEVYIVLIPALGI 315
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 88.6 bits (210), Expect = 1e-16
Identities = 54/175 (30%), Positives = 77/175 (44%)
Frame = +2
Query: 89 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 268
N L PL+LG+ D+AFPR+ + + G Y PL+S
Sbjct: 116 NYLWPLMLGSRDMAFPRLTAFSYWSFLFAGLFLYASFPLGAVPDGGWFNYVPLTSLDYSA 175
Query: 269 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 448
G ++D+ + L GIS+ S D+LP+ V +
Sbjct: 176 GANIDIYGLGMILLGISTTGGAANFVVTLLRMRAHGMSIDRLPIIVWGTLTASVSNLVAV 235
Query: 449 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGII 613
+ A +L DRN T FFD A GG P+L+QHLF F HP VY+++LP GI+
Sbjct: 236 PSVSLAFLLLWLDRNAGTHFFDVAHGGRPLLWQHLFWMFAHPWVYVVVLPAMGIV 290
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 88.6 bits (210), Expect = 1e-16
Identities = 59/200 (29%), Positives = 82/200 (41%)
Frame = +2
Query: 11 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXX 190
Y+ I TAH N VPL +GA D+AFP +N++ F
Sbjct: 99 YDQIFTAHGVIMIIFMAMPFFTGLM-NLAVPLQIGARDVAFPFLNSLSFYLLLAGVLLVN 157
Query: 191 XXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXX 370
V A TG YPPL+ G VD I++L L+G+ +
Sbjct: 158 ISLGVGEFAKTGWVAYPPLAGIQYSPGVGVDYYIWALQLSGLGTTLTGVNFLVTVMKMRA 217
Query: 371 XXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 550
+P+F A+ +L DR L+ F GG+P++Y +
Sbjct: 218 PGMKLMDMPIFTWTCTWANVLIVASFPILTAALALLTVDRYLDFHIFTNELGGNPMMYVN 277
Query: 551 LF*FFGHPEVYILILPGFGI 610
LF +GHPEVYILILP FG+
Sbjct: 278 LFWAWGHPEVYILILPAFGV 297
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 88.2 bits (209), Expect = 1e-16
Identities = 52/173 (30%), Positives = 76/173 (43%)
Frame = +2
Query: 95 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 274
++PL+LG D+ FPR+N + ++ G YPPL+ G
Sbjct: 105 IIPLMLGTRDMTFPRLNAFGYYIYLIAGVMMYAALLLRIAPDAGWFSYPPLAGASFSPGL 164
Query: 275 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 454
+D + IS+ S +++P+FV AV + +F
Sbjct: 165 GLDFYTTVVTFMEISALVAAIELIATIFKCKVPGMSLNRMPIFVWAVLVMSFMIVFALPP 224
Query: 455 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGII 613
A +L DR FF A GDPIL+QHLF FFGHPEVYI+ +P G++
Sbjct: 225 LVIASLMLALDRMAGMHFFT-AASGDPILWQHLFWFFGHPEVYIIFIPALGMV 276
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 87.4 bits (207), Expect = 2e-16
Identities = 57/203 (28%), Positives = 86/203 (42%), Gaps = 1/203 (0%)
Frame = +2
Query: 8 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXX 187
+YNT + H N +PL++GA D+AFPR+N +
Sbjct: 56 VYNTWLYFHGAAMILAFQIPALTGFFANYFIPLMIGAKDVAFPRVNALSVWLFYAGVLVA 115
Query: 188 XXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXX 367
+ + T YPP S I H + FS+ L G +S
Sbjct: 116 LTTFFIPDPPDIMWTGYPPYSI-ITHGNTA--FYTFSVLLLGFASILGGVNFLTTVTFMR 172
Query: 368 XXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG-AITILLTDRNLNTSFFDPAGGGDPILY 544
+++L +FV A + AF G A+T+L D+ + T FFD A GGD + Y
Sbjct: 173 APGIGWNKLNIFVWAT-LAAFVLQLIFVPVLGTAVTMLTFDKYIGTHFFDAAAGGDALTY 231
Query: 545 QHLF*FFGHPEVYILILPGFGII 613
Q+LF F+ HP VY++ LP ++
Sbjct: 232 QNLFWFYSHPAVYVIFLPFMAMV 254
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 85.8 bits (203), Expect = 7e-16
Identities = 56/176 (31%), Positives = 79/176 (44%), Gaps = 1/176 (0%)
Frame = +2
Query: 89 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS-SNIAH 265
N LVP ++GA D+ +P+IN + F ++ G +Y PLS +
Sbjct: 80 NYLVPRMIGAHDLYWPKINALSFWMLVPAVILAAISPLL-GAVDLGWYMYAPLSVETTVN 138
Query: 266 RGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXX 445
G +L +L L+G+SS + ++PLFV TA
Sbjct: 139 YGLGTNLIQIALILSGLSSTLTGVNFVMTITKMKKV--PYLKMPLFVWGFFTTAILMIIA 196
Query: 446 XXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGII 613
+ +R T FFD A GG P+L+Q LF FFGHPEVYILILP G++
Sbjct: 197 MPSLTAGLVFAYLERLWGTPFFDSALGGSPVLWQQLFWFFGHPEVYILILPAMGLV 252
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 85.4 bits (202), Expect = 1e-15
Identities = 51/173 (29%), Positives = 74/173 (42%)
Frame = +2
Query: 95 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 274
L+P +LG+ D+AFPR+ F + +G +YPPLSS + G
Sbjct: 98 LLPKLLGSRDLAFPRLTAYGFWCYVFGGSMMIFSLLWGIAPDSGWFMYPPLSSTLGAPGI 157
Query: 275 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 454
+ D + + IS+ S ++P+F +TA
Sbjct: 158 NSDFWLIGITFVEISAIAAAVEITVTVLRYRAPGMSLSKMPIFAWYALVTAVMILTGFPP 217
Query: 455 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGII 613
+L +R + FF A GGD +L+QHLF FGHPEVYI+ LP G I
Sbjct: 218 LILGSILLELERAFDMPFFQAAAGGDALLWQHLFWLFGHPEVYIIFLPAAGAI 270
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 83.8 bits (198), Expect = 3e-15
Identities = 57/156 (36%), Positives = 68/156 (43%)
Frame = +2
Query: 95 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 274
L PL +GAP +A PR+ N+ F + G G VYPP SS +AH
Sbjct: 72 LXPLXVGAPXMAXPRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAHSSG 131
Query: 275 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 454
+VDL IF LHLAGISS ++ LF
Sbjct: 132 AVDLGIFXLHLAGISSXLGSMNFLVTLGNMKXKGLNYGNFSLFCWXXVXXXXXLILSXPV 191
Query: 455 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 562
A AIT+L R N SFF P G P + F F
Sbjct: 192 LAAAITMLXXXRXXNXSFFXPXXXGXPXXFPTFFXF 227
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 83.0 bits (196), Expect = 5e-15
Identities = 54/174 (31%), Positives = 74/174 (42%)
Frame = +2
Query: 89 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 268
N +VPL +GA D+AFP +N+I +V + G YPP + + +
Sbjct: 144 NYVVPLQIGARDVAFPILNSISLWLTAAGAALVMISLVVGAFSTGGWFGYPPYTETLYNP 203
Query: 269 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 448
G VD I+SL LA + S +PLF TA
Sbjct: 204 GIGVDYWIWSLTLASLGSTLTGINIAVTIYKKRAPGMKLYYMPLFTWTALCTAIMMIFAM 263
Query: 449 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGI 610
L DR L+ FF GG+ + + ++F FGHPEVYILILP FG+
Sbjct: 264 PPLTVVTLQLALDRYLDFHFFTNGLGGNQMNFLNMFWLFGHPEVYILILPAFGV 317
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 82.6 bits (195), Expect = 7e-15
Identities = 58/205 (28%), Positives = 82/205 (40%), Gaps = 4/205 (1%)
Frame = +2
Query: 11 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXX 190
+N + T HA N +PL++GA D+AFPR+N +
Sbjct: 71 FNALFTMHATTMIFLGVMPLLSAFM-NYFLPLMIGARDVAFPRLNAFSYWIYLFGALFIN 129
Query: 191 XXXIVENGAG----TG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXX 358
++ G G Y L+S G D L L GI +
Sbjct: 130 AGWLMGTAGGHVPDIGWFGYANLTSVQFTSGLGPDFWTLGLLLLGIGTLVSGFNFIVTIL 189
Query: 359 XXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPI 538
+ ++P+FV +T+ A+ +L+ DR +FF+ GG +
Sbjct: 190 NMRAPGMTLMKMPVFVWTTLVTSAIIIFAFPSVTVALIMLMFDRTFAANFFEVLRGGSVV 249
Query: 539 LYQHLF*FFGHPEVYILILPGFGII 613
YQHLF FGHPEVYILILP GII
Sbjct: 250 FYQHLFWTFGHPEVYILILPAMGII 274
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 82.6 bits (195), Expect = 7e-15
Identities = 56/175 (32%), Positives = 81/175 (46%)
Frame = +2
Query: 89 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 268
N VP+++ D+A+P++N I F + T PP S I+
Sbjct: 88 NYFVPIMVRYKDMAYPKLNAIAFWMIPPAGALVWLGFADFSWYAT-----PPYSV-ISAP 141
Query: 269 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 448
G + D+ IF L + GISS S Q+PL + ++
Sbjct: 142 GPAADMWIFGLKILGISSILGSINFIVTILKCKHPDMSLGQVPLLAWSYLSSSLIVLVAL 201
Query: 449 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGII 613
A A+ +LLTDR + FF+PA GGDPI Y HLF F HPEVY+L++P G++
Sbjct: 202 PTFAAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLFWFTFHPEVYVLVIPAIGMM 256
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 82.2 bits (194), Expect = 9e-15
Identities = 49/173 (28%), Positives = 75/173 (43%)
Frame = +2
Query: 95 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 274
L+P +LG+ D+A+PR++ F + +G +YPPL+S + G
Sbjct: 98 LLPKMLGSRDLAYPRLSAYGFWCYVLGGSMLIVALLAGIAPDSGWFMYPPLASTLGSPGI 157
Query: 275 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 454
+ D + + IS+ S D++P++ +TA
Sbjct: 158 NSDFWLLGITFVEISAIAAAVEIVVTVLRFRAPGMSLDRMPIYGWYALVTATMILTGFPP 217
Query: 455 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGII 613
+L +R FF A GGD +L+QHLF FGHPEVYI+ LP G I
Sbjct: 218 LILGSILLELERAFGLPFFQVAEGGDSLLWQHLFWLFGHPEVYIIFLPAAGAI 270
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 82.2 bits (194), Expect = 9e-15
Identities = 49/133 (36%), Positives = 66/133 (49%), Gaps = 3/133 (2%)
Frame = +2
Query: 224 G*TVYPPLSSNIAHRG-RSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ--L 394
G T P SSNI + G S D+ I S+ AGIS+ + +
Sbjct: 283 GWTFITPFSSNIKYTGVGSQDILILSVVFAGISTTISFTNLLITRRTLAMPGMRHRRVLM 342
Query: 395 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 574
P ++ +T A+ ++ DR+ T+FF+ A GGDPIL QHLF FFGHP
Sbjct: 343 PFVTISIFLTLRMLATITPVLGAAVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGHP 402
Query: 575 EVYILILPGFGII 613
EVY+LI+P FG I
Sbjct: 403 EVYVLIIPTFGFI 415
Score = 33.9 bits (74), Expect = 3.1
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 11 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 157
Y +VTAH N L+P +G+ D+A+PR+N+I F
Sbjct: 104 YLQVVTAHGLIMVFFVVVPILFGGFANFLIPYHVGSKDVAYPRLNSIGF 152
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 81.8 bits (193), Expect = 1e-14
Identities = 62/221 (28%), Positives = 90/221 (40%), Gaps = 16/221 (7%)
Frame = +2
Query: 5 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 184
+ Y +++T H N +P+ +GA D+AFPR N + F
Sbjct: 84 EYYLSLLTMHGTLMVFFVLTNAPFAAFGNYFLPIQIGAEDMAFPRFNMMSFWTTFAAFCV 143
Query: 185 XXXXXIVENGAG-TG*TVYPPLSS--NIAHRGRSVDLAIFSLHLA--GISSXXXXXXXXX 349
+ +G +G T Y LS+ A G + ++ + +A I+S
Sbjct: 144 LIAAFFIPDGPPISGWTAYATLSAVGGDAGPGMAYGQTLWGISIAIFCIASLLGSLNFIA 203
Query: 350 XXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAG-- 523
S ++P+ A IT+ A +L DR TSFF P+G
Sbjct: 204 TTLDLRTKGMSLMRMPICTWAWFITSCIALLAFAVLLPACILLCLDRVAGTSFFIPSGLV 263
Query: 524 ---------GGDPILYQHLF*FFGHPEVYILILPGFGIIXH 619
GG +L+QHLF FFGHPEVYI ILP GI+ H
Sbjct: 264 FNDHVIPHGGGSALLWQHLFWFFGHPEVYIAILPAMGIVSH 304
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 81.8 bits (193), Expect = 1e-14
Identities = 35/43 (81%), Positives = 38/43 (88%)
Frame = +2
Query: 491 NLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIXH 619
N T+FFDPAGGGD IL+QHLF FFGHPEVYILILPGFG+I H
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFGMISH 233
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 81.4 bits (192), Expect = 2e-14
Identities = 54/201 (26%), Positives = 78/201 (38%)
Frame = +2
Query: 11 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXX 190
YN I T H L+P +L A D+ FPR++
Sbjct: 81 YNQIFTVHGTTMMFLFAVPVVEALGVM-LLPQMLAARDLPFPRLSAFAIWAYIVGGLVFF 139
Query: 191 XXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXX 370
+ G +YPPL+ G + D + + IS+
Sbjct: 140 STVFYDLAPKGGWFMYPPLTLKEYSPGDNADFWLLGIGFIEISAIAGAIEIIVGTLRTRP 199
Query: 371 XXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 550
S ++P+F A+ I A A +L +R+ FF GGDP+L+QH
Sbjct: 200 PGMSLTRMPIFAWAMLIFAAMIMIAFPAVILATMLLEIERSFGWPFFTAERGGDPLLWQH 259
Query: 551 LF*FFGHPEVYILILPGFGII 613
LF FFGHPEVYI+ LP G++
Sbjct: 260 LFWFFGHPEVYIIFLPAAGLV 280
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 81.0 bits (191), Expect = 2e-14
Identities = 39/65 (60%), Positives = 45/65 (69%)
Frame = +2
Query: 104 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 283
L+LGAPD+AFPR+NN+ F +VENGAGTG TVYPPLSS AH G SVD
Sbjct: 1 LMLGAPDMAFPRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVD 60
Query: 284 LAIFS 298
LAI+S
Sbjct: 61 LAIYS 65
Score = 60.5 bits (140), Expect = 3e-08
Identities = 29/56 (51%), Positives = 32/56 (57%)
Frame = +1
Query: 403 CMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWT 570
CM C +Y TCFS S+Y IIN K KY IF W P +STFILIFWT
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFWT 152
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 80.6 bits (190), Expect = 3e-14
Identities = 49/173 (28%), Positives = 75/173 (43%)
Frame = +2
Query: 95 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 274
L+P +LGA D+ FPR++ F V G + PPL++ G
Sbjct: 167 LLPNMLGARDLPFPRLSAYAFWAYLVGGLVFFASIFVGWAPDGGWFMNPPLTTETYSPGY 226
Query: 275 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 454
+ D + + IS+ + ++P+F A+ + A
Sbjct: 227 NADFWLLGIGFIEISAIAGAIEIIVGILRTRSPGMTLGRMPVFAWAMLVFALMIVFAFPA 286
Query: 455 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGII 613
A +L +R + FF GGDP+L+QHLF FFGHPEVYI+ LP G++
Sbjct: 287 VILATALLELERAFHWPFFAAHLGGDPLLWQHLFWFFGHPEVYIIFLPAAGMV 339
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 80.6 bits (190), Expect = 3e-14
Identities = 50/174 (28%), Positives = 76/174 (43%)
Frame = +2
Query: 89 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 268
N ++PL +G+ D+AFP +N + F I+ A TG YPPLS
Sbjct: 119 NIIIPLQIGSKDVAFPSLNLLSFWLTFFSVLLINISLIIGEFAKTGWLGYPPLSEKTFSP 178
Query: 269 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 448
VD +S+ ++GI + F+++ +F+ +
Sbjct: 179 WVGVDYWNWSIQISGIGTIISSINFITTILKLRKKKLFFNKISIFMWTCLCSNILILISF 238
Query: 449 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGI 610
+ + DR L+T F+ GG +LY +L +GHPEVYILILP FGI
Sbjct: 239 PILTILLFQIFLDRTLSTHFYSSFYGGQQMLYINLIWAWGHPEVYILILPSFGI 292
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 77.4 bits (182), Expect = 3e-13
Identities = 55/217 (25%), Positives = 84/217 (38%), Gaps = 14/217 (6%)
Frame = +2
Query: 5 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 184
+ Y + T HA N L+PL++GA D+AFP++N + +
Sbjct: 90 EFYTMLFTMHATVMIFLVIIPILAGMFGNFLIPLMIGADDMAFPKLNMLSYWFMWPAIAC 149
Query: 185 XXXXXIVENGAGTG*TVYP---PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXX 355
G G T YP L+ G + + + G SS
Sbjct: 150 FGMSFKYAGGPAAGWTSYPVLADLAQAAPGSGTAQTYWLLGVTFVGFSSMMGSINYMTTI 209
Query: 356 XXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAG---- 523
+F +LP+ + + ITA + + DR T FF P+G
Sbjct: 210 INMRAPGMTFFRLPMTIWGLFITAILQAFALPVLTAGGFMQVADRLFGTCFFYPSGLVIN 269
Query: 524 -------GGDPILYQHLF*FFGHPEVYILILPGFGII 613
GG P+L+QHLF F+ HP VYI++LP G++
Sbjct: 270 NAAPTVGGGQPLLWQHLFWFYSHPAVYIMLLPIMGMV 306
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 75.4 bits (177), Expect = 1e-12
Identities = 50/200 (25%), Positives = 74/200 (37%)
Frame = +2
Query: 11 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXX 190
YN ++T HA N +PL LG D+A PR+N
Sbjct: 74 YNQVLTMHAAIMLFFFLIPLGLFGFGNYFLPLQLGVRDVALPRLNTFAVWLFIASLILVV 133
Query: 191 XXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXX 370
G T Y PL+ + G SV + L+ G+ S
Sbjct: 134 LGLFNGGAPSVGWTFYYPLTMDGNQTGVSVFMVAVILN--GLGSLLGSANFAATIVNLRA 191
Query: 371 XXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 550
++P+F ++ T+ A + + L S F+P GG P+LYQ
Sbjct: 192 PGMGLWKMPVFAWSIFATSILQLLTLGGLTAAALLTYLEIKLGLSMFNPGIGGVPVLYQQ 251
Query: 551 LF*FFGHPEVYILILPGFGI 610
F F+ HP VY+++LP GI
Sbjct: 252 FFWFYSHPAVYVMLLPYLGI 271
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 75.4 bits (177), Expect = 1e-12
Identities = 51/172 (29%), Positives = 76/172 (44%), Gaps = 1/172 (0%)
Frame = +2
Query: 95 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLSSNIAHRG 271
L+PL +G+ D+ +PR+N + + + G TG TVY PLSS
Sbjct: 111 LIPLAIGSRDMIYPRMNALGYWLFLFSGIMLWSGFFLPGGNLDTGWTVYEPLSSFKFTPY 170
Query: 272 RSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXX 451
D A ++ L GI + LPLFV AV A
Sbjct: 171 LGADTAAAAVVLRGIGTIIASTEILATIFKARAKGYRMMNLPLFVWAVFWVAAISWFVFP 230
Query: 452 XXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFG 607
G +LL ++ S++ GG +++++LF +FGHPEVY+L+LPG G
Sbjct: 231 EITGLFFLLLVGNLMHASYYISNYGG-ALMWENLFWYFGHPEVYLLLLPGTG 281
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 74.9 bits (176), Expect = 1e-12
Identities = 45/168 (26%), Positives = 71/168 (42%)
Frame = +2
Query: 95 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 274
L+P +LGA D+ FPR++ + + + +G +YPPL++ G
Sbjct: 126 LLPALLGARDLPFPRLSAYGYWCFLIGGVFVMGSILFDAAPKSGWFMYPPLATQ--DEGL 183
Query: 275 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 454
D+ + L ++S + +PL+ V +
Sbjct: 184 GSDIWLLGLSFIEVASIAAAVELIVGVLKCRPPGMRVNLMPLYAWYVLVVGGMILFAFPP 243
Query: 455 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 598
+ +R + FFDP GGDP+L+QHLF FGHPEVYI+ LP
Sbjct: 244 LIAGDLLFEMERGFDWPFFDPERGGDPLLWQHLFWIFGHPEVYIIFLP 291
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 72.5 bits (170), Expect = 7e-12
Identities = 47/175 (26%), Positives = 73/175 (41%)
Frame = +2
Query: 89 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 268
N +VPL +GA D+AFP +N + V + + G PL+
Sbjct: 143 NIIVPLQIGARDMAFPYLNAVGLWLTAVAAALVMLSLFVGDFSHDGWIGLIPLTELPYSP 202
Query: 269 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 448
G VD ++++ + + + ++ +LP V T
Sbjct: 203 GVGVDYWMWAIQIGSVGTTLNAINMIATIVKLRAPGMTWSRLPFVVWTSLTTNIIALTAF 262
Query: 449 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGII 613
A+ +L DR L T FF GG+ +LY +LF +GHPEVY ++LP FG I
Sbjct: 263 PILGVALAMLGADRYLGTHFFTAGLGGNLMLYTNLFWIWGHPEVYFVVLPAFGFI 317
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 72.5 bits (170), Expect = 7e-12
Identities = 39/83 (46%), Positives = 48/83 (57%)
Frame = +2
Query: 242 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 421
PL+S+IAH G SVD+AIFSLHLAG+SS + D++PLF+ AV I
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFI 131
Query: 422 TAFXXXXXXXXXAGAITILLTDR 490
T AGAIT+LLTDR
Sbjct: 132 TTVLLLLSLPVLAGAITMLLTDR 154
Score = 35.5 bits (78), Expect = 1.0
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = +1
Query: 76 WRIWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFKKN 201
W IWKL P NK YKILT PL Y K+N
Sbjct: 28 WWIWKLINSANVSGPWYGFPANKQYKILTSAPLTYTPINKRN 69
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 68.5 bits (160), Expect = 1e-10
Identities = 39/82 (47%), Positives = 45/82 (54%)
Frame = +2
Query: 5 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 184
Q N IVTAHA N LVPL++GAPD+AFPR+NN+ F
Sbjct: 53 QXXNVIVTAHAFVMIFXMXMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLL 112
Query: 185 XXXXXIVENGAGTG*TVYPPLS 250
VE GAGTG TVYPPL+
Sbjct: 113 LLASSTVEAGAGTGWTVYPPLA 134
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 68.5 bits (160), Expect = 1e-10
Identities = 48/188 (25%), Positives = 75/188 (39%), Gaps = 13/188 (6%)
Frame = +2
Query: 89 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSN--IA 262
N LVPL +GA D+AFPR+N + + G T+Y PL++ I
Sbjct: 89 NYLVPLQIGADDLAFPRLNALSYWLYLFSGILMGVSFFQGTTFAGGWTMYAPLNTPAYIP 148
Query: 263 HRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 442
G + +L + + +P+F ++ +T +
Sbjct: 149 GEGLGATSVVLALIMFTAAVTLGSVNFLTTMYRMRAEGLRMRDIPIFSLSINLTVWMMLF 208
Query: 443 XXXXXAGAITILLTDRNLNTSFF-----------DPAGGGDPILYQHLF*FFGHPEVYIL 589
A+ IL +D L T++F D G +L+ HLF FFGHPEVYI+
Sbjct: 209 AFAALLAALMILASDHILGTTYFQYSIDGTTMATDADNPGASLLWAHLFWFFGHPEVYIV 268
Query: 590 ILPGFGII 613
P G++
Sbjct: 269 FFPALGVM 276
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 68.1 bits (159), Expect = 2e-10
Identities = 31/44 (70%), Positives = 32/44 (72%)
Frame = +1
Query: 490 KLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNXSY 621
K KYIIF S W F+STFILIFWT SLYFNFT IWYN SY
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSY 50
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 67.7 bits (158), Expect = 2e-10
Identities = 42/106 (39%), Positives = 51/106 (48%)
Frame = +2
Query: 5 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 184
Q+YN +VTAH N LVPL+LGAPD+AFPR+NN+ F
Sbjct: 36 QLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNNMSFGFFPLHWHY 95
Query: 185 XXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 322
+ G + PL G SVDLAIF LHLAG+SS
Sbjct: 96 YSFFTV--KGGLARDELSTPLYLVTISAGPSVDLAIFPLHLAGVSS 139
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 65.3 bits (152), Expect = 1e-09
Identities = 36/85 (42%), Positives = 43/85 (50%)
Frame = +2
Query: 5 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 184
Q+YN I+TAHA N LVP+++GAPD+AFPR+NNI F
Sbjct: 52 QLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLIL 111
Query: 185 XXXXXIVENGAGTG*TVYPPLSSNI 259
VE GAGTG TV LS I
Sbjct: 112 LLASAFVEQGAGTGWTVKCKLSQII 136
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 59.3 bits (137), Expect = 7e-08
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +2
Query: 200 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 322
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 58.8 bits (136), Expect = 1e-07
Identities = 31/70 (44%), Positives = 40/70 (57%)
Frame = +2
Query: 386 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FF 565
DQ+ LF ++ IT AG IT+LL+DRN N FF GG PIL+Q++ F
Sbjct: 12 DQINLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLF 71
Query: 566 GHPEVYILIL 595
GH +V LIL
Sbjct: 72 GHTDVLFLIL 81
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 57.6 bits (133), Expect = 2e-07
Identities = 28/77 (36%), Positives = 39/77 (50%)
Frame = +2
Query: 5 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 184
Q+YN ++TAHA N VP+++G+PD+AFPR+NNI F
Sbjct: 56 QLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPILIGSPDMAFPRLNNISFWLLPPSLLL 115
Query: 185 XXXXXIVENGAGTG*TV 235
+VE G G+G TV
Sbjct: 116 LLSSALVEVGCGSGWTV 132
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 56.4 bits (130), Expect = 5e-07
Identities = 32/85 (37%), Positives = 41/85 (48%)
Frame = +2
Query: 5 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 184
Q +N ++TAHA N L+PL+LGA D+AF R+NNI F
Sbjct: 58 QAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFARLNNISFWLLVPSLIL 117
Query: 185 XXXXXIVENGAGTG*TVYPPLSSNI 259
+VE GAGTG TV SS +
Sbjct: 118 ILTSALVEAGAGTGWTVKKICSSKM 142
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 51.6 bits (118), Expect = 1e-05
Identities = 27/77 (35%), Positives = 38/77 (49%)
Frame = +2
Query: 5 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 184
Q++N +V HA N L+PL++GA D++F R+NNI F
Sbjct: 53 QLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGASDMSFARLNNISFWLLPPALVC 112
Query: 185 XXXXXIVENGAGTG*TV 235
+VE+GAGTG TV
Sbjct: 113 LVTSTLVESGAGTGWTV 129
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 48.8 bits (111), Expect = 1e-04
Identities = 40/172 (23%), Positives = 63/172 (36%)
Frame = +2
Query: 95 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 274
L+PL+LG ++ FP++ + + G TG YPPL+ N G
Sbjct: 180 LIPLMLGTRNVVFPKLLGLSWWLLPPATFAVFMSPTT-GGFQTGWWGYPPLAQN---SGS 235
Query: 275 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 454
+ + ++S S ++P+FV + A
Sbjct: 236 GIVWYVLGAATILVASLLGAINIAGTMVYMRAKGMSLGRVPIFVWGLFAAATTLVVESPA 295
Query: 455 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGI 610
+ L+D + F+ G P+ Y F F HPEVY+ ILP F I
Sbjct: 296 TYTGALMDLSDMIAGSHFYT-GPTGHPLAYLDQFWFLFHPEVYVFILPAFAI 346
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 48.4 bits (110), Expect = 1e-04
Identities = 25/51 (49%), Positives = 29/51 (56%)
Frame = +1
Query: 406 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFIL 558
M C +YS +TC WSYYN IN SKLKYI+F F+ST IL
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILFWPSSSWGSYFMSTPIL 134
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 47.2 bits (107), Expect = 3e-04
Identities = 37/140 (26%), Positives = 44/140 (31%)
Frame = +1
Query: 82 IWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YR 261
I KL P NK +KIL TPL Y N C K C + +NSLP Y
Sbjct: 62 IRKLNTPSNIGSTSHGFPPNKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYL 121
Query: 262 T*RKIRRSCYFFTTFSXXXXXXXXXXXXXXXXXXTXXXXXXXXXXXXCMSCRDYSXXXXX 441
T R +F T CM +YS
Sbjct: 122 TLGPFRSYNHFCPTSCSSVFNSSLNQLYYNNHQYARYSNNPWTNPSVCMKSNNYSCTSTS 181
Query: 442 XTTCFSWSYYNIINRSKLKY 501
+ S+YNI K KY
Sbjct: 182 FSPSIGSSHYNITYWPKPKY 201
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 45.6 bits (103), Expect = 0.001
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +2
Query: 560 FFGHPEVYILILPGFGIIXH 619
FFGHPEVYILILPGFG+I H
Sbjct: 2 FFGHPEVYILILPGFGMISH 21
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 42.3 bits (95), Expect = 0.009
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2
Query: 560 FFGHPEVYILILPGFGIIXH 619
FFGHPEVY+LILP FGI+ H
Sbjct: 1 FFGHPEVYVLILPVFGIVSH 20
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 40.3 bits (90), Expect = 0.036
Identities = 27/78 (34%), Positives = 35/78 (44%)
Frame = +2
Query: 269 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 448
G L IFSL + S + D++ L ++ ITA
Sbjct: 124 GSXXXLXIFSLXIXXXSXIFSAXNFISXIINMRHTMLTMDKISLLSWSILITAVLLLLSL 183
Query: 449 XXXAGAITILLTDRNLNT 502
AGAIT+LLTDRN+NT
Sbjct: 184 PVLAGAITMLLTDRNMNT 201
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 37.9 bits (84), Expect = 0.19
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +1
Query: 547 TFILIFWTS*SLYFNFTRIWYNXSY 621
+ ++IFW+S SLYFN IWYN Y
Sbjct: 2 SLVMIFWSSSSLYFNSPSIWYNFPY 26
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 33.9 bits (74), Expect = 3.1
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 524 GGDPILYQHLF*FFGHPEVYILILPGF 604
G DP+L + LF F GHP VY +LP +
Sbjct: 224 GTDPVLARTLFWFTGHPIVYFWLLPAY 250
>UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7;
Locustacarus buchneri|Rep: Cytochrome oxidase subunit 1
- Locustacarus buchneri
Length = 185
Score = 33.9 bits (74), Expect = 3.1
Identities = 23/62 (37%), Positives = 30/62 (48%)
Frame = +1
Query: 418 DYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFT 597
+Y+ TT S S +N N SKL++I+ S PN I ILI T L+ N T
Sbjct: 94 NYNNTTDYFTTSSSRSNHNTTNSSKLQHILLRSFGGSGPNPIPASILILRTPSGLHSNST 153
Query: 598 RI 603
I
Sbjct: 154 SI 155
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 33.5 bits (73), Expect = 4.2
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 530 DPILYQHLF*FFGHPEVYILILPGF 604
+P+L + LF FFGHP VY +LP +
Sbjct: 209 NPLLARTLFWFFGHPVVYFWLLPAY 233
>UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 1420
Score = 32.7 bits (71), Expect = 7.3
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -1
Query: 489 RSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDILFN 367
+++NN +I S NNN N++ T TN + +N+I +N
Sbjct: 1038 KTINNNIINDTSQSSYNNNMNSIQNTNRTNSSSSNNNISYN 1078
>UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3;
n=1; Candida albicans|Rep: Putative uncharacterized
protein CLN3 - Candida albicans (Yeast)
Length = 785
Score = 32.7 bits (71), Expect = 7.3
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = -1
Query: 543 YKIGSPPPAGSKNDVFKFRSVNN---IVIAPAKTGSDNNNKNAVIPTAH 406
Y++ +PP + +KN K S NN IA T ++NNN N+ +P H
Sbjct: 572 YQMVTPPNSANKNSN-KSNSANNNNTTTIATTTTTTNNNNNNSQLPAPH 619
>UniRef50_Q8ID15 Cluster: Putative uncharacterized protein
MAL13P1.352; n=2; Plasmodium|Rep: Putative
uncharacterized protein MAL13P1.352 - Plasmodium
falciparum (isolate 3D7)
Length = 1106
Score = 32.3 bits (70), Expect = 9.6
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 166 TPLPYIINFKKNCRKWCRN 222
T L Y + KK+CRKWCRN
Sbjct: 697 TKLMYCVIKKKHCRKWCRN 715
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 32.3 bits (70), Expect = 9.6
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +2
Query: 575 EVYILILPGFGIIXH 619
EVYILILPGFG+I H
Sbjct: 155 EVYILILPGFGMISH 169
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 445,336,002
Number of Sequences: 1657284
Number of extensions: 7746238
Number of successful extensions: 18408
Number of sequences better than 10.0: 110
Number of HSP's better than 10.0 without gapping: 16852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18155
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45221970467
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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