Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_N05
(646 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L18972-1|AAC26837.1| 683|Homo sapiens anonymous protein. 118 2e-26
CR456542-1|CAG30428.1| 683|Homo sapiens PK1.3 protein. 118 2e-26
BC003615-1|AAH03615.1| 683|Homo sapiens THO complex 5 protein. 118 2e-26
AB023200-1|BAA76827.2| 687|Homo sapiens KIAA0983 protein protein. 118 2e-26
BC048347-1|AAH48347.1| 898|Homo sapiens kinesin family member 1... 31 2.7
AY791349-1|AAX16185.1| 898|Homo sapiens kinesin-related protein... 31 2.7
AB062483-1|BAB93508.1| 898|Homo sapiens OK/SW-CL.108 protein. 31 2.7
>L18972-1|AAC26837.1| 683|Homo sapiens anonymous protein.
Length = 683
Score = 118 bits (283), Expect = 2e-26
Identities = 59/135 (43%), Positives = 74/135 (54%)
Frame = +1
Query: 238 EEAEAHLRPADKDAAFFNKTCQDIRXLFKEIXXXXXXXXXXXXXXXXXXRVEASXXXXXX 417
EEAE LR +D + TCQ+++ L EI R+++
Sbjct: 39 EEAEVDLRDPGRDYELYKYTCQELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTL 98
Query: 418 XXXXXXEKVRTRAGRDALHKEKQRVDSTHLLLXNLLYEADHLXKEVTKCLQFXSKDEEID 597
+R + GRD H+ KQ+VD+ HL L NLLYE HL KE+TKCL+F SK EEID
Sbjct: 99 KKLNRLAHIRLKKGRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEID 158
Query: 598 LVPLEEFYKNAPPDI 642
LV LEEFYK APPDI
Sbjct: 159 LVSLEEFYKEAPPDI 173
>CR456542-1|CAG30428.1| 683|Homo sapiens PK1.3 protein.
Length = 683
Score = 118 bits (283), Expect = 2e-26
Identities = 59/135 (43%), Positives = 74/135 (54%)
Frame = +1
Query: 238 EEAEAHLRPADKDAAFFNKTCQDIRXLFKEIXXXXXXXXXXXXXXXXXXRVEASXXXXXX 417
EEAE LR +D + TCQ+++ L EI R+++
Sbjct: 39 EEAEVDLRDPGRDYELYKYTCQELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTL 98
Query: 418 XXXXXXEKVRTRAGRDALHKEKQRVDSTHLLLXNLLYEADHLXKEVTKCLQFXSKDEEID 597
+R + GRD H+ KQ+VD+ HL L NLLYE HL KE+TKCL+F SK EEID
Sbjct: 99 KKLNRLAHIRLKKGRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEID 158
Query: 598 LVPLEEFYKNAPPDI 642
LV LEEFYK APPDI
Sbjct: 159 LVSLEEFYKEAPPDI 173
>BC003615-1|AAH03615.1| 683|Homo sapiens THO complex 5 protein.
Length = 683
Score = 118 bits (283), Expect = 2e-26
Identities = 59/135 (43%), Positives = 74/135 (54%)
Frame = +1
Query: 238 EEAEAHLRPADKDAAFFNKTCQDIRXLFKEIXXXXXXXXXXXXXXXXXXRVEASXXXXXX 417
EEAE LR +D + TCQ+++ L EI R+++
Sbjct: 39 EEAEVDLRDPGRDYELYKYTCQELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTL 98
Query: 418 XXXXXXEKVRTRAGRDALHKEKQRVDSTHLLLXNLLYEADHLXKEVTKCLQFXSKDEEID 597
+R + GRD H+ KQ+VD+ HL L NLLYE HL KE+TKCL+F SK EEID
Sbjct: 99 KKLNRLAHIRLKKGRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEID 158
Query: 598 LVPLEEFYKNAPPDI 642
LV LEEFYK APPDI
Sbjct: 159 LVSLEEFYKEAPPDI 173
>AB023200-1|BAA76827.2| 687|Homo sapiens KIAA0983 protein protein.
Length = 687
Score = 118 bits (283), Expect = 2e-26
Identities = 59/135 (43%), Positives = 74/135 (54%)
Frame = +1
Query: 238 EEAEAHLRPADKDAAFFNKTCQDIRXLFKEIXXXXXXXXXXXXXXXXXXRVEASXXXXXX 417
EEAE LR +D + TCQ+++ L EI R+++
Sbjct: 43 EEAEVDLRDPGRDYELYKYTCQELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTL 102
Query: 418 XXXXXXEKVRTRAGRDALHKEKQRVDSTHLLLXNLLYEADHLXKEVTKCLQFXSKDEEID 597
+R + GRD H+ KQ+VD+ HL L NLLYE HL KE+TKCL+F SK EEID
Sbjct: 103 KKLNRLAHIRLKKGRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEID 162
Query: 598 LVPLEEFYKNAPPDI 642
LV LEEFYK APPDI
Sbjct: 163 LVSLEEFYKEAPPDI 177
>BC048347-1|AAH48347.1| 898|Homo sapiens kinesin family member 18A
protein.
Length = 898
Score = 31.5 bits (68), Expect = 2.7
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 142 TAVKKRRKLNTSTSNDG-TKPVPVDVYKRVVEFEEAEAHLR 261
TA K++RKL +STSN T V KRV + +E HL+
Sbjct: 825 TAAKRKRKLTSSTSNSSLTADVNSGFAKRVRQDNSSEKHLQ 865
>AY791349-1|AAX16185.1| 898|Homo sapiens kinesin-related protein
protein.
Length = 898
Score = 31.5 bits (68), Expect = 2.7
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 142 TAVKKRRKLNTSTSNDG-TKPVPVDVYKRVVEFEEAEAHLR 261
TA K++RKL +STSN T V KRV + +E HL+
Sbjct: 825 TAAKRKRKLTSSTSNSSLTADVNSGFAKRVRQDNSSEKHLQ 865
>AB062483-1|BAB93508.1| 898|Homo sapiens OK/SW-CL.108 protein.
Length = 898
Score = 31.5 bits (68), Expect = 2.7
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 142 TAVKKRRKLNTSTSNDG-TKPVPVDVYKRVVEFEEAEAHLR 261
TA K++RKL +STSN T V KRV + +E HL+
Sbjct: 825 TAAKRKRKLTSSTSNSSLTADVNSGFAKRVRQDNSSEKHLQ 865
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,881,701
Number of Sequences: 237096
Number of extensions: 1045600
Number of successful extensions: 2087
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2080
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -