Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_N01
(818 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70755-3|CAA94782.1| 475|Caenorhabditis elegans Hypothetical pr... 174 5e-44
U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I ho... 104 9e-23
L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophi... 104 9e-23
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ... 33 0.32
Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical pr... 32 0.57
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 31 0.99
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 31 0.99
U88311-8|AAB42341.2| 918|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z68014-2|CAA92024.1| 565|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical pr... 30 2.3
U10402-9|AAA19065.1| 892|Caenorhabditis elegans Gro-1 operon ge... 30 2.3
AY052769-1|AAL14108.1| 885|Caenorhabditis elegans GOP-1 protein. 30 2.3
AF039718-6|AAB96743.1| 249|Caenorhabditis elegans Hypothetical ... 30 2.3
AL110499-2|CAB57913.1| 297|Caenorhabditis elegans Hypothetical ... 29 3.0
AL110499-1|CAB57912.1| 325|Caenorhabditis elegans Hypothetical ... 29 3.0
AF163019-1|AAD49324.1| 1312|Caenorhabditis elegans trithorax-rel... 29 4.0
AF039718-1|AAB96746.1| 1312|Caenorhabditis elegans Abnormal cell... 29 4.0
AF038611-7|AAB92040.1| 466|Caenorhabditis elegans Hypothetical ... 28 7.0
AF026208-2|AAB71269.3| 774|Caenorhabditis elegans Prion-like-(q... 28 7.0
Z68115-2|CAA92167.1| 914|Caenorhabditis elegans Hypothetical pr... 28 9.2
U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical pr... 28 9.2
AC006631-1|AAF39793.2| 787|Caenorhabditis elegans Hypothetical ... 28 9.2
AC006607-9|AAF60368.2| 995|Caenorhabditis elegans Hypothetical ... 28 9.2
>Z70755-3|CAA94782.1| 475|Caenorhabditis elegans Hypothetical
protein K06A4.3 protein.
Length = 475
Score = 174 bits (424), Expect = 5e-44
Identities = 85/207 (41%), Positives = 123/207 (59%), Gaps = 1/207 (0%)
Frame = +1
Query: 193 PAFANVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDNRNNLSWDIHYWI 372
PA A +G+ G+ +WRI F PV + D G FY GD+YI L D WD+H+W+
Sbjct: 8 PALAEIGKKNGLLVWRINKFVLEPVPEVDHGVFYIGDAYIALYQKYDG----CWDVHFWL 63
Query: 373 GRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLTYLEGGNPSGF 552
G+ ++ DE G AAI TV +DD GG QHRE +ES LFLSYF + Y+ GG SG+
Sbjct: 64 GKNASTDEIGVAAIKTVEIDDSLGGIPTQHREIQNYESPLFLSYFPDGIRYVSGGYESGY 123
Query: 553 NHVVTNAGAQK-RMFQVKGKRDVRVRQVDPQIASMNKGDCFVLDLXNDIYVFVGEKAXNV 729
HV K +F KGKR+VR +V+ ++ S+N GD F+LDL D+YV++ ++ +
Sbjct: 124 RHVDDQFKNWKPHLFHCKGKRNVRCTEVECEVNSLNLGDVFILDLGKDLYVWMPPESGRL 183
Query: 730 XKLKAISFANQVRDQDHHGRGKVDIVD 810
++K ++ A + D + G KV I+D
Sbjct: 184 ERIKGMARAKNIADHERMGIPKVHILD 210
Score = 31.5 bits (68), Expect = 0.75
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +1
Query: 664 DCFVLDLXNDIYVFVGEKAXNVXKLKAISFANQVRDQDHHGRGKVDIVD 810
D +LD N IYV+VG A K +A++ A ++D R K +D
Sbjct: 388 DVMILDALNSIYVWVGANANANEKKEALNTAKLYLEKDKLPRHKKTAID 436
>U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I homolog
protein.
Length = 1257
Score = 104 bits (249), Expect = 9e-23
Identities = 59/202 (29%), Positives = 102/202 (50%), Gaps = 3/202 (1%)
Frame = +1
Query: 205 NVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDNRNNLSWDIHYWIGRES 384
+VG G+ +W I+NF P + + G+FY D+Y++L+TT + L I YW+G +
Sbjct: 503 DVGSDEGMWVWEIENFYPSIMDEAFHGQFYDADAYLVLKTTREASGQLRHAIFYWLGEHA 562
Query: 385 TQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLTYLEGGNP-SGFNHV 561
+ D+ +A+ VGL + RE M E+ FL+ F + Y+EGG SGF +
Sbjct: 563 SLDKGMCSAVHAVGLRNHLNATCRTQREEMNDETEEFLTLFGEEIVYIEGGRTISGF-YT 621
Query: 562 VTNAGAQKRMFQ--VKGKRDVRVRQVDPQIASMNKGDCFVLDLXNDIYVFVGEKAXNVXK 735
R+++ V G V + V + S++ CF+LD I+++ G K+
Sbjct: 622 TEKPAHLTRLYRAGVNGTA-VEMEPVPLSVESLDPRFCFLLDAGETIWIWSGYKSRITVS 680
Query: 736 LKAISFANQVRDQDHHGRGKVD 801
KA FA ++ +D G+ +++
Sbjct: 681 NKARLFAERLNKRDRKGKSEIE 702
>L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophila
flightless) homologprotein 1 protein.
Length = 1257
Score = 104 bits (249), Expect = 9e-23
Identities = 59/202 (29%), Positives = 102/202 (50%), Gaps = 3/202 (1%)
Frame = +1
Query: 205 NVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDNRNNLSWDIHYWIGRES 384
+VG G+ +W I+NF P + + G+FY D+Y++L+TT + L I YW+G +
Sbjct: 503 DVGSDEGMWVWEIENFYPSIMDEAFHGQFYDADAYLVLKTTREASGQLRHAIFYWLGEHA 562
Query: 385 TQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLTYLEGGNP-SGFNHV 561
+ D+ +A+ VGL + RE M E+ FL+ F + Y+EGG SGF +
Sbjct: 563 SLDKGMCSAVHAVGLRNHLNATCRTQREEMNDETEEFLTLFGEEIVYIEGGRTISGF-YT 621
Query: 562 VTNAGAQKRMFQ--VKGKRDVRVRQVDPQIASMNKGDCFVLDLXNDIYVFVGEKAXNVXK 735
R+++ V G V + V + S++ CF+LD I+++ G K+
Sbjct: 622 TEKPAHLTRLYRAGVNGTA-VEMEPVPLSVESLDPRFCFLLDAGETIWIWSGYKSRITVS 680
Query: 736 LKAISFANQVRDQDHHGRGKVD 801
KA FA ++ +D G+ +++
Sbjct: 681 NKARLFAERLNKRDRKGKSEIE 702
>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
protein Y51B11A.1 protein.
Length = 1079
Score = 32.7 bits (71), Expect = 0.32
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Frame = +2
Query: 287 NSTKEIHTSFYGRPRTIATIYHGTSTTG----SVESRRKTSQEPPQSS--PLAWTTSSGA 448
+ST + T+ P T +T +STT + + TS EPP SS P+ TT++
Sbjct: 91 SSTTPVQTTTTTAPETTSTEAPSSSTTPVQTTTTTAPETTSTEPPSSSTSPVQTTTTTAP 150
Query: 449 PRSSTERP 472
+STE P
Sbjct: 151 ETTSTEAP 158
Score = 32.7 bits (71), Expect = 0.32
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Frame = +2
Query: 287 NSTKEIHTSFYGRPRTIATIYHGTSTTG----SVESRRKTSQEPPQSS--PLAWTTSSGA 448
+ST + T+ P T +T +STT + + TS EPP SS P+ TT++
Sbjct: 137 SSTSPVQTTTTTAPETTSTEAPSSSTTPVQTTTTTAPETTSTEPPSSSTSPVQTTTTTAP 196
Query: 449 PRSSTERP 472
+STE P
Sbjct: 197 ETTSTEPP 204
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Frame = +2
Query: 287 NSTKEIHTSFYGRPRTIATIYHGTSTTG----SVESRRKTSQEPPQSS--PLAWTTSSGA 448
+ST + T+ P T +T +S T + + TS EPP SS P+ TT++
Sbjct: 804 SSTSPVQTTTITAPETTSTEPPSSSNTPVQTTTTTAPETTSTEPPSSSTSPVQTTTTTAP 863
Query: 449 PRSSTERP 472
+STE P
Sbjct: 864 ETTSTEPP 871
Score = 29.9 bits (64), Expect = 2.3
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Frame = +2
Query: 287 NSTKEIHTSFYGRPRTIATIYHGTSTTG----SVESRRKTSQEPPQSS--PLAWTTSSGA 448
+ST + T+ P T +T +S T + + TS EPP SS P+ TT++
Sbjct: 666 SSTTPVQTTTTTAPETTSTEPPSSSNTPVQTTTTTAPETTSTEPPSSSTSPVQTTTTTAP 725
Query: 449 PRSSTERP 472
+STE P
Sbjct: 726 ETTSTEPP 733
Score = 28.7 bits (61), Expect = 5.3
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Frame = +2
Query: 287 NSTKEIHTSFYGRPRTIATIYHGTSTTG----SVESRRKTSQEPPQSS--PLAWTTSSGA 448
+ST + T+ P T +T +S T + + TS EPP SS P+ TT +
Sbjct: 758 SSTTPVQTTTTTAPETTSTEPPSSSNTPVQTTTTTAPETTSTEPPSSSTSPVQTTTITAP 817
Query: 449 PRSSTERP 472
+STE P
Sbjct: 818 ETTSTEPP 825
>Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical
protein F26C11.3 protein.
Length = 1317
Score = 31.9 bits (69), Expect = 0.57
Identities = 26/102 (25%), Positives = 43/102 (42%)
Frame = +2
Query: 158 QIKTPVTKPKSTRLLPMSAEQPVCKYGEYRTSNQYPLLRRT*ENSTKEIHTSFYGRPRTI 337
Q TP T+P +T PM V + RTS P T S +S T
Sbjct: 318 QTTTPSTEPSTTITTPMEQSSTVSSVQKTRTSEDKPSSSTTVPTSASTSESS------TS 371
Query: 338 ATIYHGTSTTGSVESRRKTSQEPPQSSPLAWTTSSGAPRSST 463
+ + +S++ + +S ++ P+SS + T ++G ST
Sbjct: 372 SPMAETSSSSTTSQSSPASTSTVPESSTVGSTPTTGLTTLST 413
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical protein
F49E10.2a protein.
Length = 790
Score = 31.1 bits (67), Expect = 0.99
Identities = 33/147 (22%), Positives = 55/147 (37%), Gaps = 2/147 (1%)
Frame = +2
Query: 170 PVTKPKSTRLLPMSAEQPVCKYGEYRTSNQYPLLRRT*ENSTKEIHTSFYGRPRTIATIY 349
P T P ST + +P ++ T + + T+ +P T+ T
Sbjct: 604 PSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTATTTPQPTTTTTSEKPVTLTTQT 663
Query: 350 HGTSTTGSVESRRKTSQEPPQSSPLA--WTTSSGAPRSSTERPWVTKALCSYHISRHL*P 523
T +V +R T Q P ++P W +G+ STE+PW K + L P
Sbjct: 664 WTAPPTTTV--KRTTPQTVPTTTPKIPRWWPLAGS--GSTEQPWWQKVQTGQNTLPPLFP 719
Query: 524 IWRGGIRPVLTTSSRTREPRNECSRSK 604
+ + V S++ E N+ K
Sbjct: 720 VSKRVEEKVEKVSAKPNESDNKIPEQK 746
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical protein
F49E10.2b protein.
Length = 842
Score = 31.1 bits (67), Expect = 0.99
Identities = 33/147 (22%), Positives = 55/147 (37%), Gaps = 2/147 (1%)
Frame = +2
Query: 170 PVTKPKSTRLLPMSAEQPVCKYGEYRTSNQYPLLRRT*ENSTKEIHTSFYGRPRTIATIY 349
P T P ST + +P ++ T + + T+ +P T+ T
Sbjct: 604 PSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTATTTPQPTTTTTSEKPVTLTTQT 663
Query: 350 HGTSTTGSVESRRKTSQEPPQSSPLA--WTTSSGAPRSSTERPWVTKALCSYHISRHL*P 523
T +V +R T Q P ++P W +G+ STE+PW K + L P
Sbjct: 664 WTAPPTTTV--KRTTPQTVPTTTPKIPRWWPLAGS--GSTEQPWWQKVQTGQNTLPPLFP 719
Query: 524 IWRGGIRPVLTTSSRTREPRNECSRSK 604
+ + V S++ E N+ K
Sbjct: 720 VSKRVEEKVEKVSAKPNESDNKIPEQK 746
>U88311-8|AAB42341.2| 918|Caenorhabditis elegans Hypothetical
protein C10H11.1 protein.
Length = 918
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/52 (30%), Positives = 30/52 (57%)
Frame = +1
Query: 589 MFQVKGKRDVRVRQVDPQIASMNKGDCFVLDLXNDIYVFVGEKAXNVXKLKA 744
+ QV+G ++V VR V P ++S+++ CFV+ + + G + + K KA
Sbjct: 221 LIQVRGSKNVDVRLVAPAMSSVHEVACFVVVHQKHLMKYEGLYSNILEKTKA 272
>Z68014-2|CAA92024.1| 565|Caenorhabditis elegans Hypothetical
protein W04G3.2 protein.
Length = 565
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -3
Query: 264 GYWFEVLYSPYLHTG-CSADIGKSRVDFGFVTGVFI 160
G W++V+YSP + TG CS K D G TG +
Sbjct: 402 GQWYQVIYSPPVSTGPCSMVSYKKLSDNGEATGSIV 437
>Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical
protein ZK287.4 protein.
Length = 1208
Score = 29.9 bits (64), Expect = 2.3
Identities = 28/90 (31%), Positives = 38/90 (42%), Gaps = 8/90 (8%)
Frame = +2
Query: 251 SNQYPLLRRT*ENSTKEIHTSFYGRPRTIATIYHGT--STTGSVESRRKTSQEPPQ---S 415
S Q P LR T ++H SFY +++ H T STT S + T E P+
Sbjct: 146 SLQPPSLRTT---KPADVHESFYTVSPQTSSVPHPTTLSTTHSKQKPTTTEAEIPEVFDP 202
Query: 416 SPLAWTTSSGAPRSSTERPWV---TKALCS 496
+P + + G P S T W T CS
Sbjct: 203 NPCSLSPDKGFPGSVTVNMWYYDPTSTTCS 232
>U10402-9|AAA19065.1| 892|Caenorhabditis elegans Gro-1 operon gene
protein 1 protein.
Length = 892
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = -1
Query: 218 VLPTLAKAGWTLALSRAFLSDSDVIGPLIS*GLVAVRAQTDPSKTKRRH 72
V P KAGW + L D+ + G ++ V + PS+ K+RH
Sbjct: 726 VEPDSRKAGWAIVRFVGLLQDTTINGDSTDSKVLHVVVEGQPSRIKKRH 774
>AY052769-1|AAL14108.1| 885|Caenorhabditis elegans GOP-1 protein.
Length = 885
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = -1
Query: 218 VLPTLAKAGWTLALSRAFLSDSDVIGPLIS*GLVAVRAQTDPSKTKRRH 72
V P KAGW + L D+ + G ++ V + PS+ K+RH
Sbjct: 719 VEPDSRKAGWAIVRFVGLLQDTTINGDSTDSKVLHVVVEGQPSRIKKRH 767
>AF039718-6|AAB96743.1| 249|Caenorhabditis elegans Hypothetical
protein T12F5.1 protein.
Length = 249
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +1
Query: 112 TATKPQEISGPITSLSDKNARDKAKVHPAFANVGRTAGVQIWRIQNFEPIPVAQK 276
T K QE+ GP+ D+ D AK ++ R G QNF+ I + +K
Sbjct: 171 TPEKGQEVEGPVEEFDDETNEDVAKAR-SYNPAARKLGGSSKSDQNFQKINLRKK 224
>AL110499-2|CAB57913.1| 297|Caenorhabditis elegans Hypothetical
protein Y62F5A.1b protein.
Length = 297
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +2
Query: 317 YGRPRTIATIYHGTSTTGSVESRRKTSQEPPQSSPLAWTTSSGAPRSS 460
Y R T A I T + S+R + PP S+P+ SS P SS
Sbjct: 191 YNRDET-AKIVKSILTGEGIRSQRTMAPAPPSSAPMTTAPSSTGPSSS 237
>AL110499-1|CAB57912.1| 325|Caenorhabditis elegans Hypothetical
protein Y62F5A.1a protein.
Length = 325
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +2
Query: 317 YGRPRTIATIYHGTSTTGSVESRRKTSQEPPQSSPLAWTTSSGAPRSS 460
Y R T A I T + S+R + PP S+P+ SS P SS
Sbjct: 191 YNRDET-AKIVKSILTGEGIRSQRTMAPAPPSSAPMTTAPSSTGPSSS 237
>AF163019-1|AAD49324.1| 1312|Caenorhabditis elegans trithorax-related
protein LIN-59 protein.
Length = 1312
Score = 29.1 bits (62), Expect = 4.0
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +2
Query: 395 SQEPPQSSPLAWTTSSGAPRSSTE-RPWV-TKALCSYHISRHL*PIWRGGIR 544
S +PP++S + T+S P+SS++ P V TK L HI R L + + G R
Sbjct: 1259 SPKPPKTSSIPSTSSIDPPQSSSDGLPEVDTKKLSKRHIQRVLKRLVKNGSR 1310
>AF039718-1|AAB96746.1| 1312|Caenorhabditis elegans Abnormal cell
lineage protein 59 protein.
Length = 1312
Score = 29.1 bits (62), Expect = 4.0
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +2
Query: 395 SQEPPQSSPLAWTTSSGAPRSSTE-RPWV-TKALCSYHISRHL*PIWRGGIR 544
S +PP++S + T+S P+SS++ P V TK L HI R L + + G R
Sbjct: 1259 SPKPPKTSSIPSTSSIDPPQSSSDGLPEVDTKKLSKRHIQRVLKRLVKNGSR 1310
>AF038611-7|AAB92040.1| 466|Caenorhabditis elegans Hypothetical
protein E04A4.6 protein.
Length = 466
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 208 VGRTAGVQIWRIQNFEPIPVAQKDIGKFYKG 300
VG AG Q +R++ P+P A +G Y G
Sbjct: 259 VGYKAGEQTYRVKGSIPVPFAVPTLGNCYSG 289
>AF026208-2|AAB71269.3| 774|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 40
protein.
Length = 774
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +2
Query: 338 ATIYHGTSTTGSVESRRKTSQEPPQSSPLAWTTSSGAPRSSTER 469
AT +H + ++ + S PP P A T SSG SS +R
Sbjct: 700 ATGHHQAHAIRTYQATKSASVTPPNPQPSAATRSSGRVSSSKKR 743
>Z68115-2|CAA92167.1| 914|Caenorhabditis elegans Hypothetical
protein F19H6.3 protein.
Length = 914
Score = 27.9 bits (59), Expect = 9.2
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = +2
Query: 389 KTSQEPPQSSPLAWTTSSGAPRSSTERPWVTKALCSYHISRHL*PIWRGG---IRPVLTT 559
+ SQ P +SP++ T +G S+ P V K + ++L PI+RGG ++ +
Sbjct: 701 EASQSP--ASPIS--TDTGLSTSTVYPPAVQKNVSEVQSRQNLAPIFRGGPKHLKKAQLS 756
Query: 560 SSRTREPRNECSRS 601
S E NE RS
Sbjct: 757 SEMQFEHANEIERS 770
>U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical
protein F59A6.3 protein.
Length = 786
Score = 27.9 bits (59), Expect = 9.2
Identities = 23/85 (27%), Positives = 35/85 (41%)
Frame = +2
Query: 209 SAEQPVCKYGEYRTSNQYPLLRRT*ENSTKEIHTSFYGRPRTIATIYHGTSTTGSVESRR 388
+ E PV + TS T E +T E TS YG ++ + + S ES
Sbjct: 146 TTEDPVSSTDQSSTSPHETTRDTTTEGTTSEDSTSTYGSTERSSSPKPTSEFSTSTESDF 205
Query: 389 KTSQEPPQSSPLAWTTSSGAPRSST 463
S +++ T SS +P S+T
Sbjct: 206 TESTRSSETTSSIETNSSTSPVSTT 230
>AC006631-1|AAF39793.2| 787|Caenorhabditis elegans Hypothetical
protein F27B3.5 protein.
Length = 787
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 474 GSRKRFVPIIFPDTFDLFGGGESVRF*PRRHERGSPETNV 593
GS K F I+ PD D+F G S RR+ +G + N+
Sbjct: 321 GSHKMFCSILPPDPVDIFLGVSSSHKDLRRYIKGEDKENM 360
>AC006607-9|AAF60368.2| 995|Caenorhabditis elegans Hypothetical
protein C09E7.7 protein.
Length = 995
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 474 GSRKRFVPIIFPDTFDLFGGGESVRF*PRRHERGSPETNV 593
GS K F I+ PD D+F G S RR+ +G + N+
Sbjct: 528 GSHKMFCSILPPDPVDIFLGVSSSHKDLRRYIKGEDKENM 567
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,234,599
Number of Sequences: 27780
Number of extensions: 428939
Number of successful extensions: 1420
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1418
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2019417216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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