Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_M20
         (613 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   3.5  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   3.5  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   6.2  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   6.2  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   8.2  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   8.2  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   8.2  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   8.2  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +1

Query: 316 RYTHHGPHARPARSPQDC 369
           R   HGPH   ARS + C
Sbjct: 599 RRNFHGPHRLAARSRRCC 616


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +1

Query: 316 RYTHHGPHARPARSPQDC 369
           R   HGPH   ARS + C
Sbjct: 491 RRNFHGPHRLAARSRRCC 508


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = -3

Query: 137 TYYSHMLDF*LDPRYNSADYNCQRXDF 57
           T Y H L++ L     S  + C + D+
Sbjct: 240 TEYKHHLEYHLRNHAGSKPFQCNKCDY 266


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 5/16 (31%), Positives = 11/16 (68%)
 Frame = -1

Query: 106 WTPAITLLIIIAKGLI 59
           WTPA+  +++   G++
Sbjct: 120 WTPAVIFVVLSKNGIV 135


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +2

Query: 8   PILEIRTHGKAIRVGWGNQXFGNYNQQSYS 97
           PI+   T      + +GN  F   N Q+Y+
Sbjct: 75  PIINTETGLSYTNLDYGNSNFPPINHQNYN 104


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 9/21 (42%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
 Frame = -2

Query: 609 YRGV-APFPSPSPPHKSMDHN 550
           Y G   P  SP+PP  SM ++
Sbjct: 313 YSGTPTPMMSPAPPQDSMGYS 333


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +2

Query: 8   PILEIRTHGKAIRVGWGNQXFGNYNQQSYS 97
           PI+   T      + +GN  F   N Q+Y+
Sbjct: 75  PIINTETGLSYTNLDYGNSNFPPINHQNYN 104


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +2

Query: 8   PILEIRTHGKAIRVGWGNQXFGNYNQQSYS 97
           PI+   T      + +GN  F   N Q+Y+
Sbjct: 75  PIINTETGLSYTNLDYGNSNFPPINHQNYN 104


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,854
Number of Sequences: 336
Number of extensions: 2877
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15561709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)