Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_M20
(613 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X79536-1|CAA56072.1| 320|Homo sapiens hnRNPcore protein A1 prot... 33 1.0
X12671-1|CAA31191.1| 320|Homo sapiens hnrnp a1 protein protein. 33 1.0
X06747-1|CAA29922.1| 320|Homo sapiens protein ( Human hnRNP cor... 33 1.0
X04347-1|CAA27874.1| 196|Homo sapiens protein ( Human liver mRN... 33 1.0
BC121133-1|AAI21134.1| 320|Homo sapiens heterogeneous nuclear r... 33 1.0
BC104237-1|AAI04238.1| 167|Homo sapiens HNRPA1 protein protein. 33 1.0
BC104236-1|AAI04237.1| 167|Homo sapiens HNRPA1 protein protein. 33 1.0
BC103707-1|AAI03708.1| 267|Homo sapiens HNRPA1 protein protein. 33 1.0
BC074502-1|AAH74502.1| 320|Homo sapiens heterogeneous nuclear r... 33 1.0
BC073162-1|AAH73162.1| 320|Homo sapiens heterogeneous nuclear r... 33 1.0
BC071945-1|AAH71945.1| 320|Homo sapiens heterogeneous nuclear r... 33 1.0
BC070315-1|AAH70315.1| 320|Homo sapiens HNRPA1 protein protein. 33 1.0
BC052296-1|AAH52296.1| 320|Homo sapiens heterogeneous nuclear r... 33 1.0
BC033714-1|AAH33714.1| 320|Homo sapiens heterogeneous nuclear r... 33 1.0
BC012158-1|AAH12158.1| 320|Homo sapiens heterogeneous nuclear r... 33 1.0
BC009600-1|AAH09600.1| 320|Homo sapiens heterogeneous nuclear r... 33 1.0
BC004945-1|AAH04945.1| 298|Homo sapiens Unknown (protein for IM... 33 1.0
BC002355-1|AAH02355.1| 320|Homo sapiens heterogeneous nuclear r... 33 1.0
AL137058-3|CAI16736.1| 320|Homo sapiens protein ( Human DNA seq... 33 1.0
U09123-1|AAB60650.1| 341|Homo sapiens hnRNP protein A2 protein. 31 4.2
M29065-1|AAA36574.1| 341|Homo sapiens protein ( Human hnRNP A2 ... 31 4.2
M29064-1|AAA60271.1| 353|Homo sapiens SNRPB1 protein. 31 4.2
D28877-2|BAA06032.1| 341|Homo sapiens hnRNP A2 protein protein. 31 4.2
D28877-1|BAA06031.1| 353|Homo sapiens hnRNP B1 protein protein. 31 4.2
BC108266-1|AAI08267.1| 320|Homo sapiens heterogeneous nuclear r... 30 7.4
>X79536-1|CAA56072.1| 320|Homo sapiens hnRNPcore protein A1
protein.
Length = 320
Score = 32.7 bits (71), Expect = 1.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 50 GWGNQXFGNYNQQSYSGGPTRNQAYGNNRSTPY 148
G FGNYN QS + GP + +G S PY
Sbjct: 257 GGSYNDFGNYNNQSSNFGPMKGGNFGGRSSGPY 289
>X12671-1|CAA31191.1| 320|Homo sapiens hnrnp a1 protein protein.
Length = 320
Score = 32.7 bits (71), Expect = 1.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 50 GWGNQXFGNYNQQSYSGGPTRNQAYGNNRSTPY 148
G FGNYN QS + GP + +G S PY
Sbjct: 257 GGSYNDFGNYNNQSSNFGPMKGGNFGGRSSGPY 289
>X06747-1|CAA29922.1| 320|Homo sapiens protein ( Human hnRNP core
protein A1. ).
Length = 320
Score = 32.7 bits (71), Expect = 1.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 50 GWGNQXFGNYNQQSYSGGPTRNQAYGNNRSTPY 148
G FGNYN QS + GP + +G S PY
Sbjct: 257 GGSYNDFGNYNNQSSNFGPMKGGNFGGRSSGPY 289
>X04347-1|CAA27874.1| 196|Homo sapiens protein ( Human liver mRNA
fragment DNA binding protein UPI homologue
(C-terminus). ).
Length = 196
Score = 32.7 bits (71), Expect = 1.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 50 GWGNQXFGNYNQQSYSGGPTRNQAYGNNRSTPY 148
G FGNYN QS + GP + +G S PY
Sbjct: 133 GGSYNDFGNYNNQSSNFGPMKGGNFGGRSSGPY 165
>BC121133-1|AAI21134.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 32.7 bits (71), Expect = 1.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 50 GWGNQXFGNYNQQSYSGGPTRNQAYGNNRSTPY 148
G FGNYN QS + GP + +G S PY
Sbjct: 257 GGSYNDFGNYNNQSSNFGPMKGGNFGGRSSGPY 289
>BC104237-1|AAI04238.1| 167|Homo sapiens HNRPA1 protein protein.
Length = 167
Score = 32.7 bits (71), Expect = 1.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 50 GWGNQXFGNYNQQSYSGGPTRNQAYGNNRSTPY 148
G FGNYN QS + GP + +G S PY
Sbjct: 104 GGSYNDFGNYNNQSSNFGPMKGGNFGGRSSGPY 136
>BC104236-1|AAI04237.1| 167|Homo sapiens HNRPA1 protein protein.
Length = 167
Score = 32.7 bits (71), Expect = 1.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 50 GWGNQXFGNYNQQSYSGGPTRNQAYGNNRSTPY 148
G FGNYN QS + GP + +G S PY
Sbjct: 104 GGSYNDFGNYNNQSSNFGPMKGGNFGGRSSGPY 136
>BC103707-1|AAI03708.1| 267|Homo sapiens HNRPA1 protein protein.
Length = 267
Score = 32.7 bits (71), Expect = 1.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 50 GWGNQXFGNYNQQSYSGGPTRNQAYGNNRSTPY 148
G FGNYN QS + GP + +G S PY
Sbjct: 204 GGSYNDFGNYNNQSSNFGPMKGGNFGGRSSGPY 236
>BC074502-1|AAH74502.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 32.7 bits (71), Expect = 1.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 50 GWGNQXFGNYNQQSYSGGPTRNQAYGNNRSTPY 148
G FGNYN QS + GP + +G S PY
Sbjct: 257 GGSYNDFGNYNNQSSNFGPMKGGNFGGRSSGPY 289
>BC073162-1|AAH73162.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 32.7 bits (71), Expect = 1.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 50 GWGNQXFGNYNQQSYSGGPTRNQAYGNNRSTPY 148
G FGNYN QS + GP + +G S PY
Sbjct: 257 GGSYNDFGNYNNQSSNFGPMKGGNFGGRSSGPY 289
>BC071945-1|AAH71945.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 32.7 bits (71), Expect = 1.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 50 GWGNQXFGNYNQQSYSGGPTRNQAYGNNRSTPY 148
G FGNYN QS + GP + +G S PY
Sbjct: 257 GGSYNDFGNYNNQSSNFGPMKGGNFGGRSSGPY 289
>BC070315-1|AAH70315.1| 320|Homo sapiens HNRPA1 protein protein.
Length = 320
Score = 32.7 bits (71), Expect = 1.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 50 GWGNQXFGNYNQQSYSGGPTRNQAYGNNRSTPY 148
G FGNYN QS + GP + +G S PY
Sbjct: 257 GGSYNDFGNYNNQSSNFGPMKGGNFGGRSSGPY 289
>BC052296-1|AAH52296.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 32.7 bits (71), Expect = 1.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 50 GWGNQXFGNYNQQSYSGGPTRNQAYGNNRSTPY 148
G FGNYN QS + GP + +G S PY
Sbjct: 257 GGSYNDFGNYNNQSSNFGPMKGGNFGGRSSGPY 289
>BC033714-1|AAH33714.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 32.7 bits (71), Expect = 1.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 50 GWGNQXFGNYNQQSYSGGPTRNQAYGNNRSTPY 148
G FGNYN QS + GP + +G S PY
Sbjct: 257 GGSYNDFGNYNNQSSNFGPMKGGNFGGRSSGPY 289
>BC012158-1|AAH12158.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 32.7 bits (71), Expect = 1.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 50 GWGNQXFGNYNQQSYSGGPTRNQAYGNNRSTPY 148
G FGNYN QS + GP + +G S PY
Sbjct: 257 GGSYNDFGNYNNQSSNFGPMKGGNFGGRSSGPY 289
>BC009600-1|AAH09600.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 32.7 bits (71), Expect = 1.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 50 GWGNQXFGNYNQQSYSGGPTRNQAYGNNRSTPY 148
G FGNYN QS + GP + +G S PY
Sbjct: 257 GGSYNDFGNYNNQSSNFGPMKGGNFGGRSSGPY 289
>BC004945-1|AAH04945.1| 298|Homo sapiens Unknown (protein for
IMAGE:3615335) protein.
Length = 298
Score = 32.7 bits (71), Expect = 1.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 50 GWGNQXFGNYNQQSYSGGPTRNQAYGNNRSTPY 148
G FGNYN QS + GP + +G S PY
Sbjct: 235 GGSYNDFGNYNNQSSNFGPMKGGNFGGRSSGPY 267
>BC002355-1|AAH02355.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 32.7 bits (71), Expect = 1.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 50 GWGNQXFGNYNQQSYSGGPTRNQAYGNNRSTPY 148
G FGNYN QS + GP + +G S PY
Sbjct: 257 GGSYNDFGNYNNQSSNFGPMKGGNFGGRSSGPY 289
>AL137058-3|CAI16736.1| 320|Homo sapiens protein ( Human DNA
sequence from clone RP11-78J21 on chromosome
13q32.2-33.3 Contains 2 novel genes, a pseudogene
similar to part of TPTE and ).
Length = 320
Score = 32.7 bits (71), Expect = 1.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 50 GWGNQXFGNYNQQSYSGGPTRNQAYGNNRSTPY 148
G FGNYN QS + GP + +G S PY
Sbjct: 257 GGSYNDFGNYNNQSSNFGPMKGGNFGGRSSGPY 289
>U09123-1|AAB60650.1| 341|Homo sapiens hnRNP protein A2 protein.
Length = 341
Score = 30.7 bits (66), Expect = 4.2
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +2
Query: 50 GWGN-QXFGNYNQQSYSGGPTRNQAYGNNRS 139
G GN FGNYNQQ + GP ++ +G +R+
Sbjct: 284 GSGNYNDFGNYNQQPSNYGPMKSGNFGGSRN 314
>M29065-1|AAA36574.1| 341|Homo sapiens protein ( Human hnRNP A2
protein mRNA. ).
Length = 341
Score = 30.7 bits (66), Expect = 4.2
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +2
Query: 50 GWGN-QXFGNYNQQSYSGGPTRNQAYGNNRS 139
G GN FGNYNQQ + GP ++ +G +R+
Sbjct: 284 GSGNYNDFGNYNQQPSNYGPMKSGNFGGSRN 314
>M29064-1|AAA60271.1| 353|Homo sapiens SNRPB1 protein.
Length = 353
Score = 30.7 bits (66), Expect = 4.2
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +2
Query: 50 GWGN-QXFGNYNQQSYSGGPTRNQAYGNNRS 139
G GN FGNYNQQ + GP ++ +G +R+
Sbjct: 296 GSGNYNDFGNYNQQPSNYGPMKSGNFGGSRN 326
>D28877-2|BAA06032.1| 341|Homo sapiens hnRNP A2 protein protein.
Length = 341
Score = 30.7 bits (66), Expect = 4.2
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +2
Query: 50 GWGN-QXFGNYNQQSYSGGPTRNQAYGNNRS 139
G GN FGNYNQQ + GP ++ +G +R+
Sbjct: 284 GSGNYNDFGNYNQQPSNYGPMKSGNFGGSRN 314
>D28877-1|BAA06031.1| 353|Homo sapiens hnRNP B1 protein protein.
Length = 353
Score = 30.7 bits (66), Expect = 4.2
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +2
Query: 50 GWGN-QXFGNYNQQSYSGGPTRNQAYGNNRS 139
G GN FGNYNQQ + GP ++ +G +R+
Sbjct: 296 GSGNYNDFGNYNQQPSNYGPMKSGNFGGSRN 326
>BC108266-1|AAI08267.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1-like protein.
Length = 320
Score = 29.9 bits (64), Expect = 7.4
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +2
Query: 50 GWGNQXFGNYNQQSYSGGPTRNQAYGNNRSTP 145
G FGNYN QS + GP + +G S P
Sbjct: 257 GGSYNDFGNYNNQSSNFGPMKGGNFGGRSSGP 288
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,604,766
Number of Sequences: 237096
Number of extensions: 1802734
Number of successful extensions: 4604
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 4433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4604
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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