Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_M20
         (613 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93396-6|CAB07715.1|  109|Caenorhabditis elegans Hypothetical pr...    29   3.5  
U29096-1|AAA68406.1|  105|Caenorhabditis elegans Neuropeptide-li...    23   4.9  

>Z93396-6|CAB07715.1|  109|Caenorhabditis elegans Hypothetical
           protein ZC15.8 protein.
          Length = 109

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +2

Query: 68  FGNYNQQSYSGGPTRNQAYGNNR 136
           F  Y QQ Y   P  NQ Y NN+
Sbjct: 15  FAQYQQQQYQQQPYNNQQYSNNQ 37


>U29096-1|AAA68406.1|  105|Caenorhabditis elegans Neuropeptide-like
           protein protein32 protein.
          Length = 105

 Score = 23.4 bits (48), Expect(2) = 4.9
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 556 VHRFMGWGRGGEWG 597
           V R+ GWG  G WG
Sbjct: 52  VKRYGGWGGRGGWG 65



 Score = 23.4 bits (48), Expect(2) = 4.9
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +1

Query: 571 GWGRGGEWGY 600
           GWGRGG  GY
Sbjct: 63  GWGRGGGRGY 72


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,173,356
Number of Sequences: 27780
Number of extensions: 248710
Number of successful extensions: 635
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 635
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)