Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_M19
         (576 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4UAK5 Cluster: Putative uncharacterized protein; n=1; ...    34   2.1  
UniRef50_Q9CL20 Cluster: Putative uncharacterized protein PM1428...    34   2.8  
UniRef50_Q9GQ49 Cluster: Polyprotein; n=22; Dictyostelium discoi...    34   2.8  
UniRef50_Q97YW5 Cluster: Putative uncharacterized protein; n=1; ...    33   3.6  
UniRef50_Q9EMF0 Cluster: AMV256; n=1; Amsacta moorei entomopoxvi...    33   6.4  
UniRef50_Q7RIR5 Cluster: Maebl; n=3; Plasmodium (Vinckeia)|Rep: ...    33   6.4  
UniRef50_Q05FK9 Cluster: Putative GTPase; n=1; Candidatus Carson...    32   8.4  

>UniRef50_Q4UAK5 Cluster: Putative uncharacterized protein; n=1;
           Theileria annulata|Rep: Putative uncharacterized protein
           - Theileria annulata
          Length = 1166

 Score = 34.3 bits (75), Expect = 2.1
 Identities = 22/78 (28%), Positives = 37/78 (47%)
 Frame = -3

Query: 382 SYLNHKIDDKLNYLPKITKCTKTCTYAIIFLYLIGLVQFSININNNNYDVKSIRNVGIL* 203
           +Y+N  + DK NY P I +   TC   II + L+ ++ F+    NNN+  ++   +  + 
Sbjct: 278 TYVNKYMIDKNNYFP-IVQTLVTCLIIIILIILLLIILFT----NNNFITRNTNFINFIN 332

Query: 202 ITIN*KFV*VTFIFCNIK 149
              N       F F N+K
Sbjct: 333 TNTNFNNTNTNFNFINLK 350


>UniRef50_Q9CL20 Cluster: Putative uncharacterized protein PM1428;
           n=1; Pasteurella multocida|Rep: Putative uncharacterized
           protein PM1428 - Pasteurella multocida
          Length = 805

 Score = 33.9 bits (74), Expect = 2.8
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -3

Query: 367 KIDDKLNYLPKITKCTKTCTYAIIFLYLIGLVQFSININNNNY 239
           K+D  LNY+P     TK+  Y + F+   G V F+ N+    Y
Sbjct: 224 KLDKTLNYVPDTQNKTKSGNYGVAFIGERGYVGFAYNLRREKY 266


>UniRef50_Q9GQ49 Cluster: Polyprotein; n=22; Dictyostelium
           discoideum|Rep: Polyprotein - Dictyostelium discoideum
           (Slime mold)
          Length = 1144

 Score = 33.9 bits (74), Expect = 2.8
 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
 Frame = -3

Query: 394 FYAKSYLNHKIDDKLNYLPKITKCTKTCT------YAIIFLYLIGLVQFSININNNNYDV 233
           F+ +  +  K+DD +N L  +TKC  + +        I+  YL+  + F + IN  N D+
Sbjct: 738 FFNRKGVISKVDDTVNKLENLTKCYSSVSSTLKGRITILKSYLLSQLTFQLYINEIN-DI 796

Query: 232 KSIRNV 215
           K + NV
Sbjct: 797 KKLENV 802


>UniRef50_Q97YW5 Cluster: Putative uncharacterized protein; n=1;
           Sulfolobus solfataricus|Rep: Putative uncharacterized
           protein - Sulfolobus solfataricus
          Length = 269

 Score = 33.5 bits (73), Expect = 3.6
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = -3

Query: 385 KSYLNHKIDDKLNYLPKITKCTKTCTY-AIIFLYLIGLVQFSININNNNYDVKSIRN 218
           KS L +        LPK  K      Y AI+ L  +GL+Q +  +NNN +++  IRN
Sbjct: 12  KSLLENNGHITSRQLPKSKKVPMNQLYKAILILNKLGLIQINGELNNNKFELHLIRN 68


>UniRef50_Q9EMF0 Cluster: AMV256; n=1; Amsacta moorei entomopoxvirus
           'L'|Rep: AMV256 - Amsacta moorei entomopoxvirus (AmEPV)
          Length = 609

 Score = 32.7 bits (71), Expect = 6.4
 Identities = 19/91 (20%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
 Frame = -3

Query: 484 NVYTSLRLIMRMFPKEQFLRNSFKFLCNPLFYAKSYLNHKID-DKLNYLPKITKCTKTCT 308
           N  T +       P + +L N F     P+F A++  N KI+ +  N +  I        
Sbjct: 342 NSSTDINKFFLQIPNQLYLNNEFDINNIPVFKAETLFNSKINTNNKNKITNINNIEILNF 401

Query: 307 YAIIFLYLIGLVQFSININNNNYDVKSIRNV 215
                ++ + +++    I NN   +K+ +N+
Sbjct: 402 NVNNMIFFMNVIEDKFEIKNNEIIIKNTKNI 432


>UniRef50_Q7RIR5 Cluster: Maebl; n=3; Plasmodium (Vinckeia)|Rep:
           Maebl - Plasmodium yoelii yoelii
          Length = 850

 Score = 32.7 bits (71), Expect = 6.4
 Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
 Frame = -3

Query: 424 NSF-KFLCNPLFYAKS--YLNHKIDDKLNYLPKITKCTKTCTYAII-FLYLIGLVQFSIN 257
           N F KF  N L+  KS  + N+ I D   Y  K         Y I+ FL+ I  + FSI 
Sbjct: 16  NKFNKFEVNELYSNKSIRFTNNNIHDVFIYDIKTVDINNLINYIILNFLWNITKITFSIK 75

Query: 256 INNN 245
           +NNN
Sbjct: 76  LNNN 79


>UniRef50_Q05FK9 Cluster: Putative GTPase; n=1; Candidatus
           Carsonella ruddii PV|Rep: Putative GTPase - Carsonella
           ruddii (strain PV)
          Length = 254

 Score = 32.3 bits (70), Expect = 8.4
 Identities = 25/68 (36%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
 Frame = -3

Query: 391 YAKSYLNHKIDDKLNYLPKITKCTKTCTYAIIFLYLIGLVQFSININNNNYDVKSIRNVG 212
           Y K+Y N KI          TK  KT     +F+Y   +  F +NIN+NN DV  I  + 
Sbjct: 118 YFKNYFNKKI---------ATKGEKTKFVTCLFVYKFFIKSFVLNINSNNLDVFKINFIS 168

Query: 211 -IL*ITIN 191
            I  I IN
Sbjct: 169 KIYLIIIN 176


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 419,337,419
Number of Sequences: 1657284
Number of extensions: 7198191
Number of successful extensions: 16807
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16802
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39571085965
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)