Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_M19
         (576 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81481-6|CAB63435.1|  344|Caenorhabditis elegans Hypothetical pr...    31   0.44 
Z81545-8|CAB04444.1|  327|Caenorhabditis elegans Hypothetical pr...    29   2.4  
AL022288-9|CAK55188.1|  452|Caenorhabditis elegans Hypothetical ...    29   3.1  
AL022288-8|CAA18367.2|  402|Caenorhabditis elegans Hypothetical ...    29   3.1  
AF003386-6|AAK82897.1|  527|Caenorhabditis elegans Hypothetical ...    28   4.1  
AF003386-5|AAK82898.1|  529|Caenorhabditis elegans Hypothetical ...    28   4.1  
AC024817-16|AAF59585.2|  610|Caenorhabditis elegans Hypothetical...    28   5.5  
AF025463-2|AAB71006.1|  387|Caenorhabditis elegans Serpentine re...    27   7.2  

>Z81481-6|CAB63435.1|  344|Caenorhabditis elegans Hypothetical
           protein C38D9.8 protein.
          Length = 344

 Score = 31.5 bits (68), Expect = 0.44
 Identities = 19/55 (34%), Positives = 27/55 (49%)
 Frame = -3

Query: 430 LRNSFKFLCNPLFYAKSYLNHKIDDKLNYLPKITKCTKTCTYAIIFLYLIGLVQF 266
           L N FK   N L +  SY+ HK      +L +  K  ++C Y II  +  GL +F
Sbjct: 91  LENLFKVSLNTLSFGSSYMAHK------FLEQEEKMPRSCEYLIINEFSTGLDEF 139


>Z81545-8|CAB04444.1|  327|Caenorhabditis elegans Hypothetical
           protein F49H6.11 protein.
          Length = 327

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 12/50 (24%), Positives = 21/50 (42%)
 Frame = -1

Query: 438 NNFLEIHSNFYVILYFMLNLXXXXXXXXXXXTYLKSQNALKHAHMQLYFY 289
           N  + I S FY++LY  +N+           + +      +H H Q + Y
Sbjct: 179 NELMNITSGFYLVLYIAVNMFICLLTPFINISIITGMKKNRHLHSQQHIY 228


>AL022288-9|CAK55188.1|  452|Caenorhabditis elegans Hypothetical
           protein ZK1025.4b protein.
          Length = 452

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 13/70 (18%), Positives = 29/70 (41%)
 Frame = -3

Query: 481 VYTSLRLIMRMFPKEQFLRNSFKFLCNPLFYAKSYLNHKIDDKLNYLPKITKCTKTCTYA 302
           +Y ++  +   F  +  L+N         FY K Y++++       +  +  C K   Y 
Sbjct: 12  LYFTIFYVYPRFQNQSLLKNQINASFPITFYHKVYVDYRTSPPRLRIFSLNPCIKASNYL 71

Query: 301 IIFLYLIGLV 272
           ++ +Y  G +
Sbjct: 72  LVHVYYNGTI 81


>AL022288-8|CAA18367.2|  402|Caenorhabditis elegans Hypothetical
           protein ZK1025.4a protein.
          Length = 402

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 13/70 (18%), Positives = 29/70 (41%)
 Frame = -3

Query: 481 VYTSLRLIMRMFPKEQFLRNSFKFLCNPLFYAKSYLNHKIDDKLNYLPKITKCTKTCTYA 302
           +Y ++  +   F  +  L+N         FY K Y++++       +  +  C K   Y 
Sbjct: 12  LYFTIFYVYPRFQNQSLLKNQINASFPITFYHKVYVDYRTSPPRLRIFSLNPCIKASNYL 71

Query: 301 IIFLYLIGLV 272
           ++ +Y  G +
Sbjct: 72  LVHVYYNGTI 81


>AF003386-6|AAK82897.1|  527|Caenorhabditis elegans Hypothetical
           protein F59E12.4a protein.
          Length = 527

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -1

Query: 447 FQKNNFLEIHSNFYVILYFMLN 382
           F KN FLE  +NF+ +LY + N
Sbjct: 406 FSKNQFLEQATNFHFLLYLVTN 427


>AF003386-5|AAK82898.1|  529|Caenorhabditis elegans Hypothetical
           protein F59E12.4b protein.
          Length = 529

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -1

Query: 447 FQKNNFLEIHSNFYVILYFMLN 382
           F KN FLE  +NF+ +LY + N
Sbjct: 406 FSKNQFLEQATNFHFLLYLVTN 427


>AC024817-16|AAF59585.2|  610|Caenorhabditis elegans Hypothetical
           protein Y54G2A.13 protein.
          Length = 610

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = -3

Query: 301 IIFLYLIGLVQFSININNNNYDVKSIRN 218
           + F+  + LVQFSI + N + D++SI +
Sbjct: 10  LTFILFVVLVQFSIGLGNFSRDIRSIND 37


>AF025463-2|AAB71006.1|  387|Caenorhabditis elegans Serpentine
           receptor, class t protein54 protein.
          Length = 387

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = -3

Query: 331 TKCTKTCTYAIIFLYLIGLVQFSIN 257
           TKCT   T  ++FL ++ ++Q ++N
Sbjct: 67  TKCTHPSTQLMLFLSILDIIQLAVN 91


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,338,858
Number of Sequences: 27780
Number of extensions: 189695
Number of successful extensions: 457
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 457
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)