Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_M17
(744 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q16XI3 Cluster: Oligoribonuclease, mitochondrial; n=2; ... 140 4e-32
UniRef50_Q9Y3B8 Cluster: Oligoribonuclease, mitochondrial precur... 135 1e-30
UniRef50_Q9VCI0 Cluster: Probable oligoribonuclease; n=2; Sophop... 130 3e-29
UniRef50_Q4SLB2 Cluster: Chromosome 7 SCAF14557, whole genome sh... 128 1e-28
UniRef50_UPI00015B5C15 Cluster: PREDICTED: similar to ENSANGP000... 117 4e-25
UniRef50_Q17819 Cluster: Probable oligoribonuclease; n=2; Caenor... 116 6e-25
UniRef50_UPI0000DB7BA5 Cluster: PREDICTED: similar to Probable o... 116 8e-25
UniRef50_Q9ZVE0 Cluster: Oligoribonuclease; n=8; Magnoliophyta|R... 111 2e-23
UniRef50_UPI00015B53D6 Cluster: PREDICTED: similar to ENSANGP000... 107 3e-22
UniRef50_A0E2M4 Cluster: Chromosome undetermined scaffold_75, wh... 103 6e-21
UniRef50_P54964 Cluster: Oligoribonuclease, mitochondrial precur... 99 6e-20
UniRef50_O94626 Cluster: Probable oligoribonuclease; n=5; Ascomy... 100 8e-20
UniRef50_Q5KPH7 Cluster: Oligoribonuclease, putative; n=2; Filob... 97 3e-19
UniRef50_Q4P645 Cluster: Putative uncharacterized protein; n=2; ... 97 3e-19
UniRef50_Q22ZB0 Cluster: Exonuclease family protein; n=1; Tetrah... 97 4e-19
UniRef50_Q8FMX9 Cluster: Oligoribonuclease; n=6; Actinomycetales... 96 7e-19
UniRef50_Q62M61 Cluster: Oligoribonuclease; n=90; Bacteria|Rep: ... 96 9e-19
UniRef50_Q6BKE6 Cluster: Similar to CA4537|CaYNT2 Candida albica... 95 1e-18
UniRef50_Q5Z0A9 Cluster: Oligoribonuclease; n=36; Actinobacteria... 94 3e-18
UniRef50_Q8B5Y0 Cluster: Putative oligoribonuclease; n=1; Diacha... 94 4e-18
UniRef50_A5E684 Cluster: Oligoribonuclease, mitochondrial; n=1; ... 90 6e-17
UniRef50_Q8ZIW9 Cluster: Oligoribonuclease; n=182; Bacteria|Rep:... 90 6e-17
UniRef50_A0BKH9 Cluster: Chromosome undetermined scaffold_112, w... 89 1e-16
UniRef50_A4QVJ0 Cluster: Putative uncharacterized protein; n=2; ... 88 2e-16
UniRef50_A5KRR8 Cluster: Oligoribonuclease; n=1; candidate divis... 87 6e-16
UniRef50_UPI00005A0A92 Cluster: PREDICTED: similar to small frag... 80 7e-14
UniRef50_Q8G3N5 Cluster: Oligoribonuclease; n=4; Bifidobacterium... 80 7e-14
UniRef50_Q056X5 Cluster: Oligoribonuclease; n=1; Buchnera aphidi... 77 6e-13
UniRef50_A7BDJ9 Cluster: Putative uncharacterized protein; n=1; ... 76 1e-12
UniRef50_Q6MNB4 Cluster: Oligoribonuclease; n=1; Bdellovibrio ba... 70 5e-11
UniRef50_A2XRP8 Cluster: Putative uncharacterized protein; n=2; ... 50 1e-10
UniRef50_Q83GA7 Cluster: Oligoribonuclease; n=5; Actinomycetales... 69 2e-10
UniRef50_A6DMP4 Cluster: Oligoribonuclease; n=1; Lentisphaera ar... 67 4e-10
UniRef50_Q097T4 Cluster: Oligoribonuclease; n=2; Cystobacterinea... 62 1e-08
UniRef50_Q6XM84 Cluster: FirrV-1-A3; n=1; Feldmannia irregularis... 60 7e-08
UniRef50_Q2HAN9 Cluster: Putative uncharacterized protein; n=1; ... 55 2e-06
UniRef50_Q8QNE0 Cluster: EsV-1-139; n=1; Ectocarpus siliculosus ... 51 3e-05
UniRef50_A3D8L9 Cluster: Exonuclease, RNase T and DNA polymerase... 47 6e-04
UniRef50_Q5KRE9 Cluster: Probable oligoribonuclease; n=2; Coryne... 38 0.34
UniRef50_Q7NC15 Cluster: PolC; n=1; Mycoplasma gallisepticum|Rep... 36 1.4
UniRef50_Q8A811 Cluster: DNA Pol III Epsilon Chain; n=21; cellul... 35 1.8
UniRef50_A6Q2C7 Cluster: DNA polymerase III, epsilon subunit; n=... 35 1.8
UniRef50_A2BVT4 Cluster: Possible DNA polymerase III, epsilon su... 35 2.4
UniRef50_Q8WW27 Cluster: Putative C->U-editing enzyme APOBEC-4; ... 35 2.4
UniRef50_A7DSI3 Cluster: Putative uncharacterized protein; n=1; ... 34 3.2
UniRef50_A6DIP6 Cluster: Exonuclease; n=1; Lentisphaera araneosa... 33 5.6
UniRef50_P42976 Cluster: Dihydrodipicolinate reductase; n=31; Ba... 33 5.6
UniRef50_A7EJY6 Cluster: Putative uncharacterized protein; n=2; ... 33 7.4
UniRef50_Q2AKQ0 Cluster: Exonuclease; n=1; Bacillus weihenstepha... 33 9.8
UniRef50_Q5CUZ3 Cluster: Putative uncharacterized protein; n=2; ... 33 9.8
UniRef50_Q0CUJ2 Cluster: Putative uncharacterized protein; n=2; ... 33 9.8
>UniRef50_Q16XI3 Cluster: Oligoribonuclease, mitochondrial; n=2;
Aedes aegypti|Rep: Oligoribonuclease, mitochondrial -
Aedes aegypti (Yellowfever mosquito)
Length = 210
Score = 140 bits (338), Expect = 4e-32
Identities = 59/107 (55%), Positives = 80/107 (74%)
Frame = +1
Query: 421 IVWMDLEMTGLDIENDHIMEIACLVTDAQLNVVATGPDIVINLPEVTLNKMNNWCKVQHG 600
+VW+DLEMTGL++E D I+EIAC++T+ L ++ GPDIVI+ PE LN MN WC+ H
Sbjct: 36 LVWIDLEMTGLEVEKDRILEIACVITNKNLEILERGPDIVIHEPEEVLNAMNEWCQTNHS 95
Query: 601 ETGLTEACLKSDTSLAEAERIILKFVSNHVPEKICPLAGNSIYMDRM 741
+TGL +A +S L +AE+++L FV + PEK CPLAGN+IYMDRM
Sbjct: 96 KTGLIQAVRESKIDLQKAEQMVLDFVKKYCPEKACPLAGNTIYMDRM 142
>UniRef50_Q9Y3B8 Cluster: Oligoribonuclease, mitochondrial
precursor; n=37; cellular organisms|Rep:
Oligoribonuclease, mitochondrial precursor - Homo
sapiens (Human)
Length = 237
Score = 135 bits (326), Expect = 1e-30
Identities = 57/110 (51%), Positives = 83/110 (75%)
Frame = +1
Query: 409 IAQRIVWMDLEMTGLDIENDHIMEIACLVTDAQLNVVATGPDIVINLPEVTLNKMNNWCK 588
+AQR+VW+DLEMTGLDIE D I+E+ACL+TD+ LN++A GP+++I P+ L+ M++WCK
Sbjct: 39 MAQRMVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCK 98
Query: 589 VQHGETGLTEACLKSDTSLAEAERIILKFVSNHVPEKICPLAGNSIYMDR 738
HG++GLT+A +S +L +AE L FV P +CPLAGNS++ D+
Sbjct: 99 EHHGKSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHEDK 148
>UniRef50_Q9VCI0 Cluster: Probable oligoribonuclease; n=2;
Sophophora|Rep: Probable oligoribonuclease - Drosophila
melanogaster (Fruit fly)
Length = 211
Score = 130 bits (315), Expect = 3e-29
Identities = 53/107 (49%), Positives = 73/107 (68%)
Frame = +1
Query: 421 IVWMDLEMTGLDIENDHIMEIACLVTDAQLNVVATGPDIVINLPEVTLNKMNNWCKVQHG 600
IVWMDLEMTGLDIE D I+E+AC++TD LNV + GP IN P+ + MN WC H
Sbjct: 38 IVWMDLEMTGLDIEKDKILEVACIITDQDLNVKSEGPCFAINHPQEVYDSMNEWCMKHHY 97
Query: 601 ETGLTEACLKSDTSLAEAERIILKFVSNHVPEKICPLAGNSIYMDRM 741
+GL + C SD +L EA ++L ++ ++P++ CPL GNS+Y DR+
Sbjct: 98 NSGLIDRCKSSDVNLEEASNLVLSYLEKNIPKRACPLGGNSVYTDRL 144
>UniRef50_Q4SLB2 Cluster: Chromosome 7 SCAF14557, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 7 SCAF14557, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 248
Score = 128 bits (310), Expect = 1e-28
Identities = 55/106 (51%), Positives = 77/106 (72%)
Frame = +1
Query: 409 IAQRIVWMDLEMTGLDIENDHIMEIACLVTDAQLNVVATGPDIVINLPEVTLNKMNNWCK 588
++QR+VW+DLEMTGLDIE D I+E+ACL+TD+ LN++A GP+++IN P+ L+ M+ WCK
Sbjct: 2 MSQRMVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIINQPDELLDGMSEWCK 61
Query: 589 VQHGETGLTEACLKSDTSLAEAERIILKFVSNHVPEKICPLAGNSI 726
HG++GLT+A S +L +AE L FV H P CPLAG +
Sbjct: 62 EHHGKSGLTQAVRNSKITLEQAEYEFLSFVRQHTPPGQCPLAGGQL 107
>UniRef50_UPI00015B5C15 Cluster: PREDICTED: similar to
ENSANGP00000010833; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000010833 - Nasonia
vitripennis
Length = 224
Score = 117 bits (281), Expect = 4e-25
Identities = 49/107 (45%), Positives = 76/107 (71%)
Frame = +1
Query: 421 IVWMDLEMTGLDIENDHIMEIACLVTDAQLNVVATGPDIVINLPEVTLNKMNNWCKVQHG 600
IVW+D+EM+GLD++ + I+EIACL+TD LNV++ V+ P+ L+ MN+WC+ HG
Sbjct: 46 IVWIDMEMSGLDVDKNRILEIACLITDENLNVISDEFQAVLYQPDTELDTMNDWCQNNHG 105
Query: 601 ETGLTEACLKSDTSLAEAERIILKFVSNHVPEKICPLAGNSIYMDRM 741
+TGL +AC KS + + +L F+ ++P+ CPLAGNS+Y+DR+
Sbjct: 106 KTGLIDACKKSAETEDAVDINLLYFMMKYIPKGKCPLAGNSVYVDRL 152
>UniRef50_Q17819 Cluster: Probable oligoribonuclease; n=2;
Caenorhabditis|Rep: Probable oligoribonuclease -
Caenorhabditis elegans
Length = 193
Score = 116 bits (279), Expect = 6e-25
Identities = 54/111 (48%), Positives = 74/111 (66%)
Frame = +1
Query: 409 IAQRIVWMDLEMTGLDIENDHIMEIACLVTDAQLNVVATGPDIVINLPEVTLNKMNNWCK 588
I QRI+W+D EMTGLD+E + EIA +VTD++LN +ATGPDIVI+ P+ L+ M W +
Sbjct: 11 IEQRIIWIDCEMTGLDVEKQTLCEIALIVTDSELNTIATGPDIVIHQPKEVLDNMEEWPR 70
Query: 589 VQHGETGLTEACLKSDTSLAEAERIILKFVSNHVPEKICPLAGNSIYMDRM 741
E GL E + S S+A+AE ++ F+ H P+AGNSIYMDR+
Sbjct: 71 NTFHENGLMEKIIASKYSMADAENEVIDFLKLHALPGKSPIAGNSIYMDRL 121
>UniRef50_UPI0000DB7BA5 Cluster: PREDICTED: similar to Probable
oligoribonuclease; n=1; Apis mellifera|Rep: PREDICTED:
similar to Probable oligoribonuclease - Apis mellifera
Length = 212
Score = 116 bits (278), Expect = 8e-25
Identities = 52/116 (44%), Positives = 76/116 (65%)
Frame = +1
Query: 394 NTKVDIAQRIVWMDLEMTGLDIENDHIMEIACLVTDAQLNVVATGPDIVINLPEVTLNKM 573
+T V IVW+D+EM+GLDI I+EIAC++TD L V+ +IVI+ + LN M
Sbjct: 22 STNVQKNDYIVWLDMEMSGLDINTSQILEIACVITDKNLKTVSKDLNIVIHQSDEILNNM 81
Query: 574 NNWCKVQHGETGLTEACLKSDTSLAEAERIILKFVSNHVPEKICPLAGNSIYMDRM 741
N+WC H +TGL S ++ +AE+I+LK++ +V E CPLAG+S+Y+DRM
Sbjct: 82 NDWCLATHQKTGLIHESRLSKITIQDAEQILLKYLKTYVKEATCPLAGSSVYIDRM 137
>UniRef50_Q9ZVE0 Cluster: Oligoribonuclease; n=8; Magnoliophyta|Rep:
Oligoribonuclease - Arabidopsis thaliana (Mouse-ear
cress)
Length = 222
Score = 111 bits (266), Expect = 2e-23
Identities = 50/110 (45%), Positives = 74/110 (67%)
Frame = +1
Query: 406 DIAQRIVWMDLEMTGLDIENDHIMEIACLVTDAQLNVVATGPDIVINLPEVTLNKMNNWC 585
D Q +VW+DLEMTGL++E D I+EIAC++T+ L GPD+V+ + L+KM++WC
Sbjct: 41 DYKQPLVWIDLEMTGLNVEVDRILEIACIITNGDLTQSVEGPDLVVRQTKDCLDKMDDWC 100
Query: 586 KVQHGETGLTEACLKSDTSLAEAERIILKFVSNHVPEKICPLAGNSIYMD 735
+ HG +GLT+ L S + EAE+ +++FV HV LAGNS+Y+D
Sbjct: 101 QTHHGASGLTKKVLLSAITEREAEQKVIEFVKKHVGSGNPLLAGNSVYVD 150
>UniRef50_UPI00015B53D6 Cluster: PREDICTED: similar to
ENSANGP00000010833; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000010833 - Nasonia
vitripennis
Length = 185
Score = 107 bits (257), Expect = 3e-22
Identities = 50/115 (43%), Positives = 73/115 (63%)
Frame = +1
Query: 394 NTKVDIAQRIVWMDLEMTGLDIENDHIMEIACLVTDAQLNVVATGPDIVINLPEVTLNKM 573
++ V A RI+W+DLEMTGL++ D I+E+A ++TD QLN+V+ +VI+ E M
Sbjct: 3 SSAVQKADRIIWIDLEMTGLNVMQDKILEVASIITDDQLNIVSDEFQMVIHQSEDVFETM 62
Query: 574 NNWCKVQHGETGLTEACLKSDTSLAEAERIILKFVSNHVPEKICPLAGNSIYMDR 738
WC+ QH +TGL EA S + AE +++F +VP CPLAG+ +YMDR
Sbjct: 63 IPWCQEQHNKTGLIEASRNSIFNEEMAEEELIRFFRKYVPHNTCPLAGSCLYMDR 117
>UniRef50_A0E2M4 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=3; Eukaryota|Rep: Chromosome
undetermined scaffold_75, whole genome shotgun sequence
- Paramecium tetraurelia
Length = 176
Score = 103 bits (246), Expect = 6e-21
Identities = 47/103 (45%), Positives = 69/103 (66%), Gaps = 1/103 (0%)
Frame = +1
Query: 436 LEMTGLDIENDHIMEIACLVTDAQLNVVATGPDIVINLPEVTLNKMNNWCKVQHGETGLT 615
+EMTGL++ D I+EIAC++TD +L + GP +VI+ L M+ WC H +GL
Sbjct: 1 MEMTGLNVFQDQILEIACVLTDFKLETIIKGPHLVIHADNQVLEGMDQWCTKTHKASGLY 60
Query: 616 EACLKSDTSLAEAERIILKFVS-NHVPEKICPLAGNSIYMDRM 741
E LKS ++ +AE IL F++ N++P K+ PLAGNS+YMDR+
Sbjct: 61 EESLKSTLNVQQAEEQILNFLNQNNIPPKVLPLAGNSVYMDRL 103
>UniRef50_P54964 Cluster: Oligoribonuclease, mitochondrial
precursor; n=4; Saccharomycetaceae|Rep:
Oligoribonuclease, mitochondrial precursor -
Saccharomyces cerevisiae (Baker's yeast)
Length = 269
Score = 99 bits (238), Expect = 6e-20
Identities = 56/150 (37%), Positives = 84/150 (56%), Gaps = 9/150 (6%)
Frame = +1
Query: 319 STLSRSAITFLT-RNLSMSPKIMMKKNTKVDIAQRIVWMDLEMTGLDIENDHIMEIACLV 495
S RS +L R + + K + + +VW+D EMTGLD ND I+EI C++
Sbjct: 20 SLYRRSVSQYLRPRTIQNLQSMAQTPELKTKLFKPLVWIDCEMTGLDHVNDRIIEICCII 79
Query: 496 TDAQLNVV--ATGP-----DIVINLPEVTLNKMNNWCKVQHGETGLTEACLKSDTSLAEA 654
TD L V A G + VI+ +NKMN WC HG +GLT L S+ +LA+
Sbjct: 80 TDGHLAPVKAADGQGDSHYESVIHYGPEVMNKMNEWCIEHHGNSGLTAKVLASEKTLAQV 139
Query: 655 ERIILKFVSNHVPEK-ICPLAGNSIYMDRM 741
E +L+++ ++P+K + LAGNS++MDR+
Sbjct: 140 EDELLEYIQRYIPDKNVGVLAGNSVHMDRL 169
>UniRef50_O94626 Cluster: Probable oligoribonuclease; n=5;
Ascomycota|Rep: Probable oligoribonuclease -
Schizosaccharomyces pombe (Fission yeast)
Length = 180
Score = 99.5 bits (237), Expect = 8e-20
Identities = 44/111 (39%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
Frame = +1
Query: 406 DIAQRIVWMDLEMTGLDIENDHIMEIACLVTDAQLNVVATGPDIVINLPEVTLNKMNNWC 585
++ Q +VW+D EMTGL++ +ME+A ++TD L V D VI L E L++MN+WC
Sbjct: 3 NLKQPLVWIDCEMTGLEVGKHVLMEVAAIITDGNLRPVEEKFDAVIKLDEKQLSEMNDWC 62
Query: 586 KVQHGETGLTEACLKSDTSLAEAERIILKFVSNHVPEK-ICPLAGNSIYMD 735
QHG++GLTE C +S+ ++ + E +L ++ ++P+K +AGNS++ D
Sbjct: 63 IEQHGKSGLTERCRQSNLTVKDVENQLLAYIKKYIPKKREALIAGNSVHAD 113
>UniRef50_Q5KPH7 Cluster: Oligoribonuclease, putative; n=2;
Filobasidiella neoformans|Rep: Oligoribonuclease,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 184
Score = 97.5 bits (232), Expect = 3e-19
Identities = 45/106 (42%), Positives = 67/106 (63%), Gaps = 1/106 (0%)
Frame = +1
Query: 421 IVWMDLEMTGLDIENDHIMEIACLVTDAQLNVVATGPDIVINLPEVTLNKMNNWCKVQHG 600
+VW+D EMTGLD ND I+EIA ++TD +LN V G +I P+ L+ M +WC+ QHG
Sbjct: 13 LVWVDCEMTGLDFLNDRIIEIAVIITDGRLNPVDGGISYIIKTPKEVLDNMGDWCREQHG 72
Query: 601 ETGLTEACLKSDTSLAEAERIILKFVSNHVPEKICP-LAGNSIYMD 735
++GL +ACL S S +L ++ +PE+ LAG+S++ D
Sbjct: 73 KSGLIQACLDSPYSYDTVVEKVLDYIRRWIPERGAGLLAGSSVHAD 118
>UniRef50_Q4P645 Cluster: Putative uncharacterized protein; n=2;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 606
Score = 97.5 bits (232), Expect = 3e-19
Identities = 47/110 (42%), Positives = 70/110 (63%), Gaps = 4/110 (3%)
Frame = +1
Query: 421 IVWMDLEMTGLDIEN-DHIMEIACLVTDAQLNVVATGPDIVINLPEVTLNKMNNWCKVQH 597
+VW+D EMTGL +EN D ++EIAC++TD QLN + +G VI+ P+ L+ MN+WC QH
Sbjct: 423 LVWIDCEMTGLSVENGDRLLEIACIITDGQLNPIDSGVSYVISTPQSVLDGMNHWCVNQH 482
Query: 598 GETGLTEACLKSDTSL--AEAERIILKFVSNHVP-EKICPLAGNSIYMDR 738
+GLT CL ++ S A IL +V + +P LAGN+++ D+
Sbjct: 483 ALSGLTAECLDANRSYPHASVRTAILAYVRDRIPTPNTACLAGNTVHADK 532
>UniRef50_Q22ZB0 Cluster: Exonuclease family protein; n=1;
Tetrahymena thermophila SB210|Rep: Exonuclease family
protein - Tetrahymena thermophila SB210
Length = 190
Score = 97.1 bits (231), Expect = 4e-19
Identities = 48/120 (40%), Positives = 73/120 (60%), Gaps = 2/120 (1%)
Frame = +1
Query: 382 MMKKNTKVDIAQRIVWMDLEMTGLD-IENDHIMEIACLVTDAQLNVVATGPDIVINLPEV 558
M + K+ + ++W D EMTGL+ + ND I+EIA L+TD +L V GP+++I P+
Sbjct: 1 MDSQEQKIKLKDPLLWCDCEMTGLNFLNNDQIIEIATLLTDGELTQVIKGPELIIQAPKE 60
Query: 559 TLNKMNNWCKVQHGETGLTEACLKSDTSLAEAERIILKFV-SNHVPEKICPLAGNSIYMD 735
L M+ WC H +GL + LKS+ +L AE ++KF+ N + +K LAGNSI+ D
Sbjct: 61 LLESMDEWCTNTHKGSGLYDKVLKSEVTLQMAEEQVIKFLKDNGIEQKEALLAGNSIHAD 120
>UniRef50_Q8FMX9 Cluster: Oligoribonuclease; n=6;
Actinomycetales|Rep: Oligoribonuclease - Corynebacterium
efficiens
Length = 221
Score = 96.3 bits (229), Expect = 7e-19
Identities = 48/108 (44%), Positives = 67/108 (62%), Gaps = 1/108 (0%)
Frame = +1
Query: 418 RIVWMDLEMTGLDIENDHIMEIACLVTDAQLNVVATGPDIVINLPEVTLNKMNNWCKVQH 597
R+VW+DLEMTGLD+E I+E+A LVTDA LN++ G D+V++ + L +M+++ H
Sbjct: 20 RLVWVDLEMTGLDLERHVIVEVAALVTDANLNILGEGVDLVVHATDEELARMDDFVTRMH 79
Query: 598 GETGLTEACLKSDTSLAEAERIILKFVSNHV-PEKICPLAGNSIYMDR 738
+GLT S SL +AE +L + H P PLAGNSI DR
Sbjct: 80 DSSGLTPLIRASTVSLKDAEDAVLALIEEHCDPAHPAPLAGNSIATDR 127
>UniRef50_Q62M61 Cluster: Oligoribonuclease; n=90; Bacteria|Rep:
Oligoribonuclease - Burkholderia mallei (Pseudomonas
mallei)
Length = 201
Score = 95.9 bits (228), Expect = 9e-19
Identities = 45/106 (42%), Positives = 67/106 (63%)
Frame = +1
Query: 421 IVWMDLEMTGLDIENDHIMEIACLVTDAQLNVVATGPDIVINLPEVTLNKMNNWCKVQHG 600
+VW+D+EMTGLD + D I+EIA +VT++ L++ GP + I+ + TL KM++W K HG
Sbjct: 20 LVWLDMEMTGLDPDTDRIIEIAVVVTNSTLDIAVEGPVLAIHQSDETLAKMDDWNKNTHG 79
Query: 601 ETGLTEACLKSDTSLAEAERIILKFVSNHVPEKICPLAGNSIYMDR 738
+GL + S + A+A I F++ HVP P+ GNSI DR
Sbjct: 80 RSGLIDRVRASSVTEADAAAQIAAFLAEHVPPGKSPMCGNSICQDR 125
>UniRef50_Q6BKE6 Cluster: Similar to CA4537|CaYNT2 Candida albicans
CaYNT2 suppressor of rna12/yme2; n=3;
Saccharomycetales|Rep: Similar to CA4537|CaYNT2 Candida
albicans CaYNT2 suppressor of rna12/yme2 - Debaryomyces
hansenii (Yeast) (Torulaspora hansenii)
Length = 278
Score = 95.5 bits (227), Expect = 1e-18
Identities = 54/154 (35%), Positives = 89/154 (57%), Gaps = 8/154 (5%)
Frame = +1
Query: 301 TYNMIKSTLSRSAITFLTRNLSMSPKIMMKK------NTKVDIAQRIVWMDLEMTGLDIE 462
T + + ST + T +N MSPK ++ N+K I + +VW+D EMTGL++
Sbjct: 28 TTSNVTSTTTVETDTKQLKN-DMSPKADLQSMIRNIINSKKPIWKPLVWIDCEMTGLNVF 86
Query: 463 NDHIMEIACLVTDAQLNVV-ATGPDIVINLPEVTLNKMNNWCKVQHGETGLTEACLKS-D 636
DHI+EI C++TD L ++ G + + P+ L+ MN WC QHG++GLT L++
Sbjct: 87 QDHIIEICCIITDGNLEIIDEKGFESTVYQPKEVLDGMNEWCVNQHGKSGLTAKILENPQ 146
Query: 637 TSLAEAERIILKFVSNHVPEKICPLAGNSIYMDR 738
L++ E +L+++ +V +AGNSI+MD+
Sbjct: 147 CELSKIEDELLEYIKQYVQPNKGIMAGNSIHMDK 180
>UniRef50_Q5Z0A9 Cluster: Oligoribonuclease; n=36; Actinobacteria
(class)|Rep: Oligoribonuclease - Nocardia farcinica
Length = 216
Score = 94.3 bits (224), Expect = 3e-18
Identities = 45/107 (42%), Positives = 69/107 (64%), Gaps = 1/107 (0%)
Frame = +1
Query: 421 IVWMDLEMTGLDIENDHIMEIACLVTDAQLNVVATGPDIVINLPEVTLNKMNNWCKVQHG 600
+VWMD EMTGL +++D ++E++ LVTD+ LN++ G DIVI+ + L M H
Sbjct: 6 VVWMDCEMTGLRLDSDKLIEVSALVTDSDLNILGDGVDIVIHADDAALAAMPPVVAEMHA 65
Query: 601 ETGLTEACLKSDTSLAEAERIILKFVSNHVP-EKICPLAGNSIYMDR 738
+GLT+ +S ++AEAE+ +L ++ +VP + PLAGNSI DR
Sbjct: 66 RSGLTDEVRRSTVTVAEAEQQVLDYIRQYVPTPRTVPLAGNSIATDR 112
>UniRef50_Q8B5Y0 Cluster: Putative oligoribonuclease; n=1;
Diachasmimorpha longicaudata entomopoxvirus|Rep:
Putative oligoribonuclease - Diachasmimorpha
longicaudata entomopoxvirus
Length = 206
Score = 93.9 bits (223), Expect = 4e-18
Identities = 50/133 (37%), Positives = 75/133 (56%), Gaps = 4/133 (3%)
Frame = +1
Query: 352 TRNLSMSPKIMMKKNTKV---DIAQRIVWMDLEMTGLDIENDHIMEIACLVTDAQLNVVA 522
+R S I + K T + +A I W+DLEMTGLD E D+I+EI C +T+ L + +
Sbjct: 5 SRKCSSCVSIFILKKTFIFLKTMANNIAWLDLEMTGLDPETDNILEIGCFITNDALEITS 64
Query: 523 TGPDIVINLPEVTLNKMNNWCKVQHGETGLTEACLKSDTSLAEAERIILKFVSNHV-PEK 699
++I+ + L M+ WCK H + GL + S TSL AE+ +++F H +K
Sbjct: 65 PIFHMIIHNSDDILKSMDKWCKKTHTKNGLITEVMNSKTSLEVAEKKLIQFFKAHASSDK 124
Query: 700 ICPLAGNSIYMDR 738
LAGNSIY+D+
Sbjct: 125 AIILAGNSIYIDK 137
>UniRef50_A5E684 Cluster: Oligoribonuclease, mitochondrial; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep:
Oligoribonuclease, mitochondrial - Lodderomyces
elongisporus (Yeast) (Saccharomyces elongisporus)
Length = 269
Score = 89.8 bits (213), Expect = 6e-17
Identities = 45/111 (40%), Positives = 71/111 (63%), Gaps = 5/111 (4%)
Frame = +1
Query: 421 IVWMDLEMTGLDI-ENDHIMEIACLVTDAQLNVVATGP--DIVINLPEVTLNKMNNWCKV 591
+VW+D EMTGLD+ D I+EI C+VTD L V+ G + I P+ TL+KM+ WC+
Sbjct: 77 LVWVDCEMTGLDVLGEDRIIEICCIVTDENLEVLGNGDYYESTIYYPQETLDKMDEWCQT 136
Query: 592 QHGETGLTEACLKS-DTSLAEAERIILKFVSNHVP-EKICPLAGNSIYMDR 738
HG+ GL + L + D +L + + +L+F+ ++ KI +AGNS++MD+
Sbjct: 137 THGQLGLIQRILDNPDRTLEKVQAELLEFLKKYISGPKIGIMAGNSVHMDK 187
>UniRef50_Q8ZIW9 Cluster: Oligoribonuclease; n=182; Bacteria|Rep:
Oligoribonuclease - Yersinia pestis
Length = 181
Score = 89.8 bits (213), Expect = 6e-17
Identities = 44/106 (41%), Positives = 63/106 (59%)
Frame = +1
Query: 421 IVWMDLEMTGLDIENDHIMEIACLVTDAQLNVVATGPDIVINLPEVTLNKMNNWCKVQHG 600
++W+DLEMTGLD E D I+EIA LVTDA LN++A GP + ++ L M+ W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPVLAVHQSAEQLGLMDEWNVRTHT 67
Query: 601 ETGLTEACLKSDTSLAEAERIILKFVSNHVPEKICPLAGNSIYMDR 738
+GL E S + +AE ++F+ VP + P+ GNS+ DR
Sbjct: 68 GSGLVERVKASPFNDRDAELQTIEFLKQWVPAGVSPICGNSVGQDR 113
>UniRef50_A0BKH9 Cluster: Chromosome undetermined scaffold_112,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_112,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 174
Score = 88.6 bits (210), Expect = 1e-16
Identities = 38/94 (40%), Positives = 62/94 (65%), Gaps = 1/94 (1%)
Frame = +1
Query: 463 NDHIMEIACLVTDAQLNVVATGPDIVINLPEVTLNKMNNWCKVQHGETGLTEACLKSDTS 642
ND + + AC++TD +L + GP IVI+ + L+ M+ WC H +GL + L S +
Sbjct: 10 NDRVEQCACILTDYKLKTIIKGPHIVIHADKQVLDGMDEWCTTTHKASGLYQESLNSTVT 69
Query: 643 LAEAERIILKFVS-NHVPEKICPLAGNSIYMDRM 741
+ +A+ IL+F++ N++P K+ PLAGNS+YMDR+
Sbjct: 70 VGQAQEQILQFLNQNNIPPKVLPLAGNSVYMDRL 103
>UniRef50_A4QVJ0 Cluster: Putative uncharacterized protein; n=2;
Sordariomycetes|Rep: Putative uncharacterized protein -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 223
Score = 88.2 bits (209), Expect = 2e-16
Identities = 44/108 (40%), Positives = 68/108 (62%), Gaps = 2/108 (1%)
Frame = +1
Query: 421 IVWMDLEMTGLDIENDHIMEIACLVTDAQLNVV-ATGPDIVINLPEVTLNKMNNWCKVQH 597
+VW+D EMTGL+ +++ I+EI CLVTD LN+ G V++ + ++KM+ WC QH
Sbjct: 8 LVWIDCEMTGLNPDSEEIIEIFCLVTDGDLNLKDEEGWGTVVHQTQERMDKMDEWCTKQH 67
Query: 598 GETGLTEACLKSDTSLAEAERIILKFVSNHVPEK-ICPLAGNSIYMDR 738
G +GLT + S T+ EA +L ++ HVP + LAG+S++ DR
Sbjct: 68 GGSGLTARVVGSTTTPEEAADGLLAYIKKHVPHAGVALLAGSSVHHDR 115
>UniRef50_A5KRR8 Cluster: Oligoribonuclease; n=1; candidate division
TM7 genomosp. GTL1|Rep: Oligoribonuclease - candidate
division TM7 genomosp. GTL1
Length = 184
Score = 86.6 bits (205), Expect = 6e-16
Identities = 50/125 (40%), Positives = 74/125 (59%), Gaps = 1/125 (0%)
Frame = +1
Query: 367 MSPKIMMKKNTKVDIAQRIVWMDLEMTGLDIENDHIMEIACLVTDAQLNVVATGPDIVIN 546
M+ K MKK+ K ++W+DLEMTGLD + D ++E+A + TD +A +V
Sbjct: 1 MTHKADMKKHAK------LLWLDLEMTGLDPQRDRVLEVAAIATDWNFEEMAVIESVVHQ 54
Query: 547 LPEVTLNKMNNWCKVQHGETGLTEACLKSDTSLAEAERIILKFV-SNHVPEKICPLAGNS 723
P+V L+ M++W + QH +GLTE SD S +AE I+L+F+ S + LAGNS
Sbjct: 55 SPKV-LDLMDDWVRSQHASSGLTERVRASDVSETDAEDILLQFIDSVYKDGDPVVLAGNS 113
Query: 724 IYMDR 738
I+ DR
Sbjct: 114 IHQDR 118
>UniRef50_UPI00005A0A92 Cluster: PREDICTED: similar to small
fragment nuclease (predicted); n=1; Canis lupus
familiaris|Rep: PREDICTED: similar to small fragment
nuclease (predicted) - Canis familiaris
Length = 161
Score = 79.8 bits (188), Expect = 7e-14
Identities = 31/60 (51%), Positives = 47/60 (78%)
Frame = +1
Query: 433 DLEMTGLDIENDHIMEIACLVTDAQLNVVATGPDIVINLPEVTLNKMNNWCKVQHGETGL 612
+L+MTGLDIE D I+E+ACL+TD+ LN++A GP+++I P+ L+ M++WCK HG+ L
Sbjct: 70 ELQMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHGKVTL 129
>UniRef50_Q8G3N5 Cluster: Oligoribonuclease; n=4;
Bifidobacterium|Rep: Oligoribonuclease - Bifidobacterium
longum
Length = 216
Score = 79.8 bits (188), Expect = 7e-14
Identities = 44/109 (40%), Positives = 67/109 (61%), Gaps = 2/109 (1%)
Frame = +1
Query: 418 RIVWMDLEMTGLDI-ENDHIMEIACLVTDAQLNVVATGPDIVINLPEVTLNKMNNWCKVQ 594
R++W+D EMTGLDI D ++E++ + TD LNV+ G D VI E +N MN++ +
Sbjct: 16 RLIWIDCEMTGLDIFGGDELVEVSVVPTDFDLNVLDEGVDYVIKPSEKAVNHMNDFVRQM 75
Query: 595 HGETGLTEACLKSDTSLAEAERIILKFVSNHVPEKICP-LAGNSIYMDR 738
H +GL ++ SLAEAE+ + ++V PE + P LAGN+I D+
Sbjct: 76 HTRSGLINE-WENGLSLAEAEQKVTEYVLRFTPEGVRPLLAGNTIGSDK 123
>UniRef50_Q056X5 Cluster: Oligoribonuclease; n=1; Buchnera
aphidicola str. Cc (Cinara cedri)|Rep: Oligoribonuclease
- Buchnera aphidicola subsp. Cinara cedri
Length = 181
Score = 76.6 bits (180), Expect = 6e-13
Identities = 38/109 (34%), Positives = 67/109 (61%), Gaps = 1/109 (0%)
Frame = +1
Query: 415 QRIVWMDLEMTGLDIENDHIMEIACLVTDAQLNVVATGPDIVINLPEVTLNKM-NNWCKV 591
+ ++W+DLE TGL+ + I+EI+ ++TD LN++ GP+I+I + L K+ +N+ ++
Sbjct: 6 ENLIWVDLETTGLNPKIHKIIEISTIITDKNLNILEIGPNIIIFQKKEFLRKICHNFFQI 65
Query: 592 QHGETGLTEACLKSDTSLAEAERIILKFVSNHVPEKICPLAGNSIYMDR 738
H + GL + S AE+ LKF+ +P+ I P+ GN+I +DR
Sbjct: 66 -HKKNGLMKEIKNSKEDEKSAEKKTLKFLKKWIPKNISPICGNTISLDR 113
>UniRef50_A7BDJ9 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 198
Score = 75.8 bits (178), Expect = 1e-12
Identities = 37/101 (36%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Frame = +1
Query: 442 MTGLDIENDHIMEIACLVTDAQLNVVATGPDIVINLPEVTLNKMNNWCKVQHGETGLTEA 621
MTGLD++ D ++E+A +VTD L +V G D++I P L+ MN++ + H +GL +
Sbjct: 1 MTGLDVQRDALIEVAVVVTDGDLTIVDPGMDVLITPPAEALDNMNDFVRNMHTSSGLLDD 60
Query: 622 CLKSDTSLAEAERIILKFVSNHVPEK-ICPLAGNSIYMDRM 741
S S+ EA +L ++ VP++ LAGNS+ D+M
Sbjct: 61 LQTSGVSMEEATEQVLSYIKRFVPQQGKALLAGNSVGTDKM 101
>UniRef50_Q6MNB4 Cluster: Oligoribonuclease; n=1; Bdellovibrio
bacteriovorus|Rep: Oligoribonuclease - Bdellovibrio
bacteriovorus
Length = 175
Score = 70.1 bits (164), Expect = 5e-11
Identities = 40/110 (36%), Positives = 64/110 (58%), Gaps = 2/110 (1%)
Frame = +1
Query: 418 RIVWMDLEMTGLDIENDHIMEIACLVTDAQLNVVATGPDIVINLPEVTLNKMNNWCKVQH 597
++ W+D+EMTGLD+E + I+E+A +VTD + T + V+ P+ L+ M+ W H
Sbjct: 3 KLFWIDMEMTGLDVEKEVIIEVAAIVTDLNFKELETF-ETVVKQPQKYLDSMDAWNTEHH 61
Query: 598 GETGLTEACLKSDTSLAEAERIILKFVSNHVPE-KICP-LAGNSIYMDRM 741
++GLT A + + + E ++ V H P+ K P LAGNSI DR+
Sbjct: 62 KKSGLT-AKVPNGMDPDQVEAKLVDMVKKHFPDPKDKPVLAGNSIMQDRL 110
>UniRef50_A2XRP8 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 214
Score = 50.0 bits (114), Expect(2) = 1e-10
Identities = 20/32 (62%), Positives = 26/32 (81%)
Frame = +1
Query: 406 DIAQRIVWMDLEMTGLDIENDHIMEIACLVTD 501
D + +VW+DLEMTGLDI D I+EIAC++TD
Sbjct: 66 DYDKPLVWIDLEMTGLDITKDRILEIACIITD 97
Score = 39.1 bits (87), Expect(2) = 1e-10
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +1
Query: 607 GLTEACLKSDTSLAEAERIILKFVSNHVPEKICPLAGNSIYMD 735
GL E L+SD S +AE+ +L F+ ++ +AGNS+YMD
Sbjct: 98 GLKEKVLQSDISENDAEKQVLDFIRKYIGSATPLIAGNSVYMD 140
>UniRef50_Q83GA7 Cluster: Oligoribonuclease; n=5;
Actinomycetales|Rep: Oligoribonuclease - Tropheryma
whipplei (strain Twist) (Whipple's bacillus)
Length = 184
Score = 68.5 bits (160), Expect = 2e-10
Identities = 35/107 (32%), Positives = 64/107 (59%)
Frame = +1
Query: 421 IVWMDLEMTGLDIENDHIMEIACLVTDAQLNVVATGPDIVINLPEVTLNKMNNWCKVQHG 600
+VW+D EMTGL+ E D ++E+A +VTD L + G ++V++ L M+N+ H
Sbjct: 10 LVWVDCEMTGLNPERDELLEVAVVVTDKDLLPLDEGVNVVVSPSSEALGAMDNYVARMHR 69
Query: 601 ETGLTEACLKSDTSLAEAERIILKFVSNHVPEKICPLAGNSIYMDRM 741
+GL + L + ++EA+ ++ ++++ HV ++GNSI DR+
Sbjct: 70 VSGLLDE-LSNGVPVSEAQAMVKEYITKHVKTGGI-MSGNSIATDRL 114
>UniRef50_A6DMP4 Cluster: Oligoribonuclease; n=1; Lentisphaera
araneosa HTCC2155|Rep: Oligoribonuclease - Lentisphaera
araneosa HTCC2155
Length = 182
Score = 67.3 bits (157), Expect = 4e-10
Identities = 36/108 (33%), Positives = 59/108 (54%)
Frame = +1
Query: 418 RIVWMDLEMTGLDIENDHIMEIACLVTDAQLNVVATGPDIVINLPEVTLNKMNNWCKVQH 597
++ W+D+EMTGLD + + I+EIA L+TD +L+++ VI P+ L+ M+ W H
Sbjct: 3 KLFWIDMEMTGLDPDENRILEIAILITDHKLDIIDRF-HAVIRTPKAILDGMDEWNTRTH 61
Query: 598 GETGLTEACLKSDTSLAEAERIILKFVSNHVPEKICPLAGNSIYMDRM 741
GL + + + + E E +L H K L G+S+ +DRM
Sbjct: 62 TSNGLVKEAV-NGRFIQEVEIDLLNLADKHFANKQIFLCGSSLSLDRM 108
>UniRef50_Q097T4 Cluster: Oligoribonuclease; n=2;
Cystobacterineae|Rep: Oligoribonuclease - Stigmatella
aurantiaca DW4/3-1
Length = 186
Score = 62.1 bits (144), Expect = 1e-08
Identities = 41/105 (39%), Positives = 54/105 (51%)
Frame = +1
Query: 424 VWMDLEMTGLDIENDHIMEIACLVTDAQLNVVATGPDIVINLPEVTLNKMNNWCKVQHGE 603
VW+DLEMTGLD E I+EI ++T L V + VI PE L +M + H
Sbjct: 9 VWLDLEMTGLDPETCAIIEIGVIITGPDL-VPLAEIERVIWQPEEALARMEPVVREMHTR 67
Query: 604 TGLTEACLKSDTSLAEAERIILKFVSNHVPEKICPLAGNSIYMDR 738
GL S TSL AER ++ V+++ L GNSI+ DR
Sbjct: 68 NGLLTKVRASTTSLRVAERDVMALVASYCALGEGILCGNSIHTDR 112
>UniRef50_Q6XM84 Cluster: FirrV-1-A3; n=1; Feldmannia irregularis
virus a|Rep: FirrV-1-A3 - Feldmannia irregularis virus a
Length = 238
Score = 59.7 bits (138), Expect = 7e-08
Identities = 32/89 (35%), Positives = 53/89 (59%), Gaps = 6/89 (6%)
Frame = +1
Query: 427 WMDLEMTGLDIENDHIMEIACLVTDAQLNVVATGPDIVINLP-EVTLNKMNNWCK----- 588
W+D+E + LD ++E+A +VTD LN V +VI+ P + + K +NWCK
Sbjct: 14 WIDMETSSLDFSQSEVLEVALVVTDHHLN-VWDSLHLVIHHPINILMLKSSNWCKQRFCS 72
Query: 589 VQHGETGLTEACLKSDTSLAEAERIILKF 675
+++G GL + C S+TS+A+A +L+F
Sbjct: 73 LKYGGNGLFDECHYSETSIADATHKMLQF 101
>UniRef50_Q2HAN9 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 228
Score = 55.2 bits (127), Expect = 2e-06
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Frame = +1
Query: 421 IVWMDLEMTGLDIENDHIMEIACLVTDAQLNVV-ATGPDIVINLPEVTLNKMNNWC 585
+VW+D EMTGLD E D I+EI C++TD QL ++ +G V++ + + M+ WC
Sbjct: 19 LVWIDCEMTGLDPETDAIIEIYCIITDGQLKLLDESGWGTVVHQTKEKMGMMDEWC 74
Score = 35.1 bits (77), Expect = 1.8
Identities = 17/51 (33%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +1
Query: 589 VQHGETGLTEACLKSDTSLAEAERIILKFVSNHVPEK-ICPLAGNSIYMDR 738
V GE+GLT A ++S + +A +L ++ ++PE+ L+GNS++ D+
Sbjct: 118 VVDGESGLTAAVIQSTVTPQQAADGLLAYIQKYIPERGQALLSGNSVHADQ 168
>UniRef50_Q8QNE0 Cluster: EsV-1-139; n=1; Ectocarpus siliculosus
virus 1|Rep: EsV-1-139 - Ectocarpus siliculosus virus 1
Length = 274
Score = 51.2 bits (117), Expect = 3e-05
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Frame = +1
Query: 427 WMDLEMTGLDIENDHIMEIACLVTDAQLNVVATGPDIVINLPEVTLNKMNNWCKV----- 591
W+D+E TGLD + + I+EI +VTD LN + + ++ + + + + + WC+
Sbjct: 45 WIDMETTGLDTDTNLILEIVMVVTDRDLNEIDSMRLVLHHPHSILMARSSTWCRKKFCHR 104
Query: 592 QHGETGLTEACLKSDTSLAEAERIILKFVSNH 687
+ G GL EAC S S EAE + F ++
Sbjct: 105 REGGNGLFEACHFSALSHHEAEYRMWNFFDHY 136
>UniRef50_A3D8L9 Cluster: Exonuclease, RNase T and DNA polymerase
III; n=4; Shewanella baltica|Rep: Exonuclease, RNase T
and DNA polymerase III - Shewanella baltica OS155
Length = 204
Score = 46.8 bits (106), Expect = 6e-04
Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Frame = +1
Query: 451 LDIENDHIMEIACLVTDAQLNVVATGPDIVINLPEVTLNKMNNWCKVQHGETGLTEACLK 630
L +E I E+A +VTD++LN V +V++ + + + + W H ++GL A
Sbjct: 24 LGMEYYPIFELAFIVTDSELNQVGEALHVVVHQDDEHIARSHEWAIDVHTKSGLLAAVRA 83
Query: 631 SDTSLAEAERIILKFVS-------NHVPEKICPLAGNSIYMDR 738
S SLA+AE+++++ + + + AGNSI DR
Sbjct: 84 SSVSLAQAEQMVIEHLKALGIPKHDRKAKTGVVFAGNSIMFDR 126
>UniRef50_Q5KRE9 Cluster: Probable oligoribonuclease; n=2;
Corynebacterium glutamicum|Rep: Probable
oligoribonuclease - Corynebacterium glutamicum
(Brevibacterium flavum)
Length = 219
Score = 37.5 bits (83), Expect = 0.34
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Frame = +1
Query: 424 VWMDLEMTGLDIENDHIMEIACLVTDAQLNVVATGPDIVINLPEVTLNKMNNWCKVQHGE 603
+ +DLE TGLD + I+E+ ++ D L +A + L E +V H E
Sbjct: 8 IGLDLETTGLDAHSGVILEVGIIIFDDDLMPIAARSWLTNELVEKESIVSAPVVEVMHEE 67
Query: 604 TGLTEACLKSDTS-LAEAERIILKFVSNHVPEKICPLAGNSIYMDR 738
+GL E T L + E ++ K+ P+ G+S+ DR
Sbjct: 68 SGLWEDLKTGHTQPLRQVEAEASAWILEAGANKL-PMLGSSVTFDR 112
>UniRef50_Q7NC15 Cluster: PolC; n=1; Mycoplasma gallisepticum|Rep:
PolC - Mycoplasma gallisepticum
Length = 1501
Score = 35.5 bits (78), Expect = 1.4
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
Frame = +1
Query: 391 KNTKVDIAQRIVWMDLEMTGLDIENDHIMEIACLVTDAQLNVVATGPDIV-INLPEVTLN 567
K+ K+D +++ D+E TGL+ + I+EIA + A+LNV + V I E +
Sbjct: 408 KDLKLDQLSFVIF-DIETTGLNAYYEQIIEIAAVRVKAELNVTNHQLEFVQIGKFEKLIK 466
Query: 568 KMNNWCKVQHGETGLTEACLKSDTSLAEAERIILKFVSNHVPEKICPLAGNSIYMD 735
K TGL ++ LK A+ E+ +L+ N + + +A N I D
Sbjct: 467 NKKPLSKFTTQLTGLKDSDLKD----AQDEKTVLEEFVNFIQKDDVLVAHNGIDFD 518
>UniRef50_Q8A811 Cluster: DNA Pol III Epsilon Chain; n=21; cellular
organisms|Rep: DNA Pol III Epsilon Chain - Bacteroides
thetaiotaomicron
Length = 277
Score = 35.1 bits (77), Expect = 1.8
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +1
Query: 385 MKKNTKVDIAQRIVWMDLEMTGLDIENDHIMEIACL 492
+KK K+++ IV+ DLE TG +I D I+EI L
Sbjct: 15 LKKEMKLNLKNPIVFFDLETTGTNINTDRIVEICYL 50
>UniRef50_A6Q2C7 Cluster: DNA polymerase III, epsilon subunit; n=2;
Epsilonproteobacteria|Rep: DNA polymerase III, epsilon
subunit - Nitratiruptor sp. (strain SB155-2)
Length = 197
Score = 35.1 bits (77), Expect = 1.8
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +1
Query: 421 IVWMDLEMTGLDIENDHIMEIACL 492
IV++D E TGLD +ND I+ IACL
Sbjct: 24 IVFIDCETTGLDPKNDEILSIACL 47
>UniRef50_A2BVT4 Cluster: Possible DNA polymerase III, epsilon
subunit; n=6; Prochlorococcus marinus|Rep: Possible DNA
polymerase III, epsilon subunit - Prochlorococcus
marinus (strain MIT 9515)
Length = 270
Score = 34.7 bits (76), Expect = 2.4
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +1
Query: 352 TRNLSMSPKIMMKKNTKVDIAQRIVWMDLEMTGLDIENDHIMEIACLV 495
T N S+S + +N K++ +I+ +D E TGLD D I+EI C++
Sbjct: 29 TLNQSISNSKVRTQNKKIE---KILILDTETTGLDENKDEIIEIGCIL 73
>UniRef50_Q8WW27 Cluster: Putative C->U-editing enzyme APOBEC-4;
n=11; Amniota|Rep: Putative C->U-editing enzyme APOBEC-4
- Homo sapiens (Human)
Length = 367
Score = 34.7 bits (76), Expect = 2.4
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = -2
Query: 275 YMLNVTACHYTKKNEINSCTTLHYIHTISEIYLHQYYLY*SNYNHDQVY*IALYINNT 102
Y L ++ +K +SCT +YIH S ++ YL + YN+D + I LY NN+
Sbjct: 69 YELKTSSGSLVQKGHASSCTG-NYIHPESMLFEMNGYLDSAIYNNDSIRHIILYSNNS 125
>UniRef50_A7DSI3 Cluster: Putative uncharacterized protein; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: Putative
uncharacterized protein - Candidatus Nitrosopumilus
maritimus SCM1
Length = 513
Score = 34.3 bits (75), Expect = 3.2
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Frame = -2
Query: 395 FFFIIIFGDMDKLRVKNVI---ALRDNVDFIMLYVIVLM*NRLYMLNVTACHYTKKNEIN 225
FF + I G + +R K ++ L N F++L VIVL+ +LY + Y +N I
Sbjct: 109 FFSMFILGTILLIRTKKILDNTTLITNTIFLVLVVIVLVNIQLYYFENPSYFYLNQN-IE 167
Query: 224 SCTTLHYIHTISEIY 180
S T + I+T IY
Sbjct: 168 SNTISNNINTFPNIY 182
>UniRef50_A6DIP6 Cluster: Exonuclease; n=1; Lentisphaera araneosa
HTCC2155|Rep: Exonuclease - Lentisphaera araneosa
HTCC2155
Length = 261
Score = 33.5 bits (73), Expect = 5.6
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +1
Query: 400 KVDIAQRIVWMDLEMTGLDIENDHIMEIACL 492
K+++ + IV+ DLE TGL+ D I+EI C+
Sbjct: 2 KLNLQRPIVFFDLETTGLNPTEDRIIEICCI 32
>UniRef50_P42976 Cluster: Dihydrodipicolinate reductase; n=31;
Bacilli|Rep: Dihydrodipicolinate reductase - Bacillus
subtilis
Length = 267
Score = 33.5 bits (73), Expect = 5.6
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Frame = +1
Query: 484 ACLVTDAQLNVVATGPDIVINLPEVTLNKMNNWCKVQH------GETGLTEACLKSDTSL 645
A + TD T PD++I+L + K++ ++H G TG +EA LK TSL
Sbjct: 56 AFIYTDIHACFTETQPDVLIDLTTPEIGKVHTKIALEHGVRPVVGTTGFSEADLKELTSL 115
Query: 646 AEAERI 663
E + I
Sbjct: 116 TEEKGI 121
>UniRef50_A7EJY6 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Sclerotinia sclerotiorum 1980
Length = 541
Score = 33.1 bits (72), Expect = 7.4
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +1
Query: 280 LFHIKTITYNMIKSTLSRSAITFLTRNLSMSPKIMMKKNTKVDIAQRIVWMDL 438
LFHIK ++N + + +TF RNL MSP I + + K +W DL
Sbjct: 413 LFHIKRFSHNKFVDERNPTIVTFDARNLDMSPYI--EPDMKHARPGEPIWYDL 463
>UniRef50_Q2AKQ0 Cluster: Exonuclease; n=1; Bacillus
weihenstephanensis KBAB4|Rep: Exonuclease - Bacillus
weihenstephanensis KBAB4
Length = 271
Score = 32.7 bits (71), Expect = 9.8
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +1
Query: 433 DLEMTGLDIENDHIMEIACLVTDAQ 507
DLE TGLD +N+ ++EIA + TD +
Sbjct: 18 DLETTGLDYKNEQVVEIAAIRTDLE 42
>UniRef50_Q5CUZ3 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium parvum Iowa II
Length = 214
Score = 32.7 bits (71), Expect = 9.8
Identities = 16/65 (24%), Positives = 39/65 (60%)
Frame = +1
Query: 289 IKTITYNMIKSTLSRSAITFLTRNLSMSPKIMMKKNTKVDIAQRIVWMDLEMTGLDIEND 468
IKT+ + ++ L + +T++++NL+ P+ + ++ KV V M++E+ + IE++
Sbjct: 141 IKTLVVALYRNDLVKKLVTYISKNLNPKPEKYL-EDIKVYFDGDCVNMEMEIKEIGIEDE 199
Query: 469 HIMEI 483
+E+
Sbjct: 200 EQLEV 204
>UniRef50_Q0CUJ2 Cluster: Putative uncharacterized protein; n=2;
Trichocomaceae|Rep: Putative uncharacterized protein -
Aspergillus terreus (strain NIH 2624)
Length = 1453
Score = 32.7 bits (71), Expect = 9.8
Identities = 12/49 (24%), Positives = 32/49 (65%)
Frame = +1
Query: 340 ITFLTRNLSMSPKIMMKKNTKVDIAQRIVWMDLEMTGLDIENDHIMEIA 486
+T L+ +++S + + + K + AQR++W+D+ + +++++ I E+A
Sbjct: 1362 LTSLSPIVTLSVGVAVTSSLKTNAAQRLMWLDVVLQTINLQDKDIREVA 1410
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 689,258,670
Number of Sequences: 1657284
Number of extensions: 13257279
Number of successful extensions: 32271
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 30885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32233
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60911752460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -