Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_M13
(792 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin pr... 25 0.52
AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin pr... 25 0.52
AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory recept... 23 2.1
AM292374-1|CAL23186.2| 659|Tribolium castaneum gustatory recept... 22 4.9
AM292345-1|CAL23157.2| 384|Tribolium castaneum gustatory recept... 22 4.9
AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless prot... 22 4.9
AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholo... 22 4.9
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 21 8.5
>AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin
protein.
Length = 685
Score = 25.4 bits (53), Expect = 0.52
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 7 LHLVLSVRGGGQLFNK 54
LHLVL +RGG Q+F K
Sbjct: 67 LHLVLRLRGGMQIFVK 82
Score = 25.4 bits (53), Expect = 0.52
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 7 LHLVLSVRGGGQLFNK 54
LHLVL +RGG Q+F K
Sbjct: 143 LHLVLRLRGGMQIFVK 158
Score = 25.4 bits (53), Expect = 0.52
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 7 LHLVLSVRGGGQLFNK 54
LHLVL +RGG Q+F K
Sbjct: 219 LHLVLRLRGGMQIFVK 234
Score = 25.4 bits (53), Expect = 0.52
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 7 LHLVLSVRGGGQLFNK 54
LHLVL +RGG Q+F K
Sbjct: 295 LHLVLRLRGGMQIFVK 310
Score = 25.4 bits (53), Expect = 0.52
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 7 LHLVLSVRGGGQLFNK 54
LHLVL +RGG Q+F K
Sbjct: 371 LHLVLRLRGGMQIFVK 386
Score = 25.4 bits (53), Expect = 0.52
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 7 LHLVLSVRGGGQLFNK 54
LHLVL +RGG Q+F K
Sbjct: 447 LHLVLRLRGGMQIFVK 462
Score = 25.4 bits (53), Expect = 0.52
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 7 LHLVLSVRGGGQLFNK 54
LHLVL +RGG Q+F K
Sbjct: 523 LHLVLRLRGGMQIFVK 538
Score = 25.4 bits (53), Expect = 0.52
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 7 LHLVLSVRGGGQLFNK 54
LHLVL +RGG Q+F K
Sbjct: 599 LHLVLRLRGGMQIFVK 614
>AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin
protein.
Length = 112
Score = 25.4 bits (53), Expect = 0.52
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 7 LHLVLSVRGGGQLFNK 54
LHLVL +RGG Q+F K
Sbjct: 39 LHLVLRLRGGMQIFVK 54
>AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory receptor
candidate 59 protein.
Length = 489
Score = 23.4 bits (48), Expect = 2.1
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +3
Query: 357 SLLVSLPLQIKHLLTWREVLKKLLYQLPVLMPPCLLWV 470
S L L ++KH+L W+ + ++ L LLW+
Sbjct: 109 SKLHKLDNKLKHMLIWKSYKRTQIFITCELFFVILLWI 146
>AM292374-1|CAL23186.2| 659|Tribolium castaneum gustatory receptor
candidate 53 protein.
Length = 659
Score = 22.2 bits (45), Expect = 4.9
Identities = 7/26 (26%), Positives = 16/26 (61%)
Frame = +3
Query: 615 LHRKLLMDLLENYGVMAVVLNKTSFL 692
+HRK+++ L GV+ V++ + +
Sbjct: 404 VHRKIMVQSLGRVGVLVVIIGTLAII 429
>AM292345-1|CAL23157.2| 384|Tribolium castaneum gustatory receptor
candidate 24 protein.
Length = 384
Score = 22.2 bits (45), Expect = 4.9
Identities = 7/26 (26%), Positives = 16/26 (61%)
Frame = +3
Query: 615 LHRKLLMDLLENYGVMAVVLNKTSFL 692
+HRK+++ L GV+ V++ + +
Sbjct: 129 VHRKIMVQSLGRVGVLVVIIGTLAII 154
>AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless
protein.
Length = 302
Score = 22.2 bits (45), Expect = 4.9
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = -3
Query: 460 KHGGISTGS*YNNFFSTSLQVSRCFICSGKD 368
KH I FF S++ +R ++C KD
Sbjct: 48 KHYNIFACDGCAGFFKRSIRRNRQYVCKAKD 78
>AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholog
protein.
Length = 406
Score = 22.2 bits (45), Expect = 4.9
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = -3
Query: 460 KHGGISTGS*YNNFFSTSLQVSRCFICSGKD 368
KH I FF S++ +R ++C KD
Sbjct: 48 KHYNIFACDGCAGFFKRSIRRNRQYVCKAKD 78
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 21.4 bits (43), Expect = 8.5
Identities = 6/16 (37%), Positives = 7/16 (43%)
Frame = +1
Query: 745 QADWNGIPRPCX*CIC 792
+A W PC C C
Sbjct: 683 EAQWTSSDNPCTTCFC 698
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,860
Number of Sequences: 336
Number of extensions: 4354
Number of successful extensions: 19
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21480183
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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