Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_M11
         (787 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   4.8  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           22   4.8  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          22   6.4  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    22   6.4  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      22   6.4  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   8.4  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    21   8.4  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -1

Query: 592 LCNFFNVFCVFY 557
           LCNF+  FC  Y
Sbjct: 541 LCNFYRKFCARY 552


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 11/29 (37%), Positives = 12/29 (41%)
 Frame = +1

Query: 406 YQLCDCLVRSIIRSCRGTTPLGSNYQ*NC 492
           YQ CD L  S    C GT       Q +C
Sbjct: 197 YQFCDNLQYSFDNQCSGTIDWALPKQEDC 225


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +1

Query: 406 YQLCDCLVRSIIRSCRGT 459
           YQ CD L  S    C GT
Sbjct: 206 YQFCDNLQYSFDNQCSGT 223


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 477 LPVKLLMDMREHLTNVW 527
           LPV  L+ + E + N+W
Sbjct: 254 LPVDKLLQISEEVANIW 270


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 477 LPVKLLMDMREHLTNVW 527
           LPV  L+ + E + N+W
Sbjct: 252 LPVDKLLQISEEVANIW 268


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -2

Query: 189 ASSNPENIRAPSFSI*GTPG 130
           ASS PEN   PS  + G  G
Sbjct: 93  ASSTPENKTFPSIQVMGYQG 112


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 477 LPVKLLMDMREHLTNVW 527
           LPV  L+ + E + N+W
Sbjct: 252 LPVDKLLQISEKVANIW 268


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,547
Number of Sequences: 336
Number of extensions: 3857
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)