Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_M10
         (861 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z29074-1|CAA82315.1|  623|Homo sapiens cytokeratin 9 protein.          27   6.8  
X75015-1|CAA52924.1|  622|Homo sapiens keratin 9 protein.              27   6.8  
S69510-1|AAC60619.1|  622|Homo sapiens cytokeratin 9 protein.          27   6.8  

>Z29074-1|CAA82315.1|  623|Homo sapiens cytokeratin 9 protein.
          Length = 623

 Score = 26.6 bits (56), Expect(2) = 6.8
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = -3

Query: 496 GGDAVSAISGVGRGDSVRCGNAIGGS 419
           GG   S+ SG G G S  CG   GGS
Sbjct: 43  GGGRFSSSSGYGGGSSRVCGRGGGGS 68



 Score = 22.6 bits (46), Expect(2) = 6.8
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 301 GGFVNLARGFGGLADG 254
           GGF   +RGFGG + G
Sbjct: 88  GGFGGGSRGFGGASGG 103


>X75015-1|CAA52924.1|  622|Homo sapiens keratin 9 protein.
          Length = 622

 Score = 26.6 bits (56), Expect(2) = 6.8
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = -3

Query: 496 GGDAVSAISGVGRGDSVRCGNAIGGS 419
           GG   S+ SG G G S  CG   GGS
Sbjct: 42  GGGRFSSSSGYGGGSSRVCGRGGGGS 67



 Score = 22.6 bits (46), Expect(2) = 6.8
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 301 GGFVNLARGFGGLADG 254
           GGF   +RGFGG + G
Sbjct: 87  GGFGGGSRGFGGASGG 102


>S69510-1|AAC60619.1|  622|Homo sapiens cytokeratin 9 protein.
          Length = 622

 Score = 26.6 bits (56), Expect(2) = 6.8
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = -3

Query: 496 GGDAVSAISGVGRGDSVRCGNAIGGS 419
           GG   S+ SG G G S  CG   GGS
Sbjct: 42  GGGRFSSSSGYGGGSSRVCGRGGGGS 67



 Score = 22.6 bits (46), Expect(2) = 6.8
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 301 GGFVNLARGFGGLADG 254
           GGF   +RGFGG + G
Sbjct: 87  GGFGGGSRGFGGASGG 102


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,674,258
Number of Sequences: 237096
Number of extensions: 1487607
Number of successful extensions: 4163
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4153
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10984231046
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)