Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_M10
         (861 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-762|AAF59007.1|  746|Drosophila melanogaster CG8181-PA ...    26   3.3  
AE013599-172|AAF57355.1|  217|Drosophila melanogaster CG9397-PA ...    30   4.7  
AE014298-2053|AAF48388.1| 2248|Drosophila melanogaster CG9533-PA...    29   6.2  

>AE013599-762|AAF59007.1|  746|Drosophila melanogaster CG8181-PA
           protein.
          Length = 746

 Score = 25.8 bits (54), Expect(2) = 3.3
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +3

Query: 216 PAPLKLSSNITLKPSARPP 272
           PAP++ +SN TL  + RPP
Sbjct: 107 PAPVRTTSNGTLSTTRRPP 125



 Score = 23.0 bits (47), Expect(2) = 3.3
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 246 TLKPSARPPKPLARFTKPP 302
           T+KPSA P   +    KPP
Sbjct: 141 TMKPSAAPTTTITPTVKPP 159


>AE013599-172|AAF57355.1|  217|Drosophila melanogaster CG9397-PA
           protein.
          Length = 217

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 15/25 (60%), Positives = 17/25 (68%)
 Frame = +3

Query: 231 LSSNITLKPSARPPKPLARFTKPPT 305
           LSSNI LKP A+P +P   FT P T
Sbjct: 109 LSSNIELKPPAKPARP---FTSPST 130


>AE014298-2053|AAF48388.1| 2248|Drosophila melanogaster CG9533-PA
            protein.
          Length = 2248

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = -3

Query: 523  LPSVDAEAVGGDAVSAISGVGRGDSVRCGNAIGGSDQGRGEM 398
            L S +   VGG    + SG G G +V  GN  GGS    G +
Sbjct: 1761 LSSANGHGVGGSGSGSGSGSGSGSAV--GNGSGGSGSSNGNL 1800


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,779,067
Number of Sequences: 53049
Number of extensions: 474534
Number of successful extensions: 1815
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1810
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4147514904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)