Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_M09
(771 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z32681-6|CAA83605.1| 257|Caenorhabditis elegans Hypothetical pr... 219 2e-57
Z70680-3|CAA94575.1| 1263|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z66497-4|CAA91284.1| 401|Caenorhabditis elegans Hypothetical pr... 30 1.6
U43562-1|AAC47411.1| 1263|Caenorhabditis elegans DPY-26 protein. 30 1.6
Z69646-2|CAA93475.1| 1087|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z69634-5|CAA93456.1| 731|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z81544-7|CAB04432.2| 551|Caenorhabditis elegans Hypothetical pr... 28 8.5
>Z32681-6|CAA83605.1| 257|Caenorhabditis elegans Hypothetical
protein F56F3.5 protein.
Length = 257
Score = 219 bits (534), Expect = 2e-57
Identities = 108/181 (59%), Positives = 135/181 (74%)
Frame = +1
Query: 196 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 375
TKIASEGLKGRVFEVSL DL ++E FRKF+LIAE VQG+NVL NFH M +T DKL
Sbjct: 53 TKIASEGLKGRVFEVSLGDLN---NSEADFRKFKLIAEDVQGKNVLTNFHAMSMTHDKLC 109
Query: 376 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEI 555
+VKKW TLIEAN VKTTDGY LRVF I FT K +KT Y + +++R IR +M
Sbjct: 110 SIVKKWHTLIEANTAVKTTDGYTLRVFVIAFTKKSVNQVKKTSYTKTSKIRKIRSEMIGC 169
Query: 556 ITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLXRPRFEISKLMEL 735
I ++VT +L+EVV+KLIPDSI KDIEK C +YPL++V IRKVK++ RP+ ++ +L +L
Sbjct: 170 IEKEVTGCDLKEVVSKLIPDSIGKDIEKTCSKLYPLQEVYIRKVKIIKRPKVDLGRLHDL 229
Query: 736 H 738
H
Sbjct: 230 H 230
Score = 66.9 bits (156), Expect = 1e-11
Identities = 27/46 (58%), Positives = 37/46 (80%)
Frame = +3
Query: 96 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 233
VDPF+RK+WYD+KAP+MF+ RQVG TL+NRTQG + ++G+ F
Sbjct: 20 VDPFSRKEWYDIKAPNMFNTRQVGKTLINRTQGTKIASEGLKGRVF 65
>Z70680-3|CAA94575.1| 1263|Caenorhabditis elegans Hypothetical protein
C25G4.5 protein.
Length = 1263
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = -2
Query: 401 RVCHFLTIHLSLSVVRSMPWKLQSTLRPCTYSAINLNLRKDLSASVSACRSARE-TSKTL 225
R H H LS+ SMP ++ T+RP + + L++ + + + RS R S +
Sbjct: 1122 RKVHINGCHTLLSLALSMPSRMGETVRPSSIVSFLLHIANENNLQIVQDRSKRSWMSDFI 1181
Query: 224 PFNPSEAI 201
N SE++
Sbjct: 1182 VLNSSESL 1189
>Z66497-4|CAA91284.1| 401|Caenorhabditis elegans Hypothetical
protein K08F8.2 protein.
Length = 401
Score = 30.3 bits (65), Expect = 1.6
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = -2
Query: 413 LASMRVCHFLTIHLSLSVVRSMPWKLQ-STLRPCTY-SAINLNLRKDLSASVSACRSARE 240
+AS++ LT+ L L +P LQ L+P T S + + ++ S S S+ S+
Sbjct: 132 IASLQASSMLTVPL-LQAASHIPSMLQLCQLQPTTIQSPVYASTQQPASTSASSLFSSSS 190
Query: 239 TSKTLPFNPSEA 204
+S PF PSE+
Sbjct: 191 SSAFHPFRPSES 202
>U43562-1|AAC47411.1| 1263|Caenorhabditis elegans DPY-26 protein.
Length = 1263
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = -2
Query: 401 RVCHFLTIHLSLSVVRSMPWKLQSTLRPCTYSAINLNLRKDLSASVSACRSARE-TSKTL 225
R H H LS+ SMP ++ T+RP + + L++ + + + RS R S +
Sbjct: 1122 RKVHINGCHTLLSLALSMPSRMGETVRPSSIVSFLLHIANENNLQIVQDRSKRSWMSDFI 1181
Query: 224 PFNPSEAI 201
N SE++
Sbjct: 1182 VLNSSESL 1189
>Z69646-2|CAA93475.1| 1087|Caenorhabditis elegans Hypothetical protein
F57C7.1b protein.
Length = 1087
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 763 PPCLHRLRREVPSTSRSRNGAXST 692
PP HR+R + PS S SR G S+
Sbjct: 971 PPLQHRMRSDSPSPSASRTGNQSS 994
>Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical protein
F57C7.1a protein.
Length = 1209
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 763 PPCLHRLRREVPSTSRSRNGAXST 692
PP HR+R + PS S SR G S+
Sbjct: 971 PPLQHRMRSDSPSPSASRTGNQSS 994
>Z69634-5|CAA93456.1| 731|Caenorhabditis elegans Hypothetical
protein B0001.7 protein.
Length = 731
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +1
Query: 193 VTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRN 327
+ + L+G + +S+ D +A TD E S + R IAE+++ R+
Sbjct: 193 IVQYCGGSLRGCSWIMSVVDGKAQTDGEFSDKDLREIAEFIRERH 237
>Z81544-7|CAB04432.2| 551|Caenorhabditis elegans Hypothetical
protein F49C5.3 protein.
Length = 551
Score = 27.9 bits (59), Expect = 8.5
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = +1
Query: 469 TNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELRE---VVNKLIPDSIAKDIE 636
T + S+S + QH Q RA++K M E + V N ++ E VV K + D +I+
Sbjct: 198 TGRSSISAGFDVF-QHLQNRAVQKTMIEQLESAVRNQDVMEMGNVVKKGLEDGTLSEIQ 255
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,859,606
Number of Sequences: 27780
Number of extensions: 389717
Number of successful extensions: 1107
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1106
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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