Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_M08
(819 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70203-4|CAA94107.1| 322|Caenorhabditis elegans Hypothetical pr... 337 6e-93
AF003389-2|AAC71132.1| 321|Caenorhabditis elegans Hypothetical ... 328 3e-90
U58727-5|AAB00585.1| 1106|Caenorhabditis elegans Hypothetical pr... 56 3e-08
Z81028-1|CAB02690.1| 1099|Caenorhabditis elegans Hypothetical pr... 55 5e-08
AL021493-6|CAA16394.2| 781|Caenorhabditis elegans Hypothetical ... 29 3.0
U37429-10|AAN63413.2| 100|Caenorhabditis elegans Hypothetical p... 29 4.0
Z81117-4|CAB03319.1| 249|Caenorhabditis elegans Hypothetical pr... 28 9.2
>Z70203-4|CAA94107.1| 322|Caenorhabditis elegans Hypothetical
protein C05G5.4 protein.
Length = 322
Score = 337 bits (828), Expect = 6e-93
Identities = 157/221 (71%), Positives = 176/221 (79%)
Frame = +1
Query: 157 YAETRKNLILTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFG 336
Y T NL + +TKVIVQGFTGKQGTFH +Q L+Y TKVVGGV+ KAGTEHLG PVF
Sbjct: 21 YNSTYNNLKINKDTKVIVQGFTGKQGTFHGKQMLEYNTKVVGGVNANKAGTEHLGLPVFK 80
Query: 337 TVKEAKAGTGATASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKHALLRQ 516
V EA+ TGA ASVIYVP +PL+VCITEG+PQHDMVRVK LL+Q
Sbjct: 81 NVSEARNKTGADASVIYVPASAAGSAIEEAMDAEIPLVVCITEGIPQHDMVRVKSRLLKQ 140
Query: 517 NKSRLVGPNCPGIIAPEKCKIGIMPAAVHKRGCIGVVSRSGTLTYEACHQTTITGLGQTL 696
NK+RLVGPNCPGII+ ++CKIGIMP +HKRGCIG+VSRSGTLTYEA HQTT G GQTL
Sbjct: 141 NKTRLVGPNCPGIISADQCKIGIMPGHIHKRGCIGIVSRSGTLTYEAVHQTTQVGFGQTL 200
Query: 697 CVGIGGDPFNGTDFIDCLXVFLKDPXTKGIILIGEIGGNAE 819
CVGIGGDPFNGT+FIDCL VFL+DP TKGIILIGEIGG+AE
Sbjct: 201 CVGIGGDPFNGTNFIDCLNVFLEDPETKGIILIGEIGGSAE 241
>AF003389-2|AAC71132.1| 321|Caenorhabditis elegans Hypothetical
protein F23H11.3 protein.
Length = 321
Score = 328 bits (806), Expect = 3e-90
Identities = 154/221 (69%), Positives = 174/221 (78%)
Frame = +1
Query: 157 YAETRKNLILTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFG 336
Y +TR NL++ TKVIVQGFTG+QGTFHS+Q L+Y T +VGGVSP KAG HLG PVFG
Sbjct: 22 YNDTRNNLMINKSTKVIVQGFTGRQGTFHSKQMLEYNTNLVGGVSPNKAGQTHLGLPVFG 81
Query: 337 TVKEAKAGTGATASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKHALLRQ 516
+V EAK TGA A+VIYVP G + LIV ITEG+PQ DMVRVK+ LL+Q
Sbjct: 82 SVAEAKDRTGADATVIYVPAAGAARAIHEAMDAEIGLIVAITEGIPQQDMVRVKNRLLKQ 141
Query: 517 NKSRLVGPNCPGIIAPEKCKIGIMPAAVHKRGCIGVVSRSGTLTYEACHQTTITGLGQTL 696
NKSRL+GPNCPGIIA CKIGIMP +HK+GCIG+VSRSGTLTYEA HQTT GLGQT
Sbjct: 142 NKSRLLGPNCPGIIASGDCKIGIMPGHIHKKGCIGIVSRSGTLTYEAVHQTTTVGLGQTR 201
Query: 697 CVGIGGDPFNGTDFIDCLXVFLKDPXTKGIILIGEIGGNAE 819
C+GIGGDPFNGT+FIDCL VFL+D TKGIILIGEIGG AE
Sbjct: 202 CIGIGGDPFNGTNFIDCLEVFLEDEQTKGIILIGEIGGQAE 242
>U58727-5|AAB00585.1| 1106|Caenorhabditis elegans Hypothetical
protein D1005.1 protein.
Length = 1106
Score = 56.0 bits (129), Expect = 3e-08
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 8/133 (6%)
Frame = +1
Query: 445 LIVCITEGVPQHDMVRVKHALLRQNKSRLVGPNCPGIIAPEKCKIG--------IMPAAV 600
+I I EGVP++ R + LVGP G I P KIG I+ + +
Sbjct: 593 VIAIIAEGVPENQ-TRKLLKIAHDRGVTLVGPATVGGIKPGCFKIGNTGGMMDNILASKL 651
Query: 601 HKRGCIGVVSRSGTLTYEACHQTTITGLGQTLCVGIGGDPFNGTDFIDCLXVFLKDPXTK 780
++ G + VSRSG ++ E + + G + IGGD + G+ + D + + D K
Sbjct: 652 YRPGSVAYVSRSGGMSNELNNIISQNTNGVYEGIAIGGDRYPGSTYTDHVIRYQNDDRVK 711
Query: 781 GIILIGEIGGNAE 819
I+L+GE+GG E
Sbjct: 712 MIVLLGEVGGVEE 724
>Z81028-1|CAB02690.1| 1099|Caenorhabditis elegans Hypothetical
protein B0365.1 protein.
Length = 1099
Score = 55.2 bits (127), Expect = 5e-08
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 8/133 (6%)
Frame = +1
Query: 445 LIVCITEGVPQHDMVRVKHALLRQNKSRLVGPNCPGIIAPEKCKIG--------IMPAAV 600
+I I EGVP++ R + L+GP G I P KIG I+ + +
Sbjct: 589 VIAIIAEGVPENQ-TRKLLKIAEDKGVTLIGPATVGGIKPGCFKIGNTGGMMDNILASKL 647
Query: 601 HKRGCIGVVSRSGTLTYEACHQTTITGLGQTLCVGIGGDPFNGTDFIDCLXVFLKDPXTK 780
++ G + VSRSG ++ E + + G + IGGD + G+ + D + + D K
Sbjct: 648 YRPGSVAYVSRSGGMSNELNNIISQNTNGVYEGIAIGGDRYPGSTYTDHVMRYQHDDRVK 707
Query: 781 GIILIGEIGGNAE 819
I+L+GE+GG E
Sbjct: 708 MIVLLGEVGGIEE 720
>AL021493-6|CAA16394.2| 781|Caenorhabditis elegans Hypothetical
protein Y51A2B.6 protein.
Length = 781
Score = 29.5 bits (63), Expect = 3.0
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +1
Query: 94 VLSKFKDGLKLGNVRFASGNPYAETRKNLILTSETKV--IVQGFTGKQGTFHSQQALDYG 267
V FKD +KL N+R A Y+E ++L+ + +V + +G G + L
Sbjct: 280 VFEPFKDVVKLMNLREALPRQYSEHDQSLMSKNLKQVMNMAKGLKSSGGDIKRLENLRSN 339
Query: 268 TKVVGGVSPKKAGTEHLGK 324
TK + V K G LG+
Sbjct: 340 TKELEMVDLKNIGDPWLGR 358
>U37429-10|AAN63413.2| 100|Caenorhabditis elegans Hypothetical
protein F09E5.16 protein.
Length = 100
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -1
Query: 405 SSRGRYINNRGSCSCACLCLFD-CTKHRLTK 316
SSRG + R + S AC CL CT H +TK
Sbjct: 70 SSRGSVMRRRSAGSYACPCLHKVCTYHCMTK 100
>Z81117-4|CAB03319.1| 249|Caenorhabditis elegans Hypothetical
protein T06E6.10 protein.
Length = 249
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +3
Query: 444 PHCVHYRRCATT*YGASKTCPLETKQ 521
P C+H C TT K C L T Q
Sbjct: 133 PTCIHVNACTTTKCSPGKKCALHTVQ 158
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,223,438
Number of Sequences: 27780
Number of extensions: 426968
Number of successful extensions: 1100
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1100
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2019417216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -