Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_M06
         (803 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_8782| Best HMM Match : CN_hydrolase (HMM E-Value=0)                178   4e-53
SB_11184| Best HMM Match : CN_hydrolase (HMM E-Value=4.4e-10)         147   8e-36
SB_19326| Best HMM Match : No HMM Matches (HMM E-Value=.)             100   1e-21
SB_33972| Best HMM Match : CN_hydrolase (HMM E-Value=1.30321e-43)      97   1e-20
SB_42741| Best HMM Match : CN_hydrolase (HMM E-Value=4.6e-14)          37   0.022
SB_1519| Best HMM Match : F5_F8_type_C (HMM E-Value=0)                 30   1.9  
SB_55367| Best HMM Match : Granulin (HMM E-Value=0.00023)              30   2.5  
SB_43101| Best HMM Match : TPR_2 (HMM E-Value=0.72)                    29   3.3  
SB_22269| Best HMM Match : Metallothionein (HMM E-Value=0.89)          29   4.4  
SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.4  
SB_28550| Best HMM Match : Fer2_2 (HMM E-Value=2.49992e-42)            28   7.7  
SB_16335| Best HMM Match : Fels1 (HMM E-Value=9.9)                     28   7.7  
SB_8850| Best HMM Match : LIM (HMM E-Value=0.51)                       28   7.7  

>SB_8782| Best HMM Match : CN_hydrolase (HMM E-Value=0)
          Length = 242

 Score =  178 bits (433), Expect(2) = 4e-53
 Identities = 87/172 (50%), Positives = 116/172 (67%), Gaps = 1/172 (0%)
 Frame = +3

Query: 93  MLXXGFNLALIQLSVGPNKSKHXAQAVKEIHLAKXXGAQLVALPECFNSPYGTKYFDEYA 272
           M    F + L+QL+V  NK ++  +A ++I  A   GA++VALPECFNSPYGT+YF +YA
Sbjct: 1   MAASVFRIGLVQLAVTANKLQNLQRAREKIKEAVAAGAKIVALPECFNSPYGTQYFKDYA 60

Query: 273 EEVPSGETSRALSKXXXXXXXXXXXXXXPERYE-KKLYNTCTVWDDTGKLLAQHRKMHLF 449
           EE+P GE+S  L++              PER   +KLYNT   +D +G L+ +HRK+HLF
Sbjct: 61  EEIP-GESSNMLAEVAKETGAYIVGGSIPERASNRKLYNTSLSYDPSGNLMGKHRKIHLF 119

Query: 450 DIDIPNKITFKESEVLSAGDKITSFDFLGSKIGIGICYDLRFPEMAHLMAKE 605
           DID+P KI F+ESEVLS G+ +T  D    KIGIGICYD+RFPE+A L AK+
Sbjct: 120 DIDVPGKIRFQESEVLSPGENLTILDTEYCKIGIGICYDMRFPELAQLYAKK 171



 Score = 48.8 bits (111), Expect(2) = 4e-53
 Identities = 18/31 (58%), Positives = 24/31 (77%)
 Frame = +3

Query: 711 ALVSPARDSAAGYVAWGHSLLVXPWGQVVEQ 803
           A +SPARD  A Y+AWGHS +V PWG++V +
Sbjct: 172 ATISPARDDNATYIAWGHSTVVNPWGKIVSK 202


>SB_11184| Best HMM Match : CN_hydrolase (HMM E-Value=4.4e-10)
          Length = 128

 Score =  147 bits (357), Expect = 8e-36
 Identities = 70/128 (54%), Positives = 88/128 (68%), Gaps = 1/128 (0%)
 Frame = +3

Query: 225 ECFNSPYGTKYFDEYAEEVPSGETSRALSKXXXXXXXXXXXXXXPERYEK-KLYNTCTVW 401
           ECFNSPYGT+YF +YAEE+P GE+S  L++              PER    KLYNT   +
Sbjct: 1   ECFNSPYGTQYFKDYAEEIP-GESSNMLAEVAKETGAYIVGGSIPERASNGKLYNTSLSY 59

Query: 402 DDTGKLLAQHRKMHLFDIDIPNKITFKESEVLSAGDKITSFDFLGSKIGIGICYDLRFPE 581
           D +G L+ +HRK+HLFDID+P KI F+ESEVLS G+ +T  D    KIGIGICYD+RFPE
Sbjct: 60  DPSGNLMGKHRKIHLFDIDVPGKIRFQESEVLSPGENLTILDTEYCKIGIGICYDMRFPE 119

Query: 582 MAHLMAKE 605
           +A L AK+
Sbjct: 120 LAQLYAKK 127


>SB_19326| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 117

 Score =  100 bits (240), Expect = 1e-21
 Identities = 50/111 (45%), Positives = 70/111 (63%), Gaps = 1/111 (0%)
 Frame = +3

Query: 108 FNLALIQLSVGPNKSKHXAQAVKEIHLAKXXGAQLVALPECFNSPYGTKYFDEYAEEVPS 287
           F + L+QL+V  NK ++  +A ++I  A   GA++VALPECFNSPYGT+YF +YAEE+P 
Sbjct: 8   FRIGLVQLAVTANKLQNLQRAREKIKEAVAAGAKIVALPECFNSPYGTQYFKDYAEEIP- 66

Query: 288 GETSRALSKXXXXXXXXXXXXXXPERYEK-KLYNTCTVWDDTGKLLAQHRK 437
           GE+S  L++              PER    KLYNT   +D +G L+ +HRK
Sbjct: 67  GESSNMLAEVAKETGAYIVGGSIPERASNGKLYNTSLSYDPSGNLMGKHRK 117


>SB_33972| Best HMM Match : CN_hydrolase (HMM E-Value=1.30321e-43)
          Length = 294

 Score = 97.5 bits (232), Expect = 1e-20
 Identities = 64/223 (28%), Positives = 106/223 (47%), Gaps = 3/223 (1%)
 Frame = +3

Query: 114 LALIQLSVGPNKSKHXAQAVKEIHLAKXXGAQLVALPECFNSPYGTKY-FDEYAEEVPSG 290
           +A+ Q++   +   +  Q  + I      GA++V LPE F+     K    E AE +   
Sbjct: 9   IAICQMTCTADLEANFRQCQELIRKGSRKGAEVVFLPEGFDFLMKDKEKILELAEHLDGP 68

Query: 291 ETSRA--LSKXXXXXXXXXXXXXXPERYEKKLYNTCTVWDDTGKLLAQHRKMHLFDIDIP 464
             S+   L++                   +++ N   V D+ G++ A + K HLFD++I 
Sbjct: 69  RISKMCKLAEENGVWLSLGGFHCKHPSETRRVLNCHVVIDNKGRIAASYNKTHLFDVNIE 128

Query: 465 NKITFKESEVLSAGDKITSFDFLGSKIGIGICYDLRFPEMAHLMAKEGCSLLIYPGAFNM 644
                KES  ++ GD+I           +  CYDLRFPE + ++A++G  +L +P AF  
Sbjct: 129 GGPCLKESAFIAHGDRI-----------VPPCYDLRFPEFSMILARQGADILSFPSAFTF 177

Query: 645 TTGPRHWELLGRARATDXQLWVALVSPARDSAAGYVAWGHSLL 773
            TG  HWE+L R+RA + Q +V   +       G  A+GHS++
Sbjct: 178 HTGSAHWEVLLRSRAIETQCYVVAAAQCGKLYEGREAYGHSMV 220


>SB_42741| Best HMM Match : CN_hydrolase (HMM E-Value=4.6e-14)
          Length = 255

 Score = 36.7 bits (81), Expect = 0.022
 Identities = 48/197 (24%), Positives = 75/197 (38%), Gaps = 1/197 (0%)
 Frame = +3

Query: 189 AKXXGAQLVALPECFNSPYGTKYFDEYAEEVPSGETSRALSKXXXXXXXXXXXXXXPERY 368
           A      ++ LPE F + + + +    AE +     S    K               E  
Sbjct: 28  ATLKNVDVIVLPEMFTTGF-SMHPKPIAETMDGNSVSWLKQKAATLDAAIVGSIIIKE-- 84

Query: 369 EKKLYNTCTVWDDTGKLLAQHRKMHLFDIDIPNKITFKESEVLSAGDKITSFDFLGSKIG 548
           ++  YN       TG +   + K H F +         E+E  + G+K     + G KI 
Sbjct: 85  QENYYNRLLFVHPTGTI-ESYDKRHAFTLA-------GENEKYATGNKKLIVSYKGWKIC 136

Query: 549 IGICYDLRFPEMAHLMAKEGCSLLIYPGAFNMTTGPRH-WELLGRARATDXQLWVALVSP 725
             ICYDLRFP  +  +  E   +L+Y    N      H W  L +ARA +   +   V+ 
Sbjct: 137 PLICYDLRFPVWSRNV--ENYDVLMY--VANWPKPRIHAWNTLLKARAIENMSYCIGVNR 192

Query: 726 ARDSAAGYVAWGHSLLV 776
               A G+   G+S+ V
Sbjct: 193 VGVDANGHEYSGNSIAV 209


>SB_1519| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
          Length = 943

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 7/43 (16%)
 Frame = -1

Query: 734 VPGGAHER----HPQLXVG---STRPPQQLPMPGTGRHVERPR 627
           V GGAHE+    H  L +    +T PP   P P T +HV +P+
Sbjct: 865 VSGGAHEKKTTLHANLYIPKPTTTPPPTAPPEPATKKHVSQPK 907


>SB_55367| Best HMM Match : Granulin (HMM E-Value=0.00023)
          Length = 565

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 7/61 (11%)
 Frame = +2

Query: 596 GQGRLFSPHLSG-------GVQHDDRSPALGAAGEGACYRPXAVGGAREPRPGQRRGVRR 754
           G G+   P L G       G+  D ++   G  G+G   RP   G  +  RPG +R  +R
Sbjct: 380 GDGKTIRPGLHGDGKTRRPGLHGDGKTSRPGLKGDGKTRRPGPQGDGKTRRPGLQRDRKR 439

Query: 755 L 757
           +
Sbjct: 440 M 440


>SB_43101| Best HMM Match : TPR_2 (HMM E-Value=0.72)
          Length = 1041

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -1

Query: 803 LFHHLSPGVDEQRVSPGDVPRGAVPGGAHERHP 705
           +   L+P  D +RVSP  +P G++P G   + P
Sbjct: 895 VMRRLAPEFDVRRVSPVPIPDGSIPPGGSVKLP 927


>SB_22269| Best HMM Match : Metallothionein (HMM E-Value=0.89)
          Length = 251

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +1

Query: 724 PPGTAPRGTSPGDTRCSSTPG 786
           PPGT    T PG T C++ PG
Sbjct: 109 PPGTTACPTPPGTTACTTPPG 129


>SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1572

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 18/46 (39%), Positives = 18/46 (39%), Gaps = 3/46 (6%)
 Frame = -1

Query: 785 PGVDEQRVSPGDVPRGAV--PGGAHERHPQLXVGSTR-PPQQLPMP 657
           PG   QRV P   P   V  PG  H R P       R PP   P P
Sbjct: 414 PGASHQRVRPPGAPHPRVPPPGAPHPRFPPPGAPHPRVPPPGAPHP 459


>SB_28550| Best HMM Match : Fer2_2 (HMM E-Value=2.49992e-42)
          Length = 1644

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = -3

Query: 603 PWPSDVPSQGTSDRNICRCQSLIPKSRTM*SYRPQREP 490
           P PS    +G+ D NICRC    P    M S+     P
Sbjct: 286 PKPSKEKIEGSFDGNICRCTGYRPILDAMKSFAADASP 323


>SB_16335| Best HMM Match : Fels1 (HMM E-Value=9.9)
          Length = 301

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
 Frame = +2

Query: 554 HMLRSEVP*DGTSDGQGRLFSPHLSGGVQHDDRS-PALGAAGEG 682
           H+L +EVP D         +  HL GG  H     P LG A  G
Sbjct: 32  HLLATEVPPDCDPGKDESRYYCHLDGGADHGGHQVPILGLASTG 75


>SB_8850| Best HMM Match : LIM (HMM E-Value=0.51)
          Length = 1039

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = -1

Query: 719 HERHPQLXVGSTRPPQQLPMPGTGRHVERPRIDEERTTFLGHQMCHLREP-QIVTYAD 549
           H  +P++ V +      L +P      E+P+ +E R + LGH++ HL EP Q+V   D
Sbjct: 661 HRNNPRIAVKAQTYHHYLCIPA-----EKPK-EEWRPSELGHKLDHLAEPSQVVCCGD 712


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,124,263
Number of Sequences: 59808
Number of extensions: 587837
Number of successful extensions: 1632
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1623
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2227723674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)