Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_M06
(803 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132860-11|CAB60517.1| 440|Caenorhabditis elegans Hypothetical... 121 5e-28
AF069986-1|AAC39136.1| 440|Caenorhabditis elegans nitrilase and... 121 5e-28
U23139-15|AAK31488.1| 387|Caenorhabditis elegans Hypothetical p... 53 2e-07
Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z92779-2|CAD56561.2| 1475|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical p... 29 2.9
Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical p... 29 2.9
Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z73912-5|CAD56619.2| 1475|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical pr... 29 2.9
M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein. 29 2.9
Z81568-10|CAB04600.1| 441|Caenorhabditis elegans Hypothetical p... 29 5.1
Z98877-17|CAB11571.1| 389|Caenorhabditis elegans Hypothetical p... 28 6.8
U97005-9|AAK72085.1| 829|Caenorhabditis elegans Hypothetical pr... 28 6.8
AL021497-21|CAA16413.1| 389|Caenorhabditis elegans Hypothetical... 28 6.8
AF273823-1|AAG15172.1| 388|Caenorhabditis elegans nuclear recep... 28 6.8
AF273822-1|AAG15171.1| 387|Caenorhabditis elegans nuclear recep... 28 6.8
AF273821-1|AAG15170.1| 383|Caenorhabditis elegans nuclear recep... 28 6.8
Z81100-4|CAE11309.1| 333|Caenorhabditis elegans Hypothetical pr... 28 9.0
Z81100-2|CAB03192.2| 332|Caenorhabditis elegans Hypothetical pr... 28 9.0
Z75712-7|CAB00046.1| 208|Caenorhabditis elegans Hypothetical pr... 28 9.0
AF016442-3|AAB65917.2| 597|Caenorhabditis elegans Hypothetical ... 28 9.0
>AL132860-11|CAB60517.1| 440|Caenorhabditis elegans Hypothetical
protein Y56A3A.13 protein.
Length = 440
Score = 121 bits (292), Expect = 5e-28
Identities = 75/234 (32%), Positives = 112/234 (47%), Gaps = 4/234 (1%)
Frame = +3
Query: 114 LALIQLSVGPNKSKHXAQAVKEIHLAKXXGAQLVALPECFN--SPYGTKYFD-EYAEEVP 284
+A+ Q++ + K+ A I A ++V LPECF+ + D A +
Sbjct: 17 IAVCQMTSDNDLEKNFQAAKNMIERAGEKKCEMVFLPECFDFIGLNKNEQIDLAMATDCE 76
Query: 285 SGETSRALSKXXXXXXXXXXXXXXPERYEKKLYNTCTVWDDTGKLLAQHRKMHLFDIDIP 464
E R L++ +NT + D G A++ K+HLFD++IP
Sbjct: 77 YMEKYRELARKHNIWLSLGGLHHKDPSDAAHPWNTHLIIDSDGVTRAEYNKLHLFDLEIP 136
Query: 465 NKITFKESEVLSAG-DKITSFDFLGSKIGIGICYDLRFPEMAHLMAKEGCSLLIYPGAFN 641
K+ ESE AG + I D ++G+ ICYD+RFPE++ K G LL +P AF
Sbjct: 137 GKVRLMESEFSKAGTEMIPPVDTPIGRLGLSICYDVRFPELSLWNRKRGAQLLSFPSAFT 196
Query: 642 MTTGPRHWELLGRARATDXQLWVALVSPARDSAAGYVAWGHSLLVXPWGQVVEQ 803
+ TG HWE L RARA + Q +V + ++GHS++V PWG VV Q
Sbjct: 197 LNTGLAHWETLLRARAIENQCYVVAAAQTGAHNPKRQSYGHSMVVDPWGAVVAQ 250
>AF069986-1|AAC39136.1| 440|Caenorhabditis elegans nitrilase and
fragile histidinetriad fusion protein NitFhit protein.
Length = 440
Score = 121 bits (292), Expect = 5e-28
Identities = 75/234 (32%), Positives = 112/234 (47%), Gaps = 4/234 (1%)
Frame = +3
Query: 114 LALIQLSVGPNKSKHXAQAVKEIHLAKXXGAQLVALPECFN--SPYGTKYFD-EYAEEVP 284
+A+ Q++ + K+ A I A ++V LPECF+ + D A +
Sbjct: 17 IAVCQMTSDNDLEKNFQAAKNMIERAGEKKCEMVFLPECFDFIGLNKNEQIDLAMATDCE 76
Query: 285 SGETSRALSKXXXXXXXXXXXXXXPERYEKKLYNTCTVWDDTGKLLAQHRKMHLFDIDIP 464
E R L++ +NT + D G A++ K+HLFD++IP
Sbjct: 77 YMEKYRELARKHNIWLSLGGLHHKDPSDAAHPWNTHLIIDSDGVTRAEYNKLHLFDLEIP 136
Query: 465 NKITFKESEVLSAG-DKITSFDFLGSKIGIGICYDLRFPEMAHLMAKEGCSLLIYPGAFN 641
K+ ESE AG + I D ++G+ ICYD+RFPE++ K G LL +P AF
Sbjct: 137 GKVRLMESEFSKAGTEMIPPVDTPIGRLGLSICYDVRFPELSLWNRKRGAQLLSFPSAFT 196
Query: 642 MTTGPRHWELLGRARATDXQLWVALVSPARDSAAGYVAWGHSLLVXPWGQVVEQ 803
+ TG HWE L RARA + Q +V + ++GHS++V PWG VV Q
Sbjct: 197 LNTGLAHWETLLRARAIENQCYVVAAAQTGAHNPKRQSYGHSMVVDPWGAVVAQ 250
>U23139-15|AAK31488.1| 387|Caenorhabditis elegans Hypothetical
protein F13H8.7 protein.
Length = 387
Score = 53.2 bits (122), Expect = 2e-07
Identities = 45/160 (28%), Positives = 73/160 (45%), Gaps = 8/160 (5%)
Frame = +3
Query: 180 IHLAKXXGAQLVALPECFNSPYG--TKY---FDEYAEEVPSGETSRALSKXXXXXXXXXX 344
I A GA ++ L E + P+ T+ + E+AE V +G T++ LSK
Sbjct: 106 IEAAASAGANVIGLQEAWTMPFAFCTRERLPWTEFAESVYTGPTTQFLSKLAVKHDIVII 165
Query: 345 XXXXPERYEKK---LYNTCTVWDDTGKLLAQHRKMHLFDIDIPNKITFKESEVLSAGDKI 515
ER E+K ++NT V TG+++ + RK H+ + N+ T+ L G +
Sbjct: 166 SPIL-ERDEEKDDVIWNTAVVISHTGRVIGRSRKNHIPRVGDFNESTYYMESTL--GHPV 222
Query: 516 TSFDFLGSKIGIGICYDLRFPEMAHLMAKEGCSLLIYPGA 635
F+ +IGI ICY P+ + A G ++ P A
Sbjct: 223 --FETKYGRIGINICYGRHHPQNWMMYALNGAEIIFNPSA 260
>Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical protein
ZK524.2e protein.
Length = 1816
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -2
Query: 460 MSMSKRCIFLCCAKSFPVSSQTVQVLYNFFSYL 362
M + + +F CA+ FP+ +VQ Y F Y+
Sbjct: 1143 MQQTYQLMFESCAEQFPILDTSVQFWYEFIDYI 1175
>Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical protein
ZK524.2d protein.
Length = 2155
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -2
Query: 460 MSMSKRCIFLCCAKSFPVSSQTVQVLYNFFSYL 362
M + + +F CA+ FP+ +VQ Y F Y+
Sbjct: 1482 MQQTYQLMFESCAEQFPILDTSVQFWYEFIDYI 1514
>Z92779-2|CAD56561.2| 1475|Caenorhabditis elegans Hypothetical
protein ZK524.2c protein.
Length = 1475
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -2
Query: 460 MSMSKRCIFLCCAKSFPVSSQTVQVLYNFFSYL 362
M + + +F CA+ FP+ +VQ Y F Y+
Sbjct: 802 MQQTYQLMFESCAEQFPILDTSVQFWYEFIDYI 834
>Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical protein
ZK524.2a protein.
Length = 1813
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -2
Query: 460 MSMSKRCIFLCCAKSFPVSSQTVQVLYNFFSYL 362
M + + +F CA+ FP+ +VQ Y F Y+
Sbjct: 1140 MQQTYQLMFESCAEQFPILDTSVQFWYEFIDYI 1172
>Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical
protein ZK524.2e protein.
Length = 1816
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -2
Query: 460 MSMSKRCIFLCCAKSFPVSSQTVQVLYNFFSYL 362
M + + +F CA+ FP+ +VQ Y F Y+
Sbjct: 1143 MQQTYQLMFESCAEQFPILDTSVQFWYEFIDYI 1175
>Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical
protein ZK524.2d protein.
Length = 2155
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -2
Query: 460 MSMSKRCIFLCCAKSFPVSSQTVQVLYNFFSYL 362
M + + +F CA+ FP+ +VQ Y F Y+
Sbjct: 1482 MQQTYQLMFESCAEQFPILDTSVQFWYEFIDYI 1514
>Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical protein
ZK524.2a protein.
Length = 1813
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -2
Query: 460 MSMSKRCIFLCCAKSFPVSSQTVQVLYNFFSYL 362
M + + +F CA+ FP+ +VQ Y F Y+
Sbjct: 1140 MQQTYQLMFESCAEQFPILDTSVQFWYEFIDYI 1172
>Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical protein
ZK524.2e protein.
Length = 1816
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -2
Query: 460 MSMSKRCIFLCCAKSFPVSSQTVQVLYNFFSYL 362
M + + +F CA+ FP+ +VQ Y F Y+
Sbjct: 1143 MQQTYQLMFESCAEQFPILDTSVQFWYEFIDYI 1175
>Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical protein
ZK524.2d protein.
Length = 2155
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -2
Query: 460 MSMSKRCIFLCCAKSFPVSSQTVQVLYNFFSYL 362
M + + +F CA+ FP+ +VQ Y F Y+
Sbjct: 1482 MQQTYQLMFESCAEQFPILDTSVQFWYEFIDYI 1514
>Z73912-5|CAD56619.2| 1475|Caenorhabditis elegans Hypothetical
protein ZK524.2c protein.
Length = 1475
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -2
Query: 460 MSMSKRCIFLCCAKSFPVSSQTVQVLYNFFSYL 362
M + + +F CA+ FP+ +VQ Y F Y+
Sbjct: 802 MQQTYQLMFESCAEQFPILDTSVQFWYEFIDYI 834
>Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical protein
ZK524.2a protein.
Length = 1813
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -2
Query: 460 MSMSKRCIFLCCAKSFPVSSQTVQVLYNFFSYL 362
M + + +F CA+ FP+ +VQ Y F Y+
Sbjct: 1140 MQQTYQLMFESCAEQFPILDTSVQFWYEFIDYI 1172
>M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein.
Length = 1815
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -2
Query: 460 MSMSKRCIFLCCAKSFPVSSQTVQVLYNFFSYL 362
M + + +F CA+ FP+ +VQ Y F Y+
Sbjct: 1143 MQQTYQLMFESCAEQFPILDTSVQFWYEFIDYI 1175
>Z81568-10|CAB04600.1| 441|Caenorhabditis elegans Hypothetical
protein K08E3.8 protein.
Length = 441
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -1
Query: 761 SPGDVPRGAVPGGAH-ERHPQLXVGSTRPPQQLPMPG 654
+P VP+G PGGAH + HP L P+ P+ G
Sbjct: 59 TPQMVPQGGSPGGAHLQMHPHLQPQGQMQPRS-PLVG 94
>Z98877-17|CAB11571.1| 389|Caenorhabditis elegans Hypothetical
protein Y51A2D.17 protein.
Length = 389
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -1
Query: 599 GHQMCHLREPQIVTYADANL*SQKVERCDLIA 504
G + +R P+ V+Y +AN+ S K CDL+A
Sbjct: 157 GSSVFQMRTPKAVSYKEANIVSSK--ECDLVA 186
>U97005-9|AAK72085.1| 829|Caenorhabditis elegans Hypothetical
protein F19F10.9 protein.
Length = 829
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 465 NKITFKESEVLSAGDKITSFDFLGSKIGIGICYD 566
NK+ KE E A D+ +FD L ++G+ D
Sbjct: 150 NKMRQKEDEAKKAADRAAAFDQLDEELGVSAIVD 183
>AL021497-21|CAA16413.1| 389|Caenorhabditis elegans Hypothetical
protein Y51A2D.17 protein.
Length = 389
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -1
Query: 599 GHQMCHLREPQIVTYADANL*SQKVERCDLIA 504
G + +R P+ V+Y +AN+ S K CDL+A
Sbjct: 157 GSSVFQMRTPKAVSYKEANIVSSK--ECDLVA 186
>AF273823-1|AAG15172.1| 388|Caenorhabditis elegans nuclear receptor
NHR-70 protein.
Length = 388
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -1
Query: 599 GHQMCHLREPQIVTYADANL*SQKVERCDLIA 504
G + +R P+ V+Y +AN+ S K CDL+A
Sbjct: 156 GSSVFQMRTPKAVSYKEANIVSSK--ECDLVA 185
>AF273822-1|AAG15171.1| 387|Caenorhabditis elegans nuclear receptor
NHR-70 protein.
Length = 387
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -1
Query: 599 GHQMCHLREPQIVTYADANL*SQKVERCDLIA 504
G + +R P+ V+Y +AN+ S K CDL+A
Sbjct: 155 GSSVFQMRTPKAVSYKEANIVSSK--ECDLVA 184
>AF273821-1|AAG15170.1| 383|Caenorhabditis elegans nuclear receptor
NHR-70 protein.
Length = 383
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -1
Query: 599 GHQMCHLREPQIVTYADANL*SQKVERCDLIA 504
G + +R P+ V+Y +AN+ S K CDL+A
Sbjct: 151 GSSVFQMRTPKAVSYKEANIVSSK--ECDLVA 180
>Z81100-4|CAE11309.1| 333|Caenorhabditis elegans Hypothetical
protein K08G2.12 protein.
Length = 333
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -2
Query: 484 SLNVILLGMSMSKRCIFLCCAKSFPVSSQTVQVLYNFFSYLS 359
SL+V+L MS+ IF K PVS T ++ + FF +S
Sbjct: 203 SLSVLLFQMSLQFGLIFRQLLKHEPVSRNTQRLQHQFFIAMS 244
>Z81100-2|CAB03192.2| 332|Caenorhabditis elegans Hypothetical
protein K08G2.5 protein.
Length = 332
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -2
Query: 484 SLNVILLGMSMSKRCIFLCCAKSFPVSSQTVQVLYNFFSYLS 359
SL+V+L MS+ IF K PVS T ++ + FF +S
Sbjct: 202 SLSVLLFQMSLQFGLIFRQLLKHEPVSRNTQRLQHQFFIAMS 243
>Z75712-7|CAB00046.1| 208|Caenorhabditis elegans Hypothetical
protein K04G2.9 protein.
Length = 208
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/45 (26%), Positives = 19/45 (42%)
Frame = -2
Query: 772 SSECPQATYPAALSRAGLTSATHSXWSVARALPSSSQCRGPVVML 638
+++ P TY +R HS WS + C GP+ +L
Sbjct: 8 TTQQPDGTYVTTTTREKTKYKEHSVWSCGHGPTDKNYCLGPLGLL 52
>AF016442-3|AAB65917.2| 597|Caenorhabditis elegans Hypothetical
protein K12B6.2 protein.
Length = 597
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1
Query: 515 DLIARRENLGFFERYLVRNVYVEEMHLPVL 426
D + RREN+GF YLVR+ + L +L
Sbjct: 10 DEVRRRENIGFLTDYLVRSEVSDYYRLRLL 39
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,980,990
Number of Sequences: 27780
Number of extensions: 441816
Number of successful extensions: 1107
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1103
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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