Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_M05
         (833 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0628 + 9957385-9957888,9957985-9958111,9958541-9958608,995...    31   0.86 
08_01_1083 + 11096520-11096664,11097543-11097592,11097682-110977...    30   2.0  
05_02_0026 + 5716467-5716655,5716833-5718797                           29   3.5  
04_04_0468 - 25447774-25447945,25449016-25449130,25449541-254498...    29   4.6  
01_05_0108 + 18183250-18183336,18183451-18183962,18184074-181842...    28   8.0  

>03_02_0628 +
           9957385-9957888,9957985-9958111,9958541-9958608,
           9958695-9958772,9958885-9958949,9959130-9959196,
           9959344-9959526,9959690-9959746,9959857-9959952,
           9960061-9960219
          Length = 467

 Score = 31.5 bits (68), Expect = 0.86
 Identities = 21/78 (26%), Positives = 42/78 (53%)
 Frame = +1

Query: 151 NESVKLSAVKNKYHKGVKAYTDERWTECIAQFEESISLYRVYRKRIINCRLKCNRNQYNS 330
           N  ++LS   N   K V    DE+  ECIAQ EE+ +L R   K + + +    + +Y  
Sbjct: 245 NMRMELSDKFNNAIKDVSVKLDEQKNECIAQLEEN-NLLRSKLKDLAD-QYNITQQKYAH 302

Query: 331 EIQNNIEDLKIYELLLKK 384
           +++  + +L++ +L +++
Sbjct: 303 QLKEKMLELELADLKMQQ 320


>08_01_1083 +
           11096520-11096664,11097543-11097592,11097682-11097754,
           11099122-11099201,11099354-11099505,11100653-11100812,
           11100886-11100933,11101118-11101198,11101517-11101597
          Length = 289

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = +1

Query: 331 EIQNNIEDLKIYELLLKKTVCLKQCIESVADTHLQEEFQDIIPIMSARKPFEYL 492
           +I NN+    +  +LL   +C     + VA T+  E +QDI P  S  + ++ L
Sbjct: 182 QINNNLLKYSVRGILLNAGICQLCRGDVVAITNSMERYQDIDPTFSGTREYKLL 235


>05_02_0026 + 5716467-5716655,5716833-5718797
          Length = 717

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
 Frame = +1

Query: 673 KNGKDAYNKN---DWEKTITNFEEAIKDYFSVENNCRAECE 786
           K+G D ++K+   +W+K   +F   +    S+ NN R  CE
Sbjct: 69  KSGSDVFSKSGFQNWKKASESFAGHVGGVNSIHNNARRRCE 109


>04_04_0468 -
           25447774-25447945,25449016-25449130,25449541-25449877,
           25450299-25450628,25451090-25451362,25451471-25451929,
           25452307-25452516,25452617-25452828,25453304-25453404,
           25453584-25454008,25454167-25454360,25454436-25454701,
           25454809-25455015,25455121-25455281,25455741-25455933,
           25456158-25456251,25457238-25457373,25458074-25458202,
           25458315-25458449,25458549-25458613,25459875-25459950,
           25460775-25460885,25461194-25461371,25462340-25462434
          Length = 1557

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +1

Query: 667 YYKNGKDAYNKNDWEKTITNFEE 735
           YY NGK++ +  +WE  +  FEE
Sbjct: 107 YYGNGKNSRDHQEWENDMREFEE 129


>01_05_0108 +
           18183250-18183336,18183451-18183962,18184074-18184245,
           18184984-18185022,18185117-18185185,18185281-18185397,
           18185842-18186056,18187085-18187240,18187328-18187527,
           18187927-18188084,18188321-18188417,18188738-18188829,
           18189018-18189191
          Length = 695

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
 Frame = +1

Query: 622 DVNEIEDLLIENFMIYYKNGKDAYNKNDWEKTITNFEEAIKD---YFSVENNCRAECELQ 792
           ++ E+  L  E  ++ + N +    K  +++T+TNF   IKD   Y  + N    EC  +
Sbjct: 294 EMEELMSLSPEKILLRWMNFQ--LKKGGFQRTVTNFSSDIKDSEAYACLLNVLAPECSAK 351

Query: 793 P 795
           P
Sbjct: 352 P 352


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,516,136
Number of Sequences: 37544
Number of extensions: 303358
Number of successful extensions: 665
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 665
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2303447664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)