Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_M02
(816 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73973-3|CAA98265.1| 468|Caenorhabditis elegans Hypothetical pr... 147 7e-36
Z73973-4|CAE54908.1| 367|Caenorhabditis elegans Hypothetical pr... 113 2e-25
Z46343-1|CAA86456.2| 356|Caenorhabditis elegans Hypothetical pr... 107 1e-23
U00051-13|AAA91358.1| 491|Caenorhabditis elegans Hypothetical p... 97 1e-20
AC026301-13|AAP13737.1| 766|Caenorhabditis elegans Hypothetical... 76 4e-14
Z81525-9|CAB04260.1| 242|Caenorhabditis elegans Hypothetical pr... 62 5e-10
AL031264-1|CAA20326.1| 242|Caenorhabditis elegans Hypothetical ... 62 5e-10
U00051-14|AAM29692.1| 469|Caenorhabditis elegans Hypothetical p... 50 3e-06
U29515-1|AAC06328.1| 449|Caenorhabditis elegans fem-2 protein. 42 4e-04
U28412-8|AAC46598.1| 449|Caenorhabditis elegans Feminization of... 42 4e-04
Z79598-7|CAB01866.1| 386|Caenorhabditis elegans Hypothetical pr... 33 0.18
AF145375-1|AAD39814.1| 386|Caenorhabditis elegans TAB1-like pro... 33 0.18
Z73912-8|CAA98148.1| 1016|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z72517-7|CAA96698.1| 1016|Caenorhabditis elegans Hypothetical pr... 31 1.3
U39653-4|AAL56624.1| 649|Caenorhabditis elegans Prion-like-(q/n... 29 4.0
Z82260-2|CAB05130.1| 344|Caenorhabditis elegans Hypothetical pr... 29 5.3
AC006834-5|AAF40007.1| 451|Caenorhabditis elegans Hypothetical ... 29 5.3
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ... 28 9.2
AC084197-33|AAN63423.2| 352|Caenorhabditis elegans Him-three pa... 28 9.2
AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical ... 28 9.2
>Z73973-3|CAA98265.1| 468|Caenorhabditis elegans Hypothetical
protein F25D1.1a protein.
Length = 468
Score = 147 bits (357), Expect = 7e-36
Identities = 83/179 (46%), Positives = 110/179 (61%), Gaps = 19/179 (10%)
Frame = +2
Query: 335 SMGAFLNKPETKKYNESGEGNGLRYGVASMQGWRVEMEDAHHAQ--LTLNGTLSDWSYFA 508
+MGAFL+KP+T K N GEGNG+RYG++SMQGWR+ MED+H A+ ++ + DWS+FA
Sbjct: 83 TMGAFLDKPKTDKTNVHGEGNGIRYGMSSMQGWRICMEDSHIAEAIMSQSSPYKDWSFFA 142
Query: 509 VFDGHAGARVSAHCAENLLECILQTEEFRR-----ED------------IAEAIRTGFLD 637
VFDGHAG ++ + LLE ++ +EEFR E+ + + I+ GFL
Sbjct: 143 VFDGHAGHHIANRASSQLLEHLISSEEFREMTKTLEENNGVLTDSTLKLLEKGIKKGFLS 202
Query: 638 LDKKMSELPELSNGKEKSGSTAVCAFVSPEQIYIANCGDSRAVLARGGIPIFATRXHKP 814
D E+ + SN KSG TAVCA V+P I N GDSRAV+A G IF T HKP
Sbjct: 203 FD----EISKTSNDISKSGCTAVCAIVTPTHFIIGNLGDSRAVVA-GKNEIFGTEDHKP 256
>Z73973-4|CAE54908.1| 367|Caenorhabditis elegans Hypothetical
protein F25D1.1b protein.
Length = 367
Score = 113 bits (271), Expect = 2e-25
Identities = 67/155 (43%), Positives = 90/155 (58%), Gaps = 19/155 (12%)
Frame = +2
Query: 407 YGVASMQGWRVEMEDAHHAQ--LTLNGTLSDWSYFAVFDGHAGARVSAHCAENLLECILQ 580
YG++SMQGWR+ MED+H A+ ++ + DWS+FAVFDGHAG ++ + LLE ++
Sbjct: 6 YGMSSMQGWRICMEDSHIAEAIMSQSSPYKDWSFFAVFDGHAGHHIANRASSQLLEHLIS 65
Query: 581 TEEFRR-----ED------------IAEAIRTGFLDLDKKMSELPELSNGKEKSGSTAVC 709
+EEFR E+ + + I+ GFL D E+ + SN KSG TAVC
Sbjct: 66 SEEFREMTKTLEENNGVLTDSTLKLLEKGIKKGFLSFD----EISKTSNDISKSGCTAVC 121
Query: 710 AFVSPEQIYIANCGDSRAVLARGGIPIFATRXHKP 814
A V+P I N GDSRAV+A G IF T HKP
Sbjct: 122 AIVTPTHFIIGNLGDSRAVVA-GKNEIFGTEDHKP 155
>Z46343-1|CAA86456.2| 356|Caenorhabditis elegans Hypothetical
protein T23F11.1 protein.
Length = 356
Score = 107 bits (256), Expect = 1e-23
Identities = 62/159 (38%), Positives = 90/159 (56%)
Frame = +2
Query: 338 MGAFLNKPETKKYNESGEGNGLRYGVASMQGWRVEMEDAHHAQLTLNGTLSDWSYFAVFD 517
MG L++P TKK + S G + MQGWRV+MEDAH L+L ++FAV+D
Sbjct: 1 MGQTLSEPVTKKESASCANENYLVGSSCMQGWRVDMEDAHTHLLSLPDD-PKCAFFAVYD 59
Query: 518 GHAGARVSAHCAENLLECILQTEEFRREDIAEAIRTGFLDLDKKMSELPELSNGKEKSGS 697
GH G++VS + NL + ++ +EF ++ EAI GFL+LD++M E + + SG+
Sbjct: 60 GHGGSKVSQYSGINLHKKVVAQKEFSEGNMKEAIEKGFLELDQQMRVDEETKD--DVSGT 117
Query: 698 TAVCAFVSPEQIYIANCGDSRAVLARGGIPIFATRXHKP 814
TAV + +Y N GDSRAV + G + HKP
Sbjct: 118 TAVVVLIKEGDVYCGNAGDSRAVSSVVGEARPLSFDHKP 156
>U00051-13|AAA91358.1| 491|Caenorhabditis elegans Hypothetical
protein F42G9.1a protein.
Length = 491
Score = 97.1 bits (231), Expect = 1e-20
Identities = 51/130 (39%), Positives = 76/130 (58%), Gaps = 8/130 (6%)
Frame = +2
Query: 338 MGAFLNKPETKKYNESGEGNGLRYGVASMQGWRVEMEDAHHAQLTLNGTLSDWSYFAVFD 517
MGA+LNKP +K E G GNGL Y +MQGWRV EDAH+ + L+ +DW F V+D
Sbjct: 1 MGAYLNKPIIEKEKEEGSGNGLSYACTTMQGWRVNQEDAHNCVVDLH---TDWHMFGVYD 57
Query: 518 GHAGARVSAHCAENLLECILQTEEFRREDIAEAIRTGFLDLD------KKMSELPELSN- 676
GH G VS + L + + + + + +D+AE ++ F+D D + M EL ++ +
Sbjct: 58 GHGGTEVSKFTSAKLPDFLKERKFWEADDVAECLQKAFVDFDDFIRAEESMKELKDIGDE 117
Query: 677 GK-EKSGSTA 703
GK +K+G A
Sbjct: 118 GKPKKAGGEA 127
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/44 (45%), Positives = 27/44 (61%)
Frame = +2
Query: 683 EKSGSTAVCAFVSPEQIYIANCGDSRAVLARGGIPIFATRXHKP 814
E SG+TA V +++ +AN GDSRAVL R G + + HKP
Sbjct: 313 EDSGTTACVCLVGKDKVIVANAGDSRAVLCRNGKAVDLSVDHKP 356
>AC026301-13|AAP13737.1| 766|Caenorhabditis elegans Hypothetical
protein Y54F10BM.1 protein.
Length = 766
Score = 75.8 bits (178), Expect = 4e-14
Identities = 50/136 (36%), Positives = 70/136 (51%), Gaps = 10/136 (7%)
Frame = +2
Query: 392 GNGLRYGVASMQGWRVEMED--AHHAQLTLNGTLSDWSYFAVFDGHAGARVSAHCAENLL 565
G +R VA+ QG R MED H + NG L DW++ VFDGH G S + +LL
Sbjct: 16 GENMRITVAASQGGRRYMEDRCVIHTERINNGLL-DWTFVGVFDGHGGEHASEYVRRHLL 74
Query: 566 ECILQTEEFRR---EDIAEAIRTGFLDLDKKM----SELPELSNG-KEKSGSTAVCAFVS 721
I + ++F EDI EAIR GFL ++M E P ++G +G+T C F+
Sbjct: 75 MNITKNQKFESNSDEDILEAIRQGFLMTHEQMRHVYDEWPYTASGYPSTAGTTVSCVFIR 134
Query: 722 PEQIYIANCGDSRAVL 769
++Y + GDS L
Sbjct: 135 NGKLYTGHVGDSAIFL 150
>Z81525-9|CAB04260.1| 242|Caenorhabditis elegans Hypothetical
protein F33A8.6 protein.
Length = 242
Score = 62.1 bits (144), Expect = 5e-10
Identities = 46/152 (30%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Frame = +2
Query: 353 NKPETKKYNESGEGNGLRYGVASMQGWRVEMEDAHHAQLTLN-GT----LSDWSYFAVFD 517
N E+KK ES +G R +M+D H + GT LS S+FA+FD
Sbjct: 16 NSDESKKPKESRNLYCTLAAYGCRKGERADMQDTHIMLPKFDLGTEKSFLSRASFFAIFD 75
Query: 518 GHAGARVSAHC----AENLLECILQTEEF--RREDIAEAIRTGFLDLDKKMSELPELSNG 679
GHAG R + HC + + E + + +F + + + + +D + + +
Sbjct: 76 GHAGPRAAEHCQSQMGKTVKEKLAKFSDFPTLTKSLKQTFTESYKAVDDGFLAIAKQNKP 135
Query: 680 KEKSGSTAVCAFVSPEQIYIANCGDSRAVLAR 775
K G+TA + IY+AN GDSRAV+AR
Sbjct: 136 IWKDGTTATTMIILNNVIYVANIGDSRAVVAR 167
>AL031264-1|CAA20326.1| 242|Caenorhabditis elegans Hypothetical
protein F33A8.6 protein.
Length = 242
Score = 62.1 bits (144), Expect = 5e-10
Identities = 46/152 (30%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Frame = +2
Query: 353 NKPETKKYNESGEGNGLRYGVASMQGWRVEMEDAHHAQLTLN-GT----LSDWSYFAVFD 517
N E+KK ES +G R +M+D H + GT LS S+FA+FD
Sbjct: 16 NSDESKKPKESRNLYCTLAAYGCRKGERADMQDTHIMLPKFDLGTEKSFLSRASFFAIFD 75
Query: 518 GHAGARVSAHC----AENLLECILQTEEF--RREDIAEAIRTGFLDLDKKMSELPELSNG 679
GHAG R + HC + + E + + +F + + + + +D + + +
Sbjct: 76 GHAGPRAAEHCQSQMGKTVKEKLAKFSDFPTLTKSLKQTFTESYKAVDDGFLAIAKQNKP 135
Query: 680 KEKSGSTAVCAFVSPEQIYIANCGDSRAVLAR 775
K G+TA + IY+AN GDSRAV+AR
Sbjct: 136 IWKDGTTATTMIILNNVIYVANIGDSRAVVAR 167
>U00051-14|AAM29692.1| 469|Caenorhabditis elegans Hypothetical
protein F42G9.1b protein.
Length = 469
Score = 49.6 bits (113), Expect = 3e-06
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 8/94 (8%)
Frame = +2
Query: 446 EDAHHAQLTLNGTLSDWSYFAVFDGHAGARVSAHCAENLLECILQTEEFRREDIAEAIRT 625
+DAH+ + L+ +DW F V+DGH G VS + L + + + + + +D+AE ++
Sbjct: 15 QDAHNCVVDLH---TDWHMFGVYDGHGGTEVSKFTSAKLPDFLKERKFWEADDVAECLQK 71
Query: 626 GFLDLD------KKMSELPELSN-GK-EKSGSTA 703
F+D D + M EL ++ + GK +K+G A
Sbjct: 72 AFVDFDDFIRAEESMKELKDIGDEGKPKKAGGEA 105
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/44 (45%), Positives = 27/44 (61%)
Frame = +2
Query: 683 EKSGSTAVCAFVSPEQIYIANCGDSRAVLARGGIPIFATRXHKP 814
E SG+TA V +++ +AN GDSRAVL R G + + HKP
Sbjct: 291 EDSGTTACVCLVGKDKVIVANAGDSRAVLCRNGKAVDLSVDHKP 334
>U29515-1|AAC06328.1| 449|Caenorhabditis elegans fem-2 protein.
Length = 449
Score = 42.3 bits (95), Expect = 4e-04
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 6/112 (5%)
Frame = +2
Query: 497 SYFAVFDGHAGARVSAHCAENLLECILQTEEFR--REDIAEAIRTGFLDLDKKMSELPEL 670
S AVFDGH G S + A +L E L+ + R + + + +R LD++M+ +
Sbjct: 196 SVLAVFDGHGGHECSQYAAGHLWETWLEVRKSRDPSDSLEDQLRKSLELLDERMT----V 251
Query: 671 SNGKE--KSGSTAVCAFVSPEQ--IYIANCGDSRAVLARGGIPIFATRXHKP 814
+ KE K GSTAVC + +Q + +A GDS + TR H P
Sbjct: 252 RSVKECWKGGSTAVCCAIDMDQKLMALAWLGDSPGYVMSNIEFRQLTRGHSP 303
>U28412-8|AAC46598.1| 449|Caenorhabditis elegans Feminization of xx
and xo animalsprotein 2 protein.
Length = 449
Score = 42.3 bits (95), Expect = 4e-04
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 6/112 (5%)
Frame = +2
Query: 497 SYFAVFDGHAGARVSAHCAENLLECILQTEEFR--REDIAEAIRTGFLDLDKKMSELPEL 670
S AVFDGH G S + A +L E L+ + R + + + +R LD++M+ +
Sbjct: 196 SVLAVFDGHGGHECSQYAAGHLWETWLEVRKSRDPSDSLEDQLRKSLELLDERMT----V 251
Query: 671 SNGKE--KSGSTAVCAFVSPEQ--IYIANCGDSRAVLARGGIPIFATRXHKP 814
+ KE K GSTAVC + +Q + +A GDS + TR H P
Sbjct: 252 RSVKECWKGGSTAVCCAIDMDQKLMALAWLGDSPGYVMSNIEFRQLTRGHSP 303
>Z79598-7|CAB01866.1| 386|Caenorhabditis elegans Hypothetical
protein C44H4.5 protein.
Length = 386
Score = 33.5 bits (73), Expect = 0.18
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 13/74 (17%)
Frame = +2
Query: 584 EEFRR--EDIAEA-IRTGFLDLDKKMSELPELS----------NGKEKSGSTAVCAFVSP 724
EEF+R E++AE + DL+ ++ +L E S N K + G+TA+ +
Sbjct: 94 EEFKRKFENVAERYLLMNTDDLNNRLLKLEEQSETGNNAVSEINQKIRQGTTAIVVMIIN 153
Query: 725 EQIYIANCGDSRAV 766
+ +Y+ NCG+S A+
Sbjct: 154 QDLYVLNCGNSLAI 167
>AF145375-1|AAD39814.1| 386|Caenorhabditis elegans TAB1-like
protein TAP-1 protein.
Length = 386
Score = 33.5 bits (73), Expect = 0.18
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 13/74 (17%)
Frame = +2
Query: 584 EEFRR--EDIAEA-IRTGFLDLDKKMSELPELS----------NGKEKSGSTAVCAFVSP 724
EEF+R E++AE + DL+ ++ +L E S N K + G+TA+ +
Sbjct: 94 EEFKRKFENVAERYLLMNTDDLNNRLLKLEEQSETGNNAVSEINQKIRQGTTAIVVMIIN 153
Query: 725 EQIYIANCGDSRAV 766
+ +Y+ NCG+S A+
Sbjct: 154 QDLYVLNCGNSLAI 167
>Z73912-8|CAA98148.1| 1016|Caenorhabditis elegans Hypothetical protein
ZK524.4 protein.
Length = 1016
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = -2
Query: 746 SSRCISVREKRKHTRPSNQTSLYRWTAREARSFFYLNPGNQYGLLQLCLHAETP 585
S C S+R++ HT S QT + +WT ++ +Y P Y + LH +TP
Sbjct: 886 SPDCASIRDRILHTSLSTQTMIRKWTEMDS---WYGTPPRDYE-DRTHLHEKTP 935
>Z72517-7|CAA96698.1| 1016|Caenorhabditis elegans Hypothetical protein
ZK524.4 protein.
Length = 1016
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = -2
Query: 746 SSRCISVREKRKHTRPSNQTSLYRWTAREARSFFYLNPGNQYGLLQLCLHAETP 585
S C S+R++ HT S QT + +WT ++ +Y P Y + LH +TP
Sbjct: 886 SPDCASIRDRILHTSLSTQTMIRKWTEMDS---WYGTPPRDYE-DRTHLHEKTP 935
>U39653-4|AAL56624.1| 649|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 65,
isoform b protein.
Length = 649
Score = 29.1 bits (62), Expect = 4.0
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Frame = -2
Query: 785 EYRRGPVQRENRRSSRCISVREKRKHTRPSNQTSLYRWTAREARSFF--YLNPGNQ-YGL 615
EY +Q +NR ++ + + KR R TA EA++ F YLN Q +G
Sbjct: 279 EYANARIQ-QNRNRTQSLCSQPKRSSRRVQGFIDPTNLTAEEAQAMFYTYLNYTQQDFGK 337
Query: 614 LQLCLHAETPPSAEYIQEDFLHSVRRPELP 525
+ LH+E ++ + SV LP
Sbjct: 338 IGNLLHSEHKQLQPFLNKLHTSSVPLHRLP 367
>Z82260-2|CAB05130.1| 344|Caenorhabditis elegans Hypothetical
protein C32H11.3 protein.
Length = 344
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 431 WRVEMEDAHHAQLTLNGTLSD-WSYFAVFDGHAGARVSAH 547
W V + + ++A+L +NG + D +S+F D S+H
Sbjct: 60 WIVTIPEGYYARLIINGKMGDPYSHFLTIDSAGNLITSSH 99
>AC006834-5|AAF40007.1| 451|Caenorhabditis elegans Hypothetical
protein ZK973.3 protein.
Length = 451
Score = 28.7 bits (61), Expect = 5.3
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 503 FAVFDGHAGARVSAHCAENL 562
F VFDGH G + S H + NL
Sbjct: 70 FGVFDGHGGQQCSRHISTNL 89
Score = 28.7 bits (61), Expect = 5.3
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 9/64 (14%)
Frame = +2
Query: 605 IAEAIRTGFLDLDKKMSE--LPELSNGKEK-------SGSTAVCAFVSPEQIYIANCGDS 757
+ EA++ F DK ++E LP ++ SGS A + +++AN GD+
Sbjct: 153 VREALKLAFETCDKDLAENALPSAKGVIDRHAAMVAASGSCCTLAHIRSRHLHVANLGDA 212
Query: 758 RAVL 769
AVL
Sbjct: 213 AAVL 216
>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
protein Y79H2A.3a protein.
Length = 2129
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = -3
Query: 802 SCGKNRNTAAGQYSARIAAVRDV 734
S +NR AAG +S+++A VRD+
Sbjct: 1602 SSAQNRAAAAGDFSSKLATVRDL 1624
>AC084197-33|AAN63423.2| 352|Caenorhabditis elegans Him-three
paralog protein 2 protein.
Length = 352
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 416 ASMQGWRVEMEDAHHAQLTLNGTLSDWSYFAVFD 517
A MQ W M D++ A+LTL G L S F+
Sbjct: 242 AHMQCWSKSMSDSYAAELTLKGHLDKVSDMYAFN 275
>AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical
protein C51G7.3 protein.
Length = 754
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = -3
Query: 802 SCGKNRNTAAGQYSARIAAVRDV 734
S +NR AAG +S+++A VRD+
Sbjct: 227 SSAQNRAAAAGDFSSKLATVRDL 249
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,121,990
Number of Sequences: 27780
Number of extensions: 336817
Number of successful extensions: 1032
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1019
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -