Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_L24
         (656 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    25   0.72 
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   5.1  
AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan oxyge...    22   5.1  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    22   5.1  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    22   5.1  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   6.7  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   8.9  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 24.6 bits (51), Expect = 0.72
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 472 VKDTKRLCFLFYCFNG 519
           +K TKR C+ +Y F G
Sbjct: 107 IKKTKRYCYYYYAFFG 122


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = -1

Query: 383 IVNRFNRRPICDACSKSLKRFSAFAATPESMFREMGS 273
           I+ RFN   +C+   + +K  +     PE+ F ++ S
Sbjct: 239 IIARFNIERLCNGLKRVVKLSNWREPLPEAYFPKLDS 275


>AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 76

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +3

Query: 369 EPIHDKHLSLAT 404
           +P+HD+HL + T
Sbjct: 46  QPVHDEHLFIVT 57


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +3

Query: 369 EPIHDKHLSLAT 404
           +P+HD+HL + T
Sbjct: 46  QPVHDEHLFIVT 57


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +3

Query: 369 EPIHDKHLSLAT 404
           +P+HD+HL + T
Sbjct: 46  QPVHDEHLFIVT 57


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +2

Query: 134 YEYVLSFMLNIIIFI*FDTNSLIYYVTT 217
           YE+  +F ++ I+F  F+T   I  + T
Sbjct: 250 YEFNANFTISYILFALFNTFGTILLIMT 277


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = -2

Query: 640 WGGGAVVS 617
           WGGGA+VS
Sbjct: 323 WGGGALVS 330


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,736
Number of Sequences: 336
Number of extensions: 3109
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)