Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_L15
         (339 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    25   0.21 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   2.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   2.6  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    20   8.0  

>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 25.0 bits (52), Expect = 0.21
 Identities = 13/44 (29%), Positives = 18/44 (40%)
 Frame = -3

Query: 172 FDTFSXLSFRRCIPALYSVVPDSQFFSACLPREQXHCRAVIEVL 41
           FD    +    CI   Y+ V    FF  CL + +  C  V + L
Sbjct: 164 FDLVYFILAFACISIAYTNVSTDAFFYTCLIQIETQCEIVSDTL 207


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 151 SFRRCIPALYSVVPDSQFFSACLPREQ 71
           S ++C  A Y +   +Q+   C PREQ
Sbjct: 570 SMKKC-RARYGLDQQNQWCKPCRPREQ 595


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 151 SFRRCIPALYSVVPDSQFFSACLPREQ 71
           S ++C  A Y +   +Q+   C PREQ
Sbjct: 462 SMKKC-RARYGLDQQNQWCKPCRPREQ 487


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 238 VYF*LFLPVYV 206
           V+F  FLPVYV
Sbjct: 168 VFFKRFLPVYV 178


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,851
Number of Sequences: 336
Number of extensions: 942
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6558670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)