Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_L15
(339 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC106036-1|AAI06037.1| 87|Homo sapiens coiled-coil-helix-coile... 54 1e-07
AF242180-1|AAF60345.1| 96|Homo sapiens E2IG2 protein. 54 1e-07
D25216-1|BAA04946.2| 513|Homo sapiens KIAA0014 protein. 30 2.1
BC011377-1|AAH11377.1| 493|Homo sapiens LRRC14 protein protein. 30 2.1
AF051166-1|AAD02582.1| 128|Homo sapiens immunoglobulin heavy ch... 29 4.8
AF051165-1|AAD02581.1| 128|Homo sapiens immunoglobulin heavy ch... 29 4.8
U77538-1|AAB36747.1| 126|Homo sapiens immunoglobulin variable r... 28 6.4
AF184765-1|AAF03882.1| 248|Homo sapiens IgG2 heavy chain protein. 28 8.5
AF184764-1|AAF03881.1| 251|Homo sapiens IgG1 heavy chain protein. 28 8.5
AF184762-1|AAF03879.1| 157|Homo sapiens IgA1 heavy chain protein. 28 8.5
>BC106036-1|AAI06037.1| 87|Homo sapiens
coiled-coil-helix-coiled-coil-helix domain containing 8
protein.
Length = 87
Score = 54.0 bits (124), Expect = 1e-07
Identities = 20/57 (35%), Positives = 38/57 (66%), Gaps = 3/57 (5%)
Frame = +1
Query: 76 PVEGMLKKTGCLELHYKVQECIAETKXWRKCQTAVNNFRDCINK---HKQEETTKNK 237
P++ ++ ++GC H+ VQEC+A+ + WR+CQ V F+DC+++ +QEE + +
Sbjct: 24 PLDQLISRSGCAASHFAVQECMAQHQDWRQCQPQVQAFKDCMSEQQARRQEELQRRQ 80
>AF242180-1|AAF60345.1| 96|Homo sapiens E2IG2 protein.
Length = 96
Score = 54.0 bits (124), Expect = 1e-07
Identities = 20/57 (35%), Positives = 38/57 (66%), Gaps = 3/57 (5%)
Frame = +1
Query: 76 PVEGMLKKTGCLELHYKVQECIAETKXWRKCQTAVNNFRDCINK---HKQEETTKNK 237
P++ ++ ++GC H+ VQEC+A+ + WR+CQ V F+DC+++ +QEE + +
Sbjct: 33 PLDQLISRSGCAASHFAVQECMAQHQDWRQCQPQVQAFKDCMSEQQARRQEELQRRQ 89
>D25216-1|BAA04946.2| 513|Homo sapiens KIAA0014 protein.
Length = 513
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 28 KNLPLKPRSQLGSXAAPVEGMLKKTGCLELHYKVQEC-IAETK 153
K L L GS AP +G+L+ + LH ++ EC +A+T+
Sbjct: 359 KKLDLSGNDLSGSQLAPFQGLLQASAATLLHLELTECQLADTQ 401
>BC011377-1|AAH11377.1| 493|Homo sapiens LRRC14 protein protein.
Length = 493
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 28 KNLPLKPRSQLGSXAAPVEGMLKKTGCLELHYKVQEC-IAETK 153
K L L GS AP +G+L+ + LH ++ EC +A+T+
Sbjct: 339 KKLDLSGNDLSGSQLAPFQGLLQASAATLLHLELTECQLADTQ 381
>AF051166-1|AAD02582.1| 128|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 128
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 15 TSFLQKSASKTSITARQXCCSRGRHAEKNWLSGT 116
T++LQ ++ +TS + C R RH N SGT
Sbjct: 78 TAYLQWTSLRTSDSGMYYCTRRARHCGTNTCSGT 111
>AF051165-1|AAD02581.1| 128|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 128
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 15 TSFLQKSASKTSITARQXCCSRGRHAEKNWLSGT 116
T++LQ ++ +TS + C R RH N SGT
Sbjct: 78 TAYLQWTSLRTSDSGMYYCTRRARHCGTNTCSGT 111
>U77538-1|AAB36747.1| 126|Homo sapiens immunoglobulin variable
region protein.
Length = 126
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 15 TSFLQKSASKTSITARQXCCSRGRHAEKNWL 107
T++LQ S+ K S TA C +GR WL
Sbjct: 78 TAYLQWSSLKASDTAMYYCARQGRLGGSGWL 108
>AF184765-1|AAF03882.1| 248|Homo sapiens IgG2 heavy chain protein.
Length = 248
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 15 TSFLQKSASKTSITARQXCCSRGRHAEKNWLSGT 116
T+FLQ ++ K+ TA C RG + W GT
Sbjct: 99 TAFLQMNSLKSDDTAMYYCVIRGDVYNRQWGQGT 132
>AF184764-1|AAF03881.1| 251|Homo sapiens IgG1 heavy chain protein.
Length = 251
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 15 TSFLQKSASKTSITARQXCCSRGRHAEKNWLSGT 116
T+FLQ ++ K+ TA C RG + W GT
Sbjct: 99 TAFLQMNSLKSDDTAMYYCVIRGDVYNRQWGQGT 132
>AF184762-1|AAF03879.1| 157|Homo sapiens IgA1 heavy chain protein.
Length = 157
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 15 TSFLQKSASKTSITARQXCCSRGRHAEKNWLSGT 116
T+FLQ ++ K+ TA C RG + W GT
Sbjct: 99 TAFLQMNSLKSDDTAMYYCVIRGDVYNRQWGQGT 132
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,596,132
Number of Sequences: 237096
Number of extensions: 535003
Number of successful extensions: 1065
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1065
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1852524224
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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