Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_L13
(762 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 30 0.41
SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large subunit|... 30 0.41
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 29 0.72
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 29 0.72
SPAC11E3.13c |||1,3-beta-glucanosyltransferase |Schizosaccharomy... 29 0.96
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 1.7
SPBC409.07c |wis1|spc2, smf2|MAP kinase kinase Wis1|Schizosaccha... 27 2.2
SPCC1259.06 |||transcription factor TFIID complex subunit 8 |Sch... 27 2.9
SPAC222.09 |seb1||RNA-binding protein Seb1 |Schizosaccharomyces ... 27 3.9
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 27 3.9
SPBC215.10 |||haloacid dehalogenase-like hydrolase|Schizosacchar... 26 5.1
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 26 5.1
SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme Fub2|Schiz... 26 5.1
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 26 6.7
SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase Ppk30|Schizos... 25 8.9
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 25 8.9
SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|c... 25 8.9
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 25 8.9
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.9 bits (64), Expect = 0.41
Identities = 25/59 (42%), Positives = 27/59 (45%)
Frame = -1
Query: 645 IPLKPMD*CAPSVMPTPRSWAPTTSTSRAYCVLDSPRPPSSPGTCSPNAPRSHSPATVP 469
IPL P AP P PRS AP ST R L S R S+P P P +PA P
Sbjct: 351 IPLPPQGRSAPPP-PPPRS-AP--STGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPP 405
>SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1752
Score = 29.9 bits (64), Expect = 0.41
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Frame = -1
Query: 618 APSVMPTPRSWAPT----TSTSRAYCVLDSPRPPSSPGTCSPNAPRSHSPATVPS 466
+PS PT S++PT ++TS +Y P+SP + SP +P S+SP T PS
Sbjct: 1589 SPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSP-SYSPTSP-SYSP-TSPS 1640
Score = 29.1 bits (62), Expect = 0.72
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Frame = -1
Query: 618 APSVMPTPRSWAPT----TSTSRAYCVLDSPRPPSSPGTCSPNAPRSHSPATVPS 466
+PS PT S++PT + TS +Y P+SP + SP +P S+SP T PS
Sbjct: 1610 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSPTSP-SYSP-TSPS 1661
Score = 29.1 bits (62), Expect = 0.72
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Frame = -1
Query: 618 APSVMPTPRSWAPT----TSTSRAYCVLDSPRPPSSPGTCSPNAPRSHSPATVPS 466
+PS PT S++PT + TS +Y P+SP + SP +P S+SP T PS
Sbjct: 1624 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSPTSP-SYSP-TSPS 1675
Score = 29.1 bits (62), Expect = 0.72
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Frame = -1
Query: 618 APSVMPTPRSWAPT----TSTSRAYCVLDSPRPPSSPGTCSPNAPRSHSPATVPS 466
+PS PT S++PT + TS +Y P+SP + SP +P S+SP T PS
Sbjct: 1638 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSPTSP-SYSP-TSPS 1689
Score = 29.1 bits (62), Expect = 0.72
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Frame = -1
Query: 618 APSVMPTPRSWAPT----TSTSRAYCVLDSPRPPSSPGTCSPNAPRSHSPATVPS 466
+PS PT S++PT + TS +Y P+SP + SP +P S+SP T PS
Sbjct: 1652 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSPTSP-SYSP-TSPS 1703
Score = 29.1 bits (62), Expect = 0.72
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Frame = -1
Query: 618 APSVMPTPRSWAPT----TSTSRAYCVLDSPRPPSSPGTCSPNAPRSHSPATVPS 466
+PS PT S++PT + TS +Y P+SP + SP +P S+SP T PS
Sbjct: 1666 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSPTSP-SYSP-TSPS 1717
Score = 29.1 bits (62), Expect = 0.72
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Frame = -1
Query: 618 APSVMPTPRSWAPT----TSTSRAYCVLDSPRPPSSPGTCSPNAPRSHSPATVPS 466
+PS PT S++PT + TS +Y P+SP + SP +P S+SP T PS
Sbjct: 1680 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSPTSP-SYSP-TSPS 1731
Score = 29.1 bits (62), Expect = 0.72
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Frame = -1
Query: 618 APSVMPTPRSWAPT----TSTSRAYCVLDSPRPPSSPGTCSPNAPRSHSPATVPS 466
+PS PT S++PT + TS +Y P+SP + SP +P S+SP T PS
Sbjct: 1694 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSPTSP-SYSP-TSPS 1745
Score = 27.9 bits (59), Expect = 1.7
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = -1
Query: 618 APSVMPTPRSWAPTTSTSRAYCVLDSPRPPSSPGTC---SPNAPRSHSPATVPS 466
+PS PT S++PT+ + SP PS T SP +P S+SP T PS
Sbjct: 1575 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSP-SYSP-TSPS 1626
Score = 27.9 bits (59), Expect = 1.7
Identities = 21/51 (41%), Positives = 29/51 (56%)
Frame = -1
Query: 618 APSVMPTPRSWAPTTSTSRAYCVLDSPRPPSSPGTCSPNAPRSHSPATVPS 466
+PS PT S++P TS +Y P+SP + SP +P S+SP T PS
Sbjct: 1708 SPSYSPTSPSYSP---TSPSYSPTSPSYSPTSP-SYSPTSP-SYSP-TSPS 1752
Score = 26.6 bits (56), Expect = 3.9
Identities = 22/59 (37%), Positives = 32/59 (54%)
Frame = -1
Query: 642 PLKPMD*CAPSVMPTPRSWAPTTSTSRAYCVLDSPRPPSSPGTCSPNAPRSHSPATVPS 466
P P +P+ MP+ S++P TS +Y P+SP + SP +P S+S AT PS
Sbjct: 1560 PSSPGYSTSPAYMPSSPSYSP---TSPSYSPTSPSYSPTSP-SYSPTSP-SYS-ATSPS 1612
Score = 25.8 bits (54), Expect = 6.7
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Frame = -1
Query: 618 APSVMPTPRSWAPT----TSTSRAYCVLDSPRPPSSPGTCSPNAPRSHSPATVPS 466
+PS T S++PT + TS +Y P+SP + SP +P S+SP T PS
Sbjct: 1603 SPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSPTSP-SYSP-TSPS 1654
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 29.1 bits (62), Expect = 0.72
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = -1
Query: 609 VMPT-PRSWAPTTSTSRAYCVLDSPRPPSSPGTCS-PNAPRSHSPATVPSSIFEFS 448
V PT P + P +T Y S PP PG S +A +++ +T P S+ E S
Sbjct: 1595 VKPTLPETPKPAIATHSRYNASFSSSPPPQPGNSSGMSAMNTNTTSTTPVSLSELS 1650
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 29.1 bits (62), Expect = 0.72
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = -1
Query: 609 VMPT-PRSWAPTTSTSRAYCVLDSPRPPSSPGTCS-PNAPRSHSPATVPSSIFEFS 448
V PT P + P +T Y S PP PG S +A +++ +T P S+ E S
Sbjct: 1595 VKPTLPETPKPAIATHSRYNASFSSSPPPQPGNSSGMSAMNTNTTSTTPVSLSELS 1650
>SPAC11E3.13c |||1,3-beta-glucanosyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 510
Score = 28.7 bits (61), Expect = 0.96
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -1
Query: 609 VMPTPRSWAPTTSTSRAYCVLD-SPRPPSSPGTCSPNAPRSHSPATVPSSIFEFSSFLAG 433
V P P S + T +T+ + S SS G+ S + S S + SSI SS ++
Sbjct: 402 VSPGPHSVSTTINTNIVQATISQSSTSGSSSGSSSASTTASSSSVSSGSSISSGSSSMST 461
Query: 432 SFTS 421
S+TS
Sbjct: 462 SYTS 465
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.9 bits (59), Expect = 1.7
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = -1
Query: 657 PNSKIPLKPMD*CAPSVMPTPRSWAPTTSTSRAYCVLDSPRPPSSPGTCSPNAPRSHSPA 478
P++ +P P+ +P P S AP+ ST R+ + SP +SP S ++ S +PA
Sbjct: 1222 PSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRS--SVPSPHSNASPSPTS-SSMASAAPA 1278
>SPBC409.07c |wis1|spc2, smf2|MAP kinase kinase
Wis1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 605
Score = 27.5 bits (58), Expect = 2.2
Identities = 22/66 (33%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Frame = -1
Query: 657 PNSKIPLKPMD*CAPSVMPTPRSWAPTTSTSRAYCVLDSPRPPSSPGTCSPNAPRSH--- 487
P+ +IP P P +PT R T+S SR LD P P P A +
Sbjct: 72 PSREIPSDPP---LPRAVPTVRLGRSTSSRSRNSLNLDMKDPSEKPRRSLPTAAGQNNIG 128
Query: 486 SPATVP 469
SP T P
Sbjct: 129 SPPTPP 134
>SPCC1259.06 |||transcription factor TFIID complex subunit 8
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 222
Score = 27.1 bits (57), Expect = 2.9
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -3
Query: 562 RVLRVGQPQAAELPRHLQPERA 497
++L V QP++A+ PRH E+A
Sbjct: 176 KILNVNQPRSADSPRHASFEKA 197
>SPAC222.09 |seb1||RNA-binding protein Seb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 26.6 bits (56), Expect = 3.9
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
Frame = -1
Query: 603 PTPRSWAPTTSTSRAYCVLDSPRPPSS--PGTCSPNAPR--SHSPATVPSSIFEFSS--F 442
P+PRS P S S ++ + S PP+ P PR P P SI +S F
Sbjct: 350 PSPRSGRPRRSPSPSHLSIPSTLPPADGVPKPTPDGFPRRFERDPTIPPDSIKVYSRTLF 409
Query: 441 LAG 433
L G
Sbjct: 410 LGG 412
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 26.6 bits (56), Expect = 3.9
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +1
Query: 79 FDLECNCRIYENGLFFLLLKVFCNKHDE 162
FDL C+ Y+ F ++C + DE
Sbjct: 2341 FDLNQRCQFYKKPKLFSCFSIYCREFDE 2368
>SPBC215.10 |||haloacid dehalogenase-like
hydrolase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 26.2 bits (55), Expect = 5.1
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -3
Query: 607 DADAEVVGPDHLDEPRVLR 551
D D ++GPDH PR LR
Sbjct: 27 DVDGTLLGPDHKPHPRNLR 45
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 26.2 bits (55), Expect = 5.1
Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 4/66 (6%)
Frame = -1
Query: 666 CGLPNSKIPLKP-MD*CAPSVMPTP---RSWAPTTSTSRAYCVLDSPRPPSSPGTCSPNA 499
C + IP P +D AP P P S AP T + A +P P +S A
Sbjct: 40 CPVRGLTIPPPPSVDHSAPPSGPPPSYSNSAAPATPAASASSAAPAPAPAASQNRAYGAA 99
Query: 498 PRSHSP 481
P+ + P
Sbjct: 100 PQPYPP 105
>SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme
Fub2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 26.2 bits (55), Expect = 5.1
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +3
Query: 369 TNVKCYKSSCRQSRNSFKK*MTPLRMMRIQRLRRVP 476
T + +SS QS N F+K T + I RLR VP
Sbjct: 237 TELNELRSSIGQSDNGFEKIFTKMFTKDIVRLREVP 272
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 25.8 bits (54), Expect = 6.7
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
Frame = -1
Query: 612 SVMPTPRSWAPTTST--SRAYCVLDSPRPP---SSPGTCSPNAPRSHSPATVPSSI 460
S+ PT S P T T + +P PP SS GT S P + + T +SI
Sbjct: 290 SIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSI 345
>SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase
Ppk30|Schizosaccharomyces pombe|chr 2|||Manual
Length = 953
Score = 25.4 bits (53), Expect = 8.9
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1
Query: 546 DSPRPPSSPGTCSPNAPRSH 487
D R PSSP T P RSH
Sbjct: 881 DLERQPSSPDTVHPGIKRSH 900
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 25.4 bits (53), Expect = 8.9
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = -2
Query: 161 SSCLLQKTFSNRKNNPFS*ILQLHSKSKRKLWYHYISN 48
SS +L+ TF R ++P +LQ+ KS W HYI++
Sbjct: 4560 SSDILRTTFI-RSSSPCYPLLQIVLKSFECPWEHYITD 4596
>SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 566
Score = 25.4 bits (53), Expect = 8.9
Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -3
Query: 709 ILAGSDARQVMLFLXRVAEQQDSLEADGLMRPERDADAEVVGP-DHLDEPRVLR 551
+L G+D ++L +V+ + + +E+D L + E ++ E P + EP +R
Sbjct: 288 LLNGTDDNNIVLREVKVSFENEKIESDDLDKNEEISEGEEYTPIEESKEPITVR 341
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 25.4 bits (53), Expect = 8.9
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 8/78 (10%)
Frame = -1
Query: 672 FXCGLPNSKIPLKPMD*CAPSVMPT-PR-----SWAPTTSTSRAYCVLDSPRPPSSPGTC 511
+ LP+ +P +P+ P V+P P+ + P + Y S PP P T
Sbjct: 166 YPVSLPSPNLPHQPIS--KPPVIPNLPKLQVHPNRLPHPIHNHPYSSPTSYPPPLCPATY 223
Query: 510 SPNAPRSHSPAT--VPSS 463
P+ P +PAT PSS
Sbjct: 224 CPSNPPQLAPATAIAPSS 241
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,807,316
Number of Sequences: 5004
Number of extensions: 59641
Number of successful extensions: 241
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 228
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 365309308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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