Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_L13
(762 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28943-3|AAT81203.1| 408|Caenorhabditis elegans Hypothetical pr... 171 5e-43
U28943-2|AAA68357.1| 613|Caenorhabditis elegans Hypothetical pr... 171 5e-43
AC006625-5|AAK68275.1| 427|Caenorhabditis elegans Acyl coa dehy... 68 8e-12
U97403-10|AAB52476.3| 319|Caenorhabditis elegans Hypothetical p... 62 6e-10
AF039038-2|AAK21433.1| 419|Caenorhabditis elegans Hypothetical ... 60 2e-09
AC006625-6|AAN84837.1| 252|Caenorhabditis elegans Acyl coa dehy... 56 3e-08
AF127558-1|AAD21088.1| 419|Caenorhabditis elegans isovaleryl-Co... 55 6e-08
AF038605-3|AAB92016.1| 419|Caenorhabditis elegans Hypothetical ... 55 6e-08
U42838-2|AAB52493.1| 417|Caenorhabditis elegans Hypothetical pr... 54 1e-07
U41279-10|AAK31426.2| 308|Caenorhabditis elegans Hypothetical p... 52 6e-07
U29377-4|AAA68712.1| 412|Caenorhabditis elegans Hypothetical pr... 52 6e-07
Z66513-4|CAA91333.1| 409|Caenorhabditis elegans Hypothetical pr... 48 6e-06
U97194-5|AAB52448.1| 442|Caenorhabditis elegans Hypothetical pr... 41 0.001
L16622-6|AAA27913.2| 408|Caenorhabditis elegans Hypothetical pr... 38 0.008
AC006632-9|AAK85472.1| 409|Caenorhabditis elegans Hypothetical ... 37 0.018
AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical ... 34 0.13
AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical ... 34 0.13
AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical ... 34 0.13
AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical ... 34 0.13
U28993-8|AAK31496.1| 632|Caenorhabditis elegans C.elegans homeo... 33 0.17
U28993-7|AAL27244.1| 641|Caenorhabditis elegans C.elegans homeo... 33 0.17
AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical ... 32 0.51
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 31 0.68
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 31 0.68
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 31 0.89
AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical... 31 0.89
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 31 1.2
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 30 1.6
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 30 1.6
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 30 1.6
U58756-9|AAC48086.1| 667|Caenorhabditis elegans Hypothetical pr... 29 2.7
U18781-1|AAB03374.1| 384|Caenorhabditis elegans alcohol dehydro... 29 3.6
L23646-3|AAK67236.1| 1283|Caenorhabditis elegans Hypothetical pr... 29 3.6
AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical ... 29 3.6
AC006663-4|AAF39899.1| 384|Caenorhabditis elegans Hypothetical ... 29 3.6
AC006663-3|AAL32231.1| 386|Caenorhabditis elegans Hypothetical ... 29 3.6
U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein. 29 4.8
AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior phar... 29 4.8
AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein. 29 4.8
AF003135-5|AAK18990.1| 678|Caenorhabditis elegans Hypothetical ... 29 4.8
AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical ... 29 4.8
AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical ... 29 4.8
Z82284-5|CAB05291.1| 418|Caenorhabditis elegans Hypothetical pr... 28 6.3
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 28 6.3
U40427-5|AAP82652.1| 356|Caenorhabditis elegans Abnormal cell m... 28 8.3
U40427-4|AAA81470.2| 362|Caenorhabditis elegans Abnormal cell m... 28 8.3
AL023828-13|CAA19457.2| 419|Caenorhabditis elegans Hypothetical... 28 8.3
AF150958-1|AAD43178.1| 362|Caenorhabditis elegans guidance prot... 28 8.3
AF067940-7|AAC19206.1| 116|Caenorhabditis elegans Hypothetical ... 28 8.3
AF025460-2|AAF02169.3| 545|Caenorhabditis elegans Prion-like-(q... 28 8.3
>U28943-3|AAT81203.1| 408|Caenorhabditis elegans Hypothetical
protein E04F6.5b protein.
Length = 408
Score = 171 bits (416), Expect = 5e-43
Identities = 85/178 (47%), Positives = 120/178 (67%), Gaps = 2/178 (1%)
Frame = +2
Query: 233 SGARSAASEAQARN-GPRQSASFTLNLFRGRFEPTQVFPFPEPLSDDQRQMLQELVPPVE 409
S + +AA +A+ + S SF +NLFRG+ QVFP+P ++D+Q++ L ++ P+E
Sbjct: 20 SHSAAAAKDAKPKKVAAVDSPSFVMNLFRGKAVTDQVFPYPLNMTDEQKETLGMVMSPLE 79
Query: 410 KFFQEVNDPAKNDENSKIEEGTVAGLWDLGAFGLQVPGELGGLGLSNTQYARLVEVVGAH 589
K EVND KNDE S I + +LG FG+ VP EL G G +N+Q AR+ E+VGA+
Sbjct: 80 KMLVEVNDVVKNDETSDIPRAVLDQFAELGTFGVLVPPELEGSGFNNSQMARVAEIVGAY 139
Query: 590 DLGVGITLGAHQSIGFKGILLFGNPXQKEHYLPRVTSG-EYAAFCLTEPSSGSXAGSI 760
DLG G+ +GAHQSIG+KGILL G QK+ YLP + +G ++AAF LTEP++GS A S+
Sbjct: 140 DLGFGVVMGAHQSIGYKGILLEGTDAQKQKYLPDLATGRKFAAFALTEPTTGSDASSV 197
>U28943-2|AAA68357.1| 613|Caenorhabditis elegans Hypothetical
protein E04F6.5a protein.
Length = 613
Score = 171 bits (416), Expect = 5e-43
Identities = 85/178 (47%), Positives = 120/178 (67%), Gaps = 2/178 (1%)
Frame = +2
Query: 233 SGARSAASEAQARN-GPRQSASFTLNLFRGRFEPTQVFPFPEPLSDDQRQMLQELVPPVE 409
S + +AA +A+ + S SF +NLFRG+ QVFP+P ++D+Q++ L ++ P+E
Sbjct: 20 SHSAAAAKDAKPKKVAAVDSPSFVMNLFRGKAVTDQVFPYPLNMTDEQKETLGMVMSPLE 79
Query: 410 KFFQEVNDPAKNDENSKIEEGTVAGLWDLGAFGLQVPGELGGLGLSNTQYARLVEVVGAH 589
K EVND KNDE S I + +LG FG+ VP EL G G +N+Q AR+ E+VGA+
Sbjct: 80 KMLVEVNDVVKNDETSDIPRAVLDQFAELGTFGVLVPPELEGSGFNNSQMARVAEIVGAY 139
Query: 590 DLGVGITLGAHQSIGFKGILLFGNPXQKEHYLPRVTSG-EYAAFCLTEPSSGSXAGSI 760
DLG G+ +GAHQSIG+KGILL G QK+ YLP + +G ++AAF LTEP++GS A S+
Sbjct: 140 DLGFGVVMGAHQSIGYKGILLEGTDAQKQKYLPDLATGRKFAAFALTEPTTGSDASSV 197
>AC006625-5|AAK68275.1| 427|Caenorhabditis elegans Acyl coa
dehydrogenase protein1, isoform a protein.
Length = 427
Score = 67.7 bits (158), Expect = 8e-12
Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 2/118 (1%)
Frame = +2
Query: 404 VEKFFQEVNDPA--KNDENSKIEEGTVAGLWDLGAFGLQVPGELGGLGLSNTQYARLVEV 577
V KF ++V P + D+ SK+ G+++ G G+ VP E GG G S ++E
Sbjct: 59 VRKFSKDVVKPLVREMDKYSKMSPIVTQGVFENGLMGVHVPEEYGGSGSSFFNAMIVIEE 118
Query: 578 VGAHDLGVGITLGAHQSIGFKGILLFGNPXQKEHYLPRVTSGEYAAFCLTEPSSGSXA 751
+ D V +G H ++ I+ +G QK YLPR+ S A+FC++E +GS A
Sbjct: 119 LAKTDPSVSAMVGIHNTLPVSMIIDYGTEEQKLKYLPRLCSDSLASFCISESGAGSDA 176
>U97403-10|AAB52476.3| 319|Caenorhabditis elegans Hypothetical
protein T10E9.9 protein.
Length = 319
Score = 61.7 bits (143), Expect = 6e-10
Identities = 31/102 (30%), Positives = 51/102 (50%)
Frame = +2
Query: 446 DENSKIEEGTVAGLWDLGAFGLQVPGELGGLGLSNTQYARLVEVVGAHDLGVGITLGAHQ 625
D S++ + G ++ G G++VP + GG G + A ++E + D VG + H
Sbjct: 2 DRTSEMTPAVINGCFENGLMGIEVPEKYGGPGATFFDAALVIEEISKVDASVGAMVDVHN 61
Query: 626 SIGFKGILLFGNPXQKEHYLPRVTSGEYAAFCLTEPSSGSXA 751
++ I+ G QKE YLP+ + +F L+E SGS A
Sbjct: 62 TLFIPLIIELGTEKQKEKYLPKCYTSSVGSFALSETGSGSDA 103
>AF039038-2|AAK21433.1| 419|Caenorhabditis elegans Hypothetical
protein K06A5.6 protein.
Length = 419
Score = 59.7 bits (138), Expect = 2e-09
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 2/136 (1%)
Frame = +2
Query: 350 PEPLSDDQRQMLQELVPPVEKFFQEVNDPA--KNDENSKIEEGTVAGLWDLGAFGLQVPG 523
P PL + +V V +F V P + D+ S++ + + G ++ G G+++P
Sbjct: 34 PSPLQQLSEEE-SSIVGTVRRFAVNVIKPLVREMDDKSQMHQSVITGTFENGLMGIEIPE 92
Query: 524 ELGGLGLSNTQYARLVEVVGAHDLGVGITLGAHQSIGFKGILLFGNPXQKEHYLPRVTSG 703
+ GG G S ++E + D V + + ++ I+ G QK+ YLP++ +
Sbjct: 93 KYGGPGSSFFDAVLVIEELAKVDPSVSVFVDVQNTLVAPLIIQLGTEEQKQKYLPKIVTE 152
Query: 704 EYAAFCLTEPSSGSXA 751
+F L+E SGS A
Sbjct: 153 AIGSFALSETGSGSDA 168
>AC006625-6|AAN84837.1| 252|Caenorhabditis elegans Acyl coa
dehydrogenase protein1, isoform b protein.
Length = 252
Score = 56.0 bits (129), Expect = 3e-08
Identities = 29/82 (35%), Positives = 43/82 (52%)
Frame = +2
Query: 506 GLQVPGELGGLGLSNTQYARLVEVVGAHDLGVGITLGAHQSIGFKGILLFGNPXQKEHYL 685
G+ VP E GG G S ++E + D V +G H ++ I+ +G QK YL
Sbjct: 2 GVHVPEEYGGSGSSFFNAMIVIEELAKTDPSVSAMVGIHNTLPVSMIIDYGTEEQKLKYL 61
Query: 686 PRVTSGEYAAFCLTEPSSGSXA 751
PR+ S A+FC++E +GS A
Sbjct: 62 PRLCSDSLASFCISESGAGSDA 83
>AF127558-1|AAD21088.1| 419|Caenorhabditis elegans isovaleryl-CoA
dehydrogenase precursorprotein.
Length = 419
Score = 54.8 bits (126), Expect = 6e-08
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Frame = +2
Query: 485 LWDLGAFGLQVPGELGGLGLSNTQYARLVEVVGAHDLGVGITLGAHQSIGFKGILLFGNP 664
L D G G+ P E GG G++ + +E + G+ ++ GAH ++ I+ G+
Sbjct: 81 LGDQGLLGITAPAEYGGSGMNYFSHVIAMEELSRAAGGIALSYGAHSNLCINQIVRNGSE 140
Query: 665 XQKEHYLPRVTSGEY-AAFCLTEPSSGSXAGSI 760
Q++ YLP++ SGE+ A ++E +GS S+
Sbjct: 141 EQRKKYLPKLISGEHMGALAMSEAQAGSDVVSM 173
>AF038605-3|AAB92016.1| 419|Caenorhabditis elegans Hypothetical
protein C02B10.1 protein.
Length = 419
Score = 54.8 bits (126), Expect = 6e-08
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Frame = +2
Query: 485 LWDLGAFGLQVPGELGGLGLSNTQYARLVEVVGAHDLGVGITLGAHQSIGFKGILLFGNP 664
L D G G+ P E GG G++ + +E + G+ ++ GAH ++ I+ G+
Sbjct: 81 LGDQGLLGITAPAEYGGSGMNYFSHVIAMEELSRAAGGIALSYGAHSNLCINQIVRNGSE 140
Query: 665 XQKEHYLPRVTSGEY-AAFCLTEPSSGSXAGSI 760
Q++ YLP++ SGE+ A ++E +GS S+
Sbjct: 141 EQRKKYLPKLISGEHMGALAMSEAQAGSDVVSM 173
>U42838-2|AAB52493.1| 417|Caenorhabditis elegans Hypothetical
protein T08G2.3 protein.
Length = 417
Score = 54.0 bits (124), Expect = 1e-07
Identities = 37/137 (27%), Positives = 66/137 (48%), Gaps = 3/137 (2%)
Frame = +2
Query: 359 LSDDQRQMLQELVPPVEKFFQEVNDP--AKNDENSKIEEGTVAGLWDLGAFGLQVPGELG 532
+S D + +E+ KF ++V P AK DE+ + V LG Q+P + G
Sbjct: 27 ISFDLSETQKEIQDAALKFSKDVLVPNAAKFDESGEFPWEIVRQAHSLGLMNPQIPEKYG 86
Query: 533 GLGLSNTQYARLVEVVGAHDLGVGITLGAHQSIGFKGILLFGNPXQKEHYLPRVTSGE-Y 709
G G++ + A +VE + G+ + + S+ + + GN QK+ YL + +
Sbjct: 87 GPGMTTLETALIVEALSYGCTGIQLGI-MGPSLAIAPVYISGNEEQKKKYLGALAAEPII 145
Query: 710 AAFCLTEPSSGSXAGSI 760
A++C+TEP +GS +
Sbjct: 146 ASYCVTEPGAGSDVNGV 162
>U41279-10|AAK31426.2| 308|Caenorhabditis elegans Hypothetical
protein C17C3.12a protein.
Length = 308
Score = 51.6 bits (118), Expect = 6e-07
Identities = 37/141 (26%), Positives = 71/141 (50%), Gaps = 2/141 (1%)
Frame = +2
Query: 335 QVFPFPEPLSDDQRQMLQELVPPVEKFFQEVNDPA--KNDENSKIEEGTVAGLWDLGAFG 508
+VFP + L++++++++++ V+ F Q P + D +++I + + +DL G
Sbjct: 29 RVFPL-QHLNENEKKLVEK----VKNFAQSSVKPLVREMDRDARINKQLLKKAFDLKLMG 83
Query: 509 LQVPGELGGLGLSNTQYARLVEVVGAHDLGVGITLGAHQSIGFKGILLFGNPXQKEHYLP 688
L++ + GG G+S + VE + D + + + ++ I FGN KE YL
Sbjct: 84 LKIDPKYGGSGVSFFELVLAVEELSKIDPAIALIMHLQNALVAPLIEEFGNEELKEKYLK 143
Query: 689 RVTSGEYAAFCLTEPSSGSXA 751
++ AF L+E SGS A
Sbjct: 144 KLCKDSVGAFALSEVVSGSDA 164
>U29377-4|AAA68712.1| 412|Caenorhabditis elegans Hypothetical
protein K05F1.3 protein.
Length = 412
Score = 51.6 bits (118), Expect = 6e-07
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 3/137 (2%)
Frame = +2
Query: 359 LSDDQRQMLQELVPPVEKFFQEVNDP--AKNDENSKIEEGTVAGLWDLGAFGLQVPGELG 532
LSD Q+++ + KF ++V P AK D++ + V LG +P + G
Sbjct: 25 LSDTQKEIQSHAI----KFSKDVLVPNAAKFDKSGEFPWEIVKQAHSLGFMNTIIPEKYG 80
Query: 533 GLGLSNTQYARLVEVVGAHDLGVGITLGAHQSIGFKGILLFGNPXQKEHYLPRVTSGEY- 709
G GLSN A +VE + G+ I + S+ I L G QK+ YL + +
Sbjct: 81 GPGLSNLDTALIVEALSYGCSGLQIAIFG-PSLAAAPICLSGTEEQKKKYLGMLAAEPII 139
Query: 710 AAFCLTEPSSGSXAGSI 760
A++C+TEP +GS +
Sbjct: 140 ASYCVTEPGAGSDVNGV 156
>Z66513-4|CAA91333.1| 409|Caenorhabditis elegans Hypothetical
protein F54D5.7 protein.
Length = 409
Score = 48.4 bits (110), Expect = 6e-06
Identities = 37/142 (26%), Positives = 60/142 (42%), Gaps = 2/142 (1%)
Frame = +2
Query: 341 FPFPEPLSDDQRQ-MLQELVPPVEKFFQEVNDPAKNDENSKIEEGTVAGLWDLGAFGLQV 517
F + L++D+R ML E+ V + + + K + + + +G G
Sbjct: 26 FQLSDQLTEDERSLMLSAREYCQERLLPRVTEAYRTE---KFDPSLIPEMGSMGLLGAPY 82
Query: 518 PGELGGLGLSNTQYARLVEVVGAHDLGVGITLGAHQSIGFKGILLFGNPXQKEHYLPRVT 697
G G G S Y + V D G T+ S+ I +G+ QK+ Y+P +
Sbjct: 83 QG-YGCAGTSTVGYGLIAREVERVDSGYRSTMSVQTSLVIGPIYNYGSEDQKQKYIPDLA 141
Query: 698 SG-EYAAFCLTEPSSGSXAGSI 760
SG + F LTEP+ GS G +
Sbjct: 142 SGKKIGCFGLTEPNHGSNPGGM 163
>U97194-5|AAB52448.1| 442|Caenorhabditis elegans Hypothetical
protein C37A2.3 protein.
Length = 442
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 2/94 (2%)
Frame = +2
Query: 485 LWDLGAFGLQVPGELGGLGLSNTQYARLVEVVGAHDLG-VGITLGAHQSIGFKGILLFGN 661
L D G FG+ P GG G + E +GA + G + +++ + + FG+
Sbjct: 100 LGDHGVFGVNKPEAFGGTGTDIAMATAIAEQMGAINCGSIPMSVMVQTDMSTPALAQFGS 159
Query: 662 PXQKEHYL-PRVTSGEYAAFCLTEPSSGSXAGSI 760
+E +L P +T ++ ++EP +GS ++
Sbjct: 160 DALRERFLRPSITGDLVSSLAVSEPHAGSDVSAV 193
>L16622-6|AAA27913.2| 408|Caenorhabditis elegans Hypothetical
protein C02D5.1 protein.
Length = 408
Score = 37.9 bits (84), Expect = 0.008
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Frame = +2
Query: 485 LWDLGAFGLQVPGELGGLGLSNTQYARLVEVVGAHDLG-VGITLGAHQSIGFKGILLFGN 661
L LG F + P + GG G + E +GA D G + +++ + + FG+
Sbjct: 66 LGQLGVFAVNKPVDYGGTGRDFAMSIAIAEQIGAVDCGSIPMSVMVQSDMSTPALAQFGS 125
Query: 662 PXQKEHYL-PRVTSGEYAAFCLTEPSSGSXAGSI 760
+ +L P + ++ ++EP +GS +I
Sbjct: 126 DSLRNRFLRPSINGDLVSSIAVSEPHAGSDVSAI 159
>AC006632-9|AAK85472.1| 409|Caenorhabditis elegans Hypothetical
protein F28A10.6 protein.
Length = 409
Score = 36.7 bits (81), Expect = 0.018
Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 1/106 (0%)
Frame = +2
Query: 446 DENSKIEEGTVAGLWDLGAFGLQVPGELGGLGLSNTQYARLVEVVGAHDLGVGITLGAHQ 625
D+ ++ + ++G + G+ GG GLS + + E + + + H
Sbjct: 54 DKQGELPMDVLRKAGEMGFGAIYCSGDHGGSGLSRLHASVIFEQLSMGCVSTAAYISIHN 113
Query: 626 SIGFKGILLFGNPXQKEHYLPRVTS-GEYAAFCLTEPSSGSXAGSI 760
+ + +G KE LP + + ++CLTEP +GS A SI
Sbjct: 114 MCAWM-LDTYGPEKLKEDLLPDMAVFKKLGSYCLTEPDAGSDAASI 158
>AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical
protein T23E7.2e protein.
Length = 908
Score = 33.9 bits (74), Expect = 0.13
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = -1
Query: 651 SKIPLKPMD*CAPSVMPTPRSWAPT----TSTSRAYCVLDSPRPPSSPGTCSPNAPRSHS 484
S++P P V PTP+S AP+ T S A + P P S+ + +P PRS +
Sbjct: 319 SEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSV-PPTPKSAVPSEAPPTPRSAA 377
Query: 483 PATVP 469
P+ VP
Sbjct: 378 PSDVP 382
Score = 31.5 bits (68), Expect = 0.68
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = -1
Query: 651 SKIPLKPMD*CAPSVMPTPRSWAPTTS--TSRAYCVLDSPRPPSSPG 517
S++PL P SV PTP+S P+ + T R+ D P P S G
Sbjct: 343 SEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPKSNG 389
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = -1
Query: 645 IPLKPMD*CAPSVMPTPRSWAPT--TSTSRAYCVLDSPRPPSSPGTCS-PNAPRSHSPAT 475
+P P V PTP+S AP+ T ++ + P P S S P P+S P+
Sbjct: 309 VPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSE 368
Query: 474 VP 469
P
Sbjct: 369 AP 370
>AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical
protein T23E7.2b protein.
Length = 880
Score = 33.9 bits (74), Expect = 0.13
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = -1
Query: 651 SKIPLKPMD*CAPSVMPTPRSWAPT----TSTSRAYCVLDSPRPPSSPGTCSPNAPRSHS 484
S++P P V PTP+S AP+ T S A + P P S+ + +P PRS +
Sbjct: 269 SEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSV-PPTPKSAVPSEAPPTPRSAA 327
Query: 483 PATVP 469
P+ VP
Sbjct: 328 PSDVP 332
Score = 31.5 bits (68), Expect = 0.68
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = -1
Query: 651 SKIPLKPMD*CAPSVMPTPRSWAPTTS--TSRAYCVLDSPRPPSSPG 517
S++PL P SV PTP+S P+ + T R+ D P P S G
Sbjct: 293 SEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPKSNG 339
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = -1
Query: 645 IPLKPMD*CAPSVMPTPRSWAPT--TSTSRAYCVLDSPRPPSSPGTCS-PNAPRSHSPAT 475
+P P V PTP+S AP+ T ++ + P P S S P P+S P+
Sbjct: 259 VPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSE 318
Query: 474 VP 469
P
Sbjct: 319 AP 320
>AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical
protein T23E7.2c protein.
Length = 885
Score = 33.9 bits (74), Expect = 0.13
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = -1
Query: 651 SKIPLKPMD*CAPSVMPTPRSWAPT----TSTSRAYCVLDSPRPPSSPGTCSPNAPRSHS 484
S++P P V PTP+S AP+ T S A + P P S+ + +P PRS +
Sbjct: 319 SEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSV-PPTPKSAVPSEAPPTPRSAA 377
Query: 483 PATVP 469
P+ VP
Sbjct: 378 PSDVP 382
Score = 31.5 bits (68), Expect = 0.68
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = -1
Query: 651 SKIPLKPMD*CAPSVMPTPRSWAPTTS--TSRAYCVLDSPRPPSSPG 517
S++PL P SV PTP+S P+ + T R+ D P P S G
Sbjct: 343 SEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPKSNG 389
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = -1
Query: 645 IPLKPMD*CAPSVMPTPRSWAPT--TSTSRAYCVLDSPRPPSSPGTCS-PNAPRSHSPAT 475
+P P V PTP+S AP+ T ++ + P P S S P P+S P+
Sbjct: 309 VPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSE 368
Query: 474 VP 469
P
Sbjct: 369 AP 370
>AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical
protein T23E7.2a protein.
Length = 930
Score = 33.9 bits (74), Expect = 0.13
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = -1
Query: 651 SKIPLKPMD*CAPSVMPTPRSWAPT----TSTSRAYCVLDSPRPPSSPGTCSPNAPRSHS 484
S++P P V PTP+S AP+ T S A + P P S+ + +P PRS +
Sbjct: 319 SEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSV-PPTPKSAVPSEAPPTPRSAA 377
Query: 483 PATVP 469
P+ VP
Sbjct: 378 PSDVP 382
Score = 31.5 bits (68), Expect = 0.68
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = -1
Query: 651 SKIPLKPMD*CAPSVMPTPRSWAPTTS--TSRAYCVLDSPRPPSSPG 517
S++PL P SV PTP+S P+ + T R+ D P P S G
Sbjct: 343 SEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRSAAPSDVPPTPKSNG 389
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = -1
Query: 645 IPLKPMD*CAPSVMPTPRSWAPT--TSTSRAYCVLDSPRPPSSPGTCS-PNAPRSHSPAT 475
+P P V PTP+S AP+ T ++ + P P S S P P+S P+
Sbjct: 309 VPPTPKSAAPSEVPPTPKSAAPSEVPPTPKSAAPSEVPLTPKSAAQSSVPPTPKSAVPSE 368
Query: 474 VP 469
P
Sbjct: 369 AP 370
>U28993-8|AAK31496.1| 632|Caenorhabditis elegans C.elegans homeobox
protein 38,isoform a protein.
Length = 632
Score = 33.5 bits (73), Expect = 0.17
Identities = 23/63 (36%), Positives = 32/63 (50%)
Frame = -1
Query: 600 TPRSWAPTTSTSRAYCVLDSPRPPSSPGTCSPNAPRSHSPATVPSSIFEFSSFLAGSFTS 421
+P P+ STS A + P S+P S AP S S + PSS F +S L+ S+ +
Sbjct: 54 SPHPITPSASTSSATSATEEPATSSAPQLAS-LAPMSMS-SEQPSSSFSSASLLSSSYET 111
Query: 420 *KN 412
KN
Sbjct: 112 IKN 114
>U28993-7|AAL27244.1| 641|Caenorhabditis elegans C.elegans homeobox
protein 38,isoform b protein.
Length = 641
Score = 33.5 bits (73), Expect = 0.17
Identities = 23/63 (36%), Positives = 32/63 (50%)
Frame = -1
Query: 600 TPRSWAPTTSTSRAYCVLDSPRPPSSPGTCSPNAPRSHSPATVPSSIFEFSSFLAGSFTS 421
+P P+ STS A + P S+P S AP S S + PSS F +S L+ S+ +
Sbjct: 54 SPHPITPSASTSSATSATEEPATSSAPQLAS-LAPMSMS-SEQPSSSFSSASLLSSSYET 111
Query: 420 *KN 412
KN
Sbjct: 112 IKN 114
>AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical
protein F54A3.1 protein.
Length = 425
Score = 31.9 bits (69), Expect = 0.51
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = -1
Query: 618 APSVMPTPRSWAPTTSTSRAYCVLDSPRPPSSPGTCSPNAPRSH--SPATVPSSI 460
AP+V+ R+ APTT+ + RP +S G +P APRS P T SS+
Sbjct: 332 APNVV---RNGAPTTAQQAPRKPIGIARPQTSSGIAAPGAPRSRIAMPTTSSSSL 383
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 31.5 bits (68), Expect = 0.68
Identities = 25/62 (40%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = -1
Query: 612 SVMPTPRSWAPTTSTSRAYCVLDSPRPPSSPGTCSPNAPRSHS-PATVPSSIFEFSSFLA 436
S+ P P S +P ST+ A S S + + AP S S P+TVPSS FSS
Sbjct: 1346 SISPVPTS-SPIPSTTFASSTSGSTISDVSSVSTTSLAPLSSSLPSTVPSSTQSFSSTSE 1404
Query: 435 GS 430
GS
Sbjct: 1405 GS 1406
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 31.5 bits (68), Expect = 0.68
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Frame = -1
Query: 612 SVMPTPRSWAPTT--STSRAYCVLDSPRPPSSPGTCSPNAP--RSHSPATVPSSIFEFSS 445
S PTP + PTT ST A +SP T + +AP +SHSP++ +S +S
Sbjct: 495 SNQPTPSTSNPTTPKSTVTASPSTTGATSTASPSTITSSAPTSQSHSPSSTMTSTVPVTS 554
Query: 444 FLAGSFTS 421
A + T+
Sbjct: 555 TFASTTTT 562
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical protein
F35A5.1 protein.
Length = 1274
Score = 31.1 bits (67), Expect = 0.89
Identities = 18/63 (28%), Positives = 25/63 (39%)
Frame = -1
Query: 648 KIPLKPMD*CAPSVMPTPRSWAPTTSTSRAYCVLDSPRPPSSPGTCSPNAPRSHSPATVP 469
K P+KP D +P P+T T + P P S P SP +SP P
Sbjct: 825 KTPVKPRDPSPKKAVPAK----PSTKTDAPPVSVKKPEPVSKPKEPSPKKAEPNSPVVPP 880
Query: 468 SSI 460
+ +
Sbjct: 881 TPV 883
>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
protein Y59A8B.1a protein.
Length = 1641
Score = 31.1 bits (67), Expect = 0.89
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -1
Query: 618 APSVMPTPRSWAPTTSTSRAYCVLDSPRPPSSPGTCSPNAPRSHSPATVPSSIF 457
AP P P PTTS + ++C L P PP P + A + SP V + F
Sbjct: 310 APQPRPRPIPVPPTTSYNSSFCGL-LPPPPVPPDLRASAASAAASPPMVQDASF 362
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/60 (33%), Positives = 22/60 (36%)
Frame = -1
Query: 660 LPNSKIPLKPMD*CAPSVMPTPRSWAPTTSTSRAYCVLDSPRPPSSPGTCSPNAPRSHSP 481
LP P P C PS +P P P A C P P SP C AP +P
Sbjct: 89 LPPPPPPASPC--CGPSPVPAP--CCPPPPAPAAPCCPPPPPPTPSPLVCCKQAPVPENP 144
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Frame = -1
Query: 618 APSVMPTPRSWAPT----TSTSRAYCVLDSPRPPSSPGTCSPNAPRSHSPAT 475
+PS PT S++PT + TS +Y PSSP + SP++P S+SP++
Sbjct: 1623 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSP-SYSPSSP-SYSPSS 1672
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Frame = -1
Query: 618 APSVMPTPRSWAPT----TSTSRAYCVLDSPRPPSSPGTCSPNAPRSHSPAT 475
+PS PT S++PT + TS +Y P+SP + SP++P S+SP++
Sbjct: 1616 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSPSSP-SYSPSS 1665
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Frame = -1
Query: 618 APSVMPTPRSWAPT----TSTSRAYCVLDSPRPPSSPGTCSPNAPRSHSPAT 475
+PS PT S++PT + TS +Y P+SP + SP +P S+SP++
Sbjct: 1609 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSPTSP-SYSPSS 1658
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = -1
Query: 618 APSVMPTPRSWAPTTSTSRAYCVLDSPRPPSSPGTCSPNAPRSHSPAT 475
+PS PT S++P TS +Y PSSP + SP++PR +SP +
Sbjct: 1637 SPSYSPTSPSYSP---TSPSYSPSSPSYSPSSP-SYSPSSPR-YSPTS 1679
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = -1
Query: 618 APSVMPTPRSWAPTTSTSRAYCVLDSPRPPSSPGTCSPNAPRSHSPATVPSS 463
+P+ PT S+ P++ +P P PGT + +P SP PSS
Sbjct: 1782 SPTYSPTSPSYTPSSPQYSPTSPTYTPSPSEQPGTSAQYSPT--SPTYSPSS 1831
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Frame = -1
Query: 618 APSVMPTPRSWAPT----TSTSRAYCVLDSPRPPSSPGTCSPNAPRSHSPAT 475
+PS PT S++PT + TS +Y PSSP + SP++P S+SP++
Sbjct: 1630 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSP-SYSPSSP-SYSPSS 1679
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Frame = -1
Query: 618 APSVMPTPRSWAPT----TSTSRAYCVLDSPRPPSSPGTCSPNAPRSHSPAT 475
+PS PT S++PT + TS +Y P+SP + SP++P S+SP++
Sbjct: 1623 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSPSSP-SYSPSS 1672
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Frame = -1
Query: 618 APSVMPTPRSWAPT----TSTSRAYCVLDSPRPPSSPGTCSPNAPRSHSPAT 475
+PS PT S++PT + TS +Y P+SP + SP +P S+SP++
Sbjct: 1616 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSPTSP-SYSPSS 1665
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = -1
Query: 618 APSVMPTPRSWAPTTSTSRAYCVLDSPRPPSSPGTCSPNAPRSHSPAT 475
+PS PT S++P TS +Y PSSP + SP++PR +SP +
Sbjct: 1644 SPSYSPTSPSYSP---TSPSYSPSSPSYSPSSP-SYSPSSPR-YSPTS 1686
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = -1
Query: 618 APSVMPTPRSWAPTTSTSRAYCVLDSPRPPSSPGTCSPNAPRSHSPATVPSS 463
+P+ PT S+ P++ +P P PGT + +P SP PSS
Sbjct: 1789 SPTYSPTSPSYTPSSPQYSPTSPTYTPSPSEQPGTSAQYSPT--SPTYSPSS 1838
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = -1
Query: 657 PNSKIPLKPMD*CAPSVMPTPRSWAPTTSTSRAYCVLDSPRPPSSPGTCSPNAPRS 490
P P P APSV+PT + T A +P+ P P SPNA ++
Sbjct: 448 PEPSRPAVPPVAPAPSVIPTSSQPSQPKQTQPAQPTPSAPKIPEGPAQPSPNAVKT 503
>U58756-9|AAC48086.1| 667|Caenorhabditis elegans Hypothetical
protein F58F9.7 protein.
Length = 667
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/65 (27%), Positives = 25/65 (38%)
Frame = +2
Query: 566 LVEVVGAHDLGVGITLGAHQSIGFKGILLFGNPXQKEHYLPRVTSGEYAAFCLTEPSSGS 745
L E + A+D G L H ++ + G K+ + AFCLTE GS
Sbjct: 88 LTETLEAYDQGTSARLFLHGNVFGAAVKSMGTDRHKDLIQKTENNEIVGAFCLTEVGHGS 147
Query: 746 XAGSI 760
I
Sbjct: 148 NTAEI 152
>U18781-1|AAB03374.1| 384|Caenorhabditis elegans alcohol
dehydrogenase protein.
Length = 384
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 458 KIEEGTVAGLWDLGAFGLQV 517
K+EEG+ +W LGA GL V
Sbjct: 191 KVEEGSTVAVWGLGAVGLAV 210
>L23646-3|AAK67236.1| 1283|Caenorhabditis elegans Hypothetical
protein F44E2.4 protein.
Length = 1283
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/54 (24%), Positives = 22/54 (40%)
Frame = -1
Query: 615 PSVMPTPRSWAPTTSTSRAYCVLDSPRPPSSPGTCSPNAPRSHSPATVPSSIFE 454
P PTP + P T++ + +P PP + CS + P + F+
Sbjct: 619 PVARPTPVTMPPRAPTAKPLPIPSAPTPPVASSKCSIEDQKKFEECVKPLTSFQ 672
>AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical
protein Y50D4C.2 protein.
Length = 554
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 458 KIEEGTVAGLWDLGAFGLQV 517
K+EEG+ +W LGA GL V
Sbjct: 364 KVEEGSTVAVWGLGAVGLAV 383
>AC006663-4|AAF39899.1| 384|Caenorhabditis elegans Hypothetical
protein H24K24.3a protein.
Length = 384
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 458 KIEEGTVAGLWDLGAFGLQV 517
K+EEG+ +W LGA GL V
Sbjct: 191 KVEEGSTVAVWGLGAVGLAV 210
>AC006663-3|AAL32231.1| 386|Caenorhabditis elegans Hypothetical
protein H24K24.3b protein.
Length = 386
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 458 KIEEGTVAGLWDLGAFGLQV 517
K+EEG+ +W LGA GL V
Sbjct: 193 KVEEGSTVAVWGLGAVGLAV 212
>U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein.
Length = 515
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = -1
Query: 615 PSVMPTPRSWAPTTSTSRAY--CVLDSPRPPSSPGTCSPNAPRSHSP 481
P+ P S + + S Y C++DS ++PG+ S + P H P
Sbjct: 437 PTTTSIPMSTTSSGTGSPVYKVCIIDSEHRGNAPGSSSDSEPDHHCP 483
>AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior pharynx
in excess protein1 protein.
Length = 515
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = -1
Query: 615 PSVMPTPRSWAPTTSTSRAY--CVLDSPRPPSSPGTCSPNAPRSHSP 481
P+ P S + + S Y C++DS ++PG+ S + P H P
Sbjct: 437 PTTTSIPMSTTSSGTGSPVYKVCIIDSEHRGNAPGSSSDSEPDHHCP 483
>AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein.
Length = 1666
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -1
Query: 606 MPTPRSWAPT-TSTSRAYCVLDSPRPPSSPGTCSPNAPRSHSPA 478
+P PR PT TSTS Y L S RP S G SP++ + PA
Sbjct: 1301 IPPPR--VPTVTSTSSNYAPLHSIRPASMYGYQSPSSSTTVIPA 1342
>AF003135-5|AAK18990.1| 678|Caenorhabditis elegans Hypothetical
protein W03F11.6b protein.
Length = 678
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -1
Query: 606 MPTPRSWAPT-TSTSRAYCVLDSPRPPSSPGTCSPNAPRSHSPA 478
+P PR PT TSTS Y L S RP S G SP++ + PA
Sbjct: 319 IPPPR--VPTVTSTSSNYAPLHSIRPASMYGYQSPSSSTTVIPA 360
>AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical
protein W03F11.6c protein.
Length = 1419
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -1
Query: 606 MPTPRSWAPT-TSTSRAYCVLDSPRPPSSPGTCSPNAPRSHSPA 478
+P PR PT TSTS Y L S RP S G SP++ + PA
Sbjct: 1299 IPPPR--VPTVTSTSSNYAPLHSIRPASMYGYQSPSSSTTVIPA 1340
>AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical
protein W03F11.6a protein.
Length = 1658
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -1
Query: 606 MPTPRSWAPT-TSTSRAYCVLDSPRPPSSPGTCSPNAPRSHSPA 478
+P PR PT TSTS Y L S RP S G SP++ + PA
Sbjct: 1299 IPPPR--VPTVTSTSSNYAPLHSIRPASMYGYQSPSSSTTVIPA 1340
>Z82284-5|CAB05291.1| 418|Caenorhabditis elegans Hypothetical
protein T27E7.6 protein.
Length = 418
Score = 28.3 bits (60), Expect = 6.3
Identities = 9/42 (21%), Positives = 27/42 (64%)
Frame = +2
Query: 359 LSDDQRQMLQELVPPVEKFFQEVNDPAKNDENSKIEEGTVAG 484
+ ++++++++E +EK+ +E+N+ AKN + + + + G
Sbjct: 176 VEEEKQKIMKERSDELEKYTREMNEMAKNHQEERKKHNAIIG 217
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/61 (31%), Positives = 25/61 (40%)
Frame = -1
Query: 657 PNSKIPLKPMD*CAPSVMPTPRSWAPTTSTSRAYCVLDSPRPPSSPGTCSPNAPRSHSPA 478
P S P+ P + PS P+P P+ S + D P PP PG + P P
Sbjct: 209 PPSPGPVDPSEDPKPSEPPSPGPVDPSDEPSPS----DPPGPPGPPGPPTRRPPGPPGPP 264
Query: 477 T 475
T
Sbjct: 265 T 265
>U40427-5|AAP82652.1| 356|Caenorhabditis elegans Abnormal cell
migration protein13, isoform b protein.
Length = 356
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -1
Query: 621 CAPSVMPTPRSWAPTTSTSRAYCVLDSPR--PPSSPGTCSPNAPRSHSP 481
C S +P + + TT+T+ D P+ PPS P P+A S++P
Sbjct: 258 CLKSTIPIKGASSHTTTTTATDYKPDPPQFYPPSPPKMPPPSAASSYTP 306
>U40427-4|AAA81470.2| 362|Caenorhabditis elegans Abnormal cell
migration protein13, isoform a protein.
Length = 362
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -1
Query: 621 CAPSVMPTPRSWAPTTSTSRAYCVLDSPR--PPSSPGTCSPNAPRSHSP 481
C S +P + + TT+T+ D P+ PPS P P+A S++P
Sbjct: 264 CLKSTIPIKGASSHTTTTTATDYKPDPPQFYPPSPPKMPPPSAASSYTP 312
>AL023828-13|CAA19457.2| 419|Caenorhabditis elegans Hypothetical
protein Y17G7B.11 protein.
Length = 419
Score = 27.9 bits (59), Expect = 8.3
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
Frame = -1
Query: 645 IPLKPMD*CAPSVMPT-PRSWAPT------TSTSRAYCVLDSPRPPSSPGTCSP 505
IP++ M+ AP MPT P AP S S+A PP+SPG +P
Sbjct: 315 IPIRQMNQAAPGAMPTMPSVSAPPYPVVAGASASQAVYPTAPSAPPASPGGEAP 368
>AF150958-1|AAD43178.1| 362|Caenorhabditis elegans guidance protein
MIG-13 protein.
Length = 362
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -1
Query: 621 CAPSVMPTPRSWAPTTSTSRAYCVLDSPR--PPSSPGTCSPNAPRSHSP 481
C S +P + + TT+T+ D P+ PPS P P+A S++P
Sbjct: 264 CLKSTIPIKGASSHTTTTTATDYKPDPPQFYPPSPPKMPPPSAASSYTP 312
>AF067940-7|AAC19206.1| 116|Caenorhabditis elegans Hypothetical
protein F36F12.7 protein.
Length = 116
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/52 (30%), Positives = 20/52 (38%)
Frame = -1
Query: 636 KPMD*CAPSVMPTPRSWAPTTSTSRAYCVLDSPRPPSSPGTCSPNAPRSHSP 481
KP+ P+ M PRS P+ + D S T S N P SP
Sbjct: 33 KPVADTPPAAMIAPRSRTPSPGAGKRSVPRDGVSSSVSSSTVSKNEPAKKSP 84
>AF025460-2|AAF02169.3| 545|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 41
protein.
Length = 545
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = -1
Query: 618 APSVMPTPRSWAPTTSTSRAYCVLDSPRPPSSPGTCSPNAPRSHSPATVPSS 463
AP+ P PR+ A +TS + S PSS ++P H + PS+
Sbjct: 33 APASAPAPRAGAGAGATSSS-AASSSTSTPSSSSHHKKSSPPHHQKSAAPSA 83
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,911,527
Number of Sequences: 27780
Number of extensions: 356135
Number of successful extensions: 1617
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 1374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1594
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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