Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_L10
         (645 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    25   0.40 
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    23   2.2  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    23   2.8  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    23   2.8  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   5.0  

>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 25.4 bits (53), Expect = 0.40
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = -3

Query: 166 FSFIILVYKIVCLCL 122
           +SF +L+ +IVCLCL
Sbjct: 322 WSFALLITRIVCLCL 336


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 16/53 (30%), Positives = 29/53 (54%)
 Frame = -1

Query: 321 IAPILKQSSSVFLSKRNVI*TIAFLNQWAI*H*KNFSNRTSSS*DLLVQTNSL 163
           IAPI  ++S+V  SK  ++ T+A+   + I     F  R++ S   L+Q  ++
Sbjct: 22  IAPISYKNSNVNYSKIGIVQTVAYFVIFIILTIVFFEKRSALSPFELIQIRTI 74


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 18/54 (33%), Positives = 28/54 (51%)
 Frame = -3

Query: 166 FSFIILVYKIVCLCLIIISFGF*INNL*IETNIFLSNLK*RHVKADCY*STLQR 5
           +SF  L+ + VCLCL    FG  +N+   +  + L++     V AD Y   +QR
Sbjct: 324 WSFGFLIVRTVCLCL----FGGKVNDESTQPMLVLNS-----VSADVYNLEIQR 368


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 18/54 (33%), Positives = 28/54 (51%)
 Frame = -3

Query: 166 FSFIILVYKIVCLCLIIISFGF*INNL*IETNIFLSNLK*RHVKADCY*STLQR 5
           +SF  L+ + VCLCL    FG  +N+   +  + L++     V AD Y   +QR
Sbjct: 324 WSFGFLIVRTVCLCL----FGGKVNDESTQPMLVLNS-----VSADVYNLEIQR 368


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +3

Query: 129 KQTILYTNIIKLK 167
           K TIL+ NI+KLK
Sbjct: 160 KVTILHPNIVKLK 172


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,039
Number of Sequences: 336
Number of extensions: 3119
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)