Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_L10
         (645 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            25   2.7  
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    24   4.7  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    24   4.7  

>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 581 PQVNGAASPWGNRLHDPL 528
           P +  AAS W  R H P+
Sbjct: 505 PSIRSAASEWNPRAHQPM 522


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -1

Query: 393 LTLRTFFPV*GTPPHRPIRNFVPKIAPI 310
           +T  T  P+ G PP RPI    P+  P+
Sbjct: 109 MTKATSLPL-GVPPFRPIPKPTPEAEPV 135


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -1

Query: 393 LTLRTFFPV*GTPPHRPIRNFVPKIAPI 310
           +T  T  P+ G PP RPI    P+  P+
Sbjct: 114 MTKATSLPL-GVPPFRPIPKPTPEAEPV 140


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 613,258
Number of Sequences: 2352
Number of extensions: 12446
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)