Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_L05
(641 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292375-1|CAL23187.2| 311|Tribolium castaneum gustatory recept... 24 0.93
AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory recept... 24 1.2
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 23 2.1
AM292354-1|CAL23166.1| 321|Tribolium castaneum gustatory recept... 23 2.1
AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein p... 23 2.1
AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein p... 23 2.1
AM292349-1|CAL23161.1| 248|Tribolium castaneum gustatory recept... 22 3.7
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 4.9
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 4.9
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 4.9
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 4.9
>AM292375-1|CAL23187.2| 311|Tribolium castaneum gustatory receptor
candidate 54 protein.
Length = 311
Score = 24.2 bits (50), Expect = 0.93
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = -3
Query: 189 SSMKFLIQVSACFVTIKQ----VHMSAFLYELLHIKXWKTNFDVLISN 58
SS+ FL+ S T ++ +H+S F+Y L+ + DV+ SN
Sbjct: 191 SSLGFLLYASKKQFTFEETFAIIHLSVFVYTLVSVILIIMGCDVVASN 238
>AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory receptor
candidate 51 protein.
Length = 771
Score = 23.8 bits (49), Expect = 1.2
Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = -2
Query: 400 KNLCRTMSTS-LLYSSFKSITALVGVSILKIK*LASLWVIP 281
KN C T L++ F + S LKI L SLW P
Sbjct: 527 KNFCFGFITKQLIFMIFVTYQLYCWSSFLKISVLQSLWASP 567
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 23.0 bits (47), Expect = 2.1
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +3
Query: 120 MPTYELALLLRNMPKP 167
+PTY+ + RN+PKP
Sbjct: 194 LPTYKWMQVKRNVPKP 209
>AM292354-1|CAL23166.1| 321|Tribolium castaneum gustatory receptor
candidate 33 protein.
Length = 321
Score = 23.0 bits (47), Expect = 2.1
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 264 YKSTAHGMTHKEANYFIF 317
Y++ AHGMT ++ F F
Sbjct: 173 YETVAHGMTVQKTTLFFF 190
>AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein
protein.
Length = 210
Score = 23.0 bits (47), Expect = 2.1
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +3
Query: 120 MPTYELALLLRNMPKP 167
+PTY+ + RN+PKP
Sbjct: 194 LPTYKWMQVKRNVPKP 209
>AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein
protein.
Length = 253
Score = 23.0 bits (47), Expect = 2.1
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +3
Query: 120 MPTYELALLLRNMPKP 167
+PTY+ + RN+PKP
Sbjct: 194 LPTYKWMQVKRNVPKP 209
>AM292349-1|CAL23161.1| 248|Tribolium castaneum gustatory receptor
candidate 28 protein.
Length = 248
Score = 22.2 bits (45), Expect = 3.7
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -1
Query: 371 SFVFLFQVYNCFGGCI 324
SF F++ VYN FG +
Sbjct: 65 SFRFVYAVYNIFGAFV 80
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 4.9
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2
Query: 301 ASLWVIPCAVDL*GIG 254
A LW+IP A+ L +G
Sbjct: 251 ADLWIIPIAIFLVSLG 266
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 4.9
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2
Query: 301 ASLWVIPCAVDL*GIG 254
A LW+IP A+ L +G
Sbjct: 251 ADLWIIPIAIFLVSLG 266
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.8 bits (44), Expect = 4.9
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2
Query: 301 ASLWVIPCAVDL*GIG 254
A LW+IP A+ L +G
Sbjct: 251 ADLWIIPIAIFLVSLG 266
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.8 bits (44), Expect = 4.9
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2
Query: 301 ASLWVIPCAVDL*GIG 254
A LW+IP A+ L +G
Sbjct: 251 ADLWIIPIAIFLVSLG 266
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,519
Number of Sequences: 336
Number of extensions: 3304
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -