Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_L05
         (641 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75955-8|CAB00122.1|  410|Caenorhabditis elegans Hypothetical pr...    37   0.011
AF098504-6|ABO52818.1|  300|Caenorhabditis elegans Serpentine re...    30   1.6  
AF025461-5|AAB70992.1|  297|Caenorhabditis elegans Hypothetical ...    29   2.8  
Z93389-5|CAI79177.1|  212|Caenorhabditis elegans Hypothetical pr...    29   3.7  
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr...    29   3.7  
AF000264-8|AAK70649.2|  165|Caenorhabditis elegans Hypothetical ...    29   3.7  
Z92797-1|CAB07234.1|  552|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z78014-1|CAB01428.1|  411|Caenorhabditis elegans Hypothetical pr...    28   6.5  
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.      28   6.5  
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o...    28   6.5  
U23178-1|AAK68301.1| 1280|Caenorhabditis elegans Guanylyl cyclas...    27   8.6  

>Z75955-8|CAB00122.1|  410|Caenorhabditis elegans Hypothetical
           protein R07B7.13 protein.
          Length = 410

 Score = 37.1 bits (82), Expect = 0.011
 Identities = 18/70 (25%), Positives = 34/70 (48%)
 Frame = +3

Query: 15  LLKILPRLPTQNLLNLKLIHRNLSSSXLYVIIRIKMPTYELALLLRNMPKPELKTSLKRI 194
           ++++ P L    + NLKLI   +++          +   E A +L   PK   +T++K +
Sbjct: 186 IIQMKPYLKVSKIPNLKLIRNQMNAELAGYAHNGSLAMVEYAKMLDFFPKISKETAIKLV 245

Query: 195 SHAIFDCGGI 224
            H +F CG +
Sbjct: 246 KHGLFMCGSL 255


>AF098504-6|ABO52818.1|  300|Caenorhabditis elegans Serpentine
           receptor, class t protein61 protein.
          Length = 300

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 18/58 (31%), Positives = 29/58 (50%)
 Frame = -3

Query: 186 SMKFLIQVSACFVTIKQVHMSAFLYELLHIKXWKTNFDVLISN*VNFELGVLAVFSVV 13
           S  F +Q    ++ +  + +SAF Y L+  +  KT    LIS   N E+ VL   +V+
Sbjct: 195 SGSFYVQKVEMYIEVGGIFVSAFFYLLIIYRLVKTKKRFLISKSYNAEIKVLIQATVI 252


>AF025461-5|AAB70992.1|  297|Caenorhabditis elegans Hypothetical
           protein M01D1.8 protein.
          Length = 297

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 18/44 (40%), Positives = 25/44 (56%)
 Frame = +3

Query: 15  LLKILPRLPTQNLLNLKLIHRNLSSSXLYVIIRIKMPTYELALL 146
           L+K LP  PT++L      HR+LSSS L  + +I  P Y+   L
Sbjct: 140 LIKTLP--PTESLFLGYARHRSLSSSQLVALRQIWTPEYQHVFL 181


>Z93389-5|CAI79177.1|  212|Caenorhabditis elegans Hypothetical
           protein T13F3.8 protein.
          Length = 212

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 3/120 (2%)
 Frame = +3

Query: 96  LYVIIRIKMPTYELALLLRNMPKPELKTSLKRISHA-IFDCGGIIRNIENLGFRPMPYKS 272
           L +II + + T  L L  +   K + K  ++ +S   +    G+  N  N+G  P P + 
Sbjct: 11  LQLIIWMSVLTASLHLC-KKKGKAKPKAKVREMSTVKMTTTTGLTTNNVNIG-NPAPEEK 68

Query: 273 TAHGMTHK--EANYFIFKIDTPTKAVIDLKEEYKRDVDIVRQRFFKVKEEERKACTLEEE 446
                  K  E N    K D P K     +EE K++     ++  +VKEEE+K  +  +E
Sbjct: 69  KKEEKVEKKPEENKEAEKKDEPKKEEEKKEEEKKKEEKKEEEKKEEVKEEEKKDDSKRDE 128


>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical protein
            ZK783.1 protein.
          Length = 2585

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +3

Query: 345  IDLKEEYKRDVDIVRQRFFKVKEEERKACTLEEELLP 455
            I ++EE K D       + ++ E E+K CT++EE +P
Sbjct: 1800 IKIEEEPKSDKTACTDEWSRLCELEKKQCTVDEEEVP 1836


>AF000264-8|AAK70649.2|  165|Caenorhabditis elegans Hypothetical
           protein F43E2.11 protein.
          Length = 165

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = -1

Query: 323 YLKDKIVGFFVGHTMCSGLVRHWSKS*IFYVSDDSSAIEYSM 198
           +LK    GFFV H MC+G +       I  V +   A   +M
Sbjct: 8   FLKQGSTGFFVAHFMCAGFINQQQAEIIIRVPERPVAAAATM 49


>Z92797-1|CAB07234.1|  552|Caenorhabditis elegans Hypothetical
           protein H25P06.1 protein.
          Length = 552

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 17/54 (31%), Positives = 28/54 (51%)
 Frame = +3

Query: 354 KEEYKRDVDIVRQRFFKVKEEERKACTLEEELLPPAYREDVQKMIQIGKTQVNR 515
           +EE KR  D+  QR    + EER+   +E+E       E  QK+ ++ + Q+ R
Sbjct: 491 REEEKRLKDLEAQRLRDAEAEERRLLEIEKE--KEEAEERAQKISEMMRYQIER 542


>Z78014-1|CAB01428.1|  411|Caenorhabditis elegans Hypothetical
           protein F42E8.1 protein.
          Length = 411

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +2

Query: 38  PNSKFTQFEINTSKFVFQXFICNNSY 115
           PN  F+Q  +  S+F F+ FI N SY
Sbjct: 385 PNLTFSQCVVFMSRFFFEMFIHNGSY 410


>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
          Length = 1475

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 18/64 (28%), Positives = 31/64 (48%)
 Frame = +3

Query: 255  PMPYKSTAHGMTHKEANYFIFKIDTPTKAVIDLKEEYKRDVDIVRQRFFKVKEEERKACT 434
            P P K  A     +E    I KI    K V+D + E +++ D  R R  + ++E+R+   
Sbjct: 1051 PPPKKEPADEQPEREKEKLILKIPKMLKPVVDDRREDRKERDRDRDR-DRDRDEDREKVR 1109

Query: 435  LEEE 446
             +E+
Sbjct: 1110 DKED 1113


>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
            pal-1 protein 3,isoform a protein.
          Length = 1475

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 18/64 (28%), Positives = 31/64 (48%)
 Frame = +3

Query: 255  PMPYKSTAHGMTHKEANYFIFKIDTPTKAVIDLKEEYKRDVDIVRQRFFKVKEEERKACT 434
            P P K  A     +E    I KI    K V+D + E +++ D  R R  + ++E+R+   
Sbjct: 1051 PPPKKEPADEQPEREKEKLILKIPKMLKPVVDDRREDRKERDRDRDR-DRDRDEDREKVR 1109

Query: 435  LEEE 446
             +E+
Sbjct: 1110 DKED 1113


>U23178-1|AAK68301.1| 1280|Caenorhabditis elegans Guanylyl cyclase
            protein 12 protein.
          Length = 1280

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 12/43 (27%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
 Frame = +3

Query: 351  LKEEYKRDV-DIVRQRFFKVKEEERKACTLEEELLPPAYREDV 476
            + E+Y+  + D+V +R  ++K+E+R++  L + +LP +  E +
Sbjct: 970  MMEKYQTQLEDLVDERTIELKDEQRRSQHLLQRMLPSSVAEQL 1012


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,523,051
Number of Sequences: 27780
Number of extensions: 304161
Number of successful extensions: 818
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 818
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)