Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_L03
(823 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P40304 Cluster: Proteasome subunit beta type-1 precurso... 306 3e-82
UniRef50_Q9IB84 Cluster: Proteasome subunit beta type-1-A; n=14;... 295 9e-79
UniRef50_P20618 Cluster: Proteasome subunit beta type-1 precurso... 293 3e-78
UniRef50_P42742 Cluster: Proteasome subunit beta type-1; n=7; Vi... 227 3e-58
UniRef50_O64464 Cluster: Proteasome subunit beta type-1; n=6; Or... 215 8e-55
UniRef50_Q9U794 Cluster: Proteasome subunit beta type-1; n=7; Tr... 209 7e-53
UniRef50_Q1ZXN1 Cluster: Proteasome subunit beta type; n=2; Dict... 204 3e-51
UniRef50_Q5KFP2 Cluster: Proteasome subunit beta type; n=3; Fung... 198 1e-49
UniRef50_Q7QWS6 Cluster: Proteasome subunit beta type; n=1; Giar... 196 4e-49
UniRef50_A6R393 Cluster: Proteasome component C5; n=5; Ascomycot... 196 7e-49
UniRef50_Q6CA23 Cluster: Yarrowia lipolytica chromosome D of str... 192 1e-47
UniRef50_P23724 Cluster: Proteasome component C5; n=23; Fungi/Me... 192 1e-47
UniRef50_A3FQE7 Cluster: Proteasome subunit beta type; n=2; Cryp... 188 1e-46
UniRef50_A0BPF5 Cluster: Chromosome undetermined scaffold_12, wh... 178 1e-43
UniRef50_A5K9H5 Cluster: Proteasome subunit beta type; n=1; Plas... 178 2e-43
UniRef50_Q4N2N3 Cluster: Proteasome beat subunit, putative; n=3;... 177 4e-43
UniRef50_P34286 Cluster: Proteasome subunit beta type-1; n=2; Ca... 176 5e-43
UniRef50_UPI0000498367 Cluster: proteasome beta subunit; n=1; En... 167 3e-40
UniRef50_Q5B7I7 Cluster: Putative uncharacterized protein; n=1; ... 166 5e-40
UniRef50_UPI000150A719 Cluster: Proteasome A-type and B-type fam... 165 9e-40
UniRef50_A2F716 Cluster: Proteasome subunit beta type; n=1; Tric... 165 1e-39
UniRef50_Q4YMY0 Cluster: Proteasome subunit beta type; n=5; Plas... 158 1e-37
UniRef50_Q8SRH6 Cluster: 20S PROTEASOME ALPHA-TYPE SUBUNIT; n=1;... 147 3e-34
UniRef50_UPI0000E48A2E Cluster: PREDICTED: similar to 20S protea... 127 3e-28
UniRef50_Q98RS2 Cluster: Proteasome subunit beta type; n=1; Guil... 116 5e-25
UniRef50_A1RX71 Cluster: Proteasome endopeptidase complex; n=1; ... 106 6e-22
UniRef50_Q9N9W8 Cluster: Proteasome subunit beta type-3; n=2; Gi... 103 4e-21
UniRef50_Q41941 Cluster: Proteasome subunit RC5 like; n=2; core ... 98 3e-19
UniRef50_A2BN24 Cluster: Proteasome beta subunit; n=2; Desulfuro... 97 4e-19
UniRef50_UPI0000E46471 Cluster: PREDICTED: similar to proteasome... 92 2e-17
UniRef50_Q9YES4 Cluster: Proteasome beta subunit; n=1; Aeropyrum... 92 2e-17
UniRef50_Q8ZST5 Cluster: Proteasome, beta subunit; n=5; Thermopr... 91 2e-17
UniRef50_Q980L4 Cluster: Proteasome subunit; n=4; Sulfolobaceae|... 89 1e-16
UniRef50_Q5CU29 Cluster: Possible proteasome component; n=2; Cry... 88 2e-16
UniRef50_Q01FQ8 Cluster: Proteasome subunit beta type; n=1; Ostr... 88 3e-16
UniRef50_Q9V0N9 Cluster: Proteasome subunit beta precursor; n=4;... 88 3e-16
UniRef50_A2BN27 Cluster: Proteasome beta; n=3; Desulfurococcales... 86 1e-15
UniRef50_Q4U969 Cluster: Proteasome subunit beta type; n=3; Acon... 85 2e-15
UniRef50_Q5AF53 Cluster: Putative uncharacterized protein PRE7; ... 85 2e-15
UniRef50_Q8GZE1 Cluster: Beta 3 subunit of 20S proteasome; n=1; ... 85 3e-15
UniRef50_P49720 Cluster: Proteasome subunit beta type-3; n=85; E... 84 5e-15
UniRef50_Q86E06 Cluster: Proteasome subunit beta type; n=3; Schi... 83 8e-15
UniRef50_A5K9T5 Cluster: Proteasome subunit beta type; n=8; Euka... 83 8e-15
UniRef50_Q23237 Cluster: Proteasome subunit beta type-3; n=3; Bi... 83 8e-15
UniRef50_Q9YER0 Cluster: Proteasome beta subunit; n=1; Aeropyrum... 83 1e-14
UniRef50_Q9LST7 Cluster: Proteasome subunit beta type-3; n=10; V... 81 4e-14
UniRef50_UPI000049A243 Cluster: proteasome beta subunit; n=1; En... 79 1e-13
UniRef50_Q58634 Cluster: Proteasome subunit beta precursor; n=9;... 78 2e-13
UniRef50_Q9V247 Cluster: PsmB proteasome, subunit beta; n=4; The... 77 4e-13
UniRef50_Q8TW10 Cluster: Protease subunit of the proteasome; n=2... 77 5e-13
UniRef50_Q9P996 Cluster: Proteasome subunit beta precursor; n=10... 77 5e-13
UniRef50_A7DSL9 Cluster: Proteasome endopeptidase complex; n=1; ... 77 7e-13
UniRef50_Q9NDA1 Cluster: Proteasome subunit beta type-3; n=6; Tr... 73 9e-12
UniRef50_A5UM14 Cluster: Proteasome, beta subunit; n=1; Methanob... 71 4e-11
UniRef50_Q8SSI0 Cluster: 26S PROTEASOME BETA SUBUNIT, theta chai... 71 5e-11
UniRef50_Q98S25 Cluster: Proteasome subunit beta type; n=1; Guil... 69 1e-10
UniRef50_A7AWU8 Cluster: Proteasome beta 2 subunit, putative; n=... 68 2e-10
UniRef50_A0RU86 Cluster: 20S proteasome, alpha and beta subunit;... 68 2e-10
UniRef50_A7D410 Cluster: Proteasome endopeptidase complex; n=2; ... 67 4e-10
UniRef50_P28061 Cluster: Proteasome subunit beta precursor; n=4;... 67 4e-10
UniRef50_Q8ZYF2 Cluster: Proteasome beta subunit; n=5; Thermopro... 66 8e-10
UniRef50_Q5CUK0 Cluster: Proteasome subunit beta type; n=2; Cryp... 66 1e-09
UniRef50_Q22MS9 Cluster: Proteasome subunit beta type; n=2; Olig... 66 1e-09
UniRef50_Q966I8 Cluster: Proteasome subunit beta type; n=2; Caen... 65 2e-09
UniRef50_Q2VIK4 Cluster: RcPSMB3; n=15; Euteleostomi|Rep: RcPSMB... 65 2e-09
UniRef50_Q9HR36 Cluster: Proteasome, subunit alpha; n=7; Halobac... 65 2e-09
UniRef50_Q74MP5 Cluster: NEQ203; n=1; Nanoarchaeum equitans|Rep:... 65 2e-09
UniRef50_Q9UXF3 Cluster: Proteasome subunit beta precursor; n=5;... 65 2e-09
UniRef50_A3DN21 Cluster: 20S proteasome, A and B subunits; n=1; ... 64 5e-09
UniRef50_Q5CU00 Cluster: Pre3p/proteasome regulatory subunit bet... 62 2e-08
UniRef50_P49721 Cluster: Proteasome subunit beta type-2; n=40; F... 61 4e-08
UniRef50_Q0UWV2 Cluster: Predicted protein; n=4; Pezizomycotina|... 60 5e-08
UniRef50_Q7XY60 Cluster: Proteasome chain protein; n=1; Griffith... 59 1e-07
UniRef50_Q4QGU1 Cluster: Proteasome subunit beta type; n=7; Tryp... 59 2e-07
UniRef50_P28072 Cluster: Proteasome subunit beta type-6 precurso... 58 3e-07
UniRef50_P38624 Cluster: Proteasome component PRE3 precursor; n=... 57 6e-07
UniRef50_Q8LD27 Cluster: Proteasome subunit beta type-6 precurso... 56 1e-06
UniRef50_A0RXV1 Cluster: 20S proteasome, alpha and beta subunit;... 54 3e-06
UniRef50_Q6BG89 Cluster: Proteasome subunit beta type; n=3; Para... 54 4e-06
UniRef50_A0CW62 Cluster: Proteasome subunit beta type; n=3; Olig... 54 4e-06
UniRef50_Q5DAM2 Cluster: Proteasome subunit beta type; n=1; Schi... 52 2e-05
UniRef50_Q9VNA5 Cluster: Probable proteasome subunit beta type-4... 52 2e-05
UniRef50_Q9VQE5 Cluster: Probable proteasome subunit beta type-2... 52 2e-05
UniRef50_UPI00004991C1 Cluster: proteasome beta subunit; n=1; En... 51 4e-05
UniRef50_Q8SR11 Cluster: Proteasome subunit beta type; n=1; Ence... 51 4e-05
UniRef50_UPI0000499449 Cluster: proteasome beta subunit; n=1; En... 50 5e-05
UniRef50_Q4SNR3 Cluster: Chromosome 15 SCAF14542, whole genome s... 50 5e-05
UniRef50_A2F2T6 Cluster: Proteasome subunit beta type; n=1; Tric... 50 5e-05
UniRef50_Q8SS01 Cluster: 26S PROTEASOME BETA-TYPE SUBUNIT; n=1; ... 50 5e-05
UniRef50_Q7QVB7 Cluster: Proteasome subunit beta type; n=2; Giar... 49 1e-04
UniRef50_Q5CQ43 Cluster: Proteasome subunit beta type; n=2; Cryp... 49 2e-04
UniRef50_O62102 Cluster: Proteasome subunit beta type; n=2; Caen... 49 2e-04
UniRef50_Q55DY7 Cluster: Proteasome subunit beta type 2; n=1; Di... 48 2e-04
UniRef50_P28065 Cluster: Proteasome subunit beta type-9 precurso... 48 3e-04
UniRef50_Q7R9U3 Cluster: Proteasome subunit beta type; n=5; Plas... 48 4e-04
UniRef50_O23714 Cluster: Proteasome subunit beta type-2-A; n=9; ... 48 4e-04
UniRef50_Q00WK9 Cluster: Proteasome subunit beta type; n=2; Ostr... 47 5e-04
UniRef50_UPI000023D2A5 Cluster: hypothetical protein FG06803.1; ... 46 9e-04
UniRef50_A4RRA7 Cluster: Proteasome subunit beta type; n=2; Ostr... 46 0.001
UniRef50_O23717 Cluster: Proteasome subunit beta type-5-A precur... 46 0.002
UniRef50_Q99436 Cluster: Proteasome subunit beta type-7 precurso... 45 0.002
UniRef50_P28074 Cluster: Proteasome subunit beta type-5 precurso... 45 0.002
UniRef50_UPI000049877C Cluster: proteasome beta subunit; n=1; En... 45 0.003
UniRef50_Q9XUV0 Cluster: Proteasome subunit beta type; n=2; Caen... 45 0.003
UniRef50_P40306 Cluster: Proteasome subunit beta type-10 precurs... 45 0.003
UniRef50_Q00U03 Cluster: 20S proteasome beta 4 subunit; n=3; Vir... 44 0.003
UniRef50_Q9AW13 Cluster: Proteasome subunit beta type; n=1; Guil... 44 0.005
UniRef50_Q7QT27 Cluster: Proteasome subunit beta type; n=2; Giar... 44 0.005
UniRef50_Q23TC6 Cluster: Proteasome subunit alpha type 7-like, p... 44 0.005
UniRef50_Q7DLS1 Cluster: Proteasome subunit beta type-7-B precur... 44 0.005
UniRef50_O96788 Cluster: Proteasome subunit alpha type-1; n=10; ... 44 0.005
UniRef50_A1UHS7 Cluster: 20S proteasome, A and B subunits; n=19;... 44 0.006
UniRef50_A1R6Q7 Cluster: Putative 20S proteasome beta-subunit; n... 43 0.011
UniRef50_Q5TBG5 Cluster: Proteasome (Prosome, macropain) subunit... 43 0.011
UniRef50_P28062 Cluster: Proteasome subunit beta type-8 precurso... 42 0.014
UniRef50_Q4MZR6 Cluster: 20S proteasome beta 7 subunit, putative... 42 0.019
UniRef50_P22141 Cluster: Proteasome component C11; n=36; Ascomyc... 42 0.019
UniRef50_Q9U570 Cluster: Proteasome subunit beta type; n=6; Plas... 42 0.025
UniRef50_A7AVH7 Cluster: Proteasome subunit beta type 4; n=1; Ba... 42 0.025
UniRef50_Q8T8V8 Cluster: Proteasome subunit beta type; n=13; Neo... 41 0.033
UniRef50_Q7R5Z3 Cluster: GLP_81_66910_67563; n=1; Giardia lambli... 41 0.043
UniRef50_Q4UI67 Cluster: Proteasome subunit beta type; n=3; Piro... 41 0.043
UniRef50_Q4Q1Q9 Cluster: Proteasome subunit beta type; n=8; Tryp... 41 0.043
UniRef50_A2F3X4 Cluster: Family T1, proteasome beta subunit, thr... 41 0.043
UniRef50_A0D881 Cluster: Proteasome subunit beta type; n=1; Para... 41 0.043
UniRef50_Q4P203 Cluster: Proteasome subunit beta type; n=1; Usti... 40 0.057
UniRef50_Q9VK14 Cluster: Proteasome subunit alpha type; n=2; Sop... 40 0.075
UniRef50_Q8SRU3 Cluster: 26S PROTEASOME ZETA CHAIN; n=4; Microsp... 40 0.075
UniRef50_Q60177 Cluster: Proteasome subunit alpha; n=29; Archaea... 40 0.075
UniRef50_Q89WM9 Cluster: ATP-dependent protease hslV; n=45; cell... 40 0.075
UniRef50_Q98S31 Cluster: Proteasome subunit beta type; n=1; Guil... 40 0.099
UniRef50_Q98RW3 Cluster: Similar to proteasome A-type submit; n=... 39 0.13
UniRef50_Q7QXH1 Cluster: Proteasome subunit alpha type; n=2; Gia... 39 0.13
UniRef50_Q22X00 Cluster: Proteasome A-type and B-type family pro... 39 0.13
UniRef50_Q86T01 Cluster: Full-length cDNA clone CS0DK007YN03 of ... 39 0.13
UniRef50_Q4P0X9 Cluster: Proteasome subunit alpha type; n=3; Fun... 38 0.30
UniRef50_UPI000155FE5D Cluster: PREDICTED: similar to Proteasome... 38 0.40
UniRef50_UPI000155BA31 Cluster: PREDICTED: similar to proteasome... 38 0.40
UniRef50_Q5CTQ7 Cluster: Proteasome subunit alpha type; n=3; Cry... 37 0.70
UniRef50_A6SEI0 Cluster: Proteasome subunit beta type; n=1; Botr... 37 0.70
UniRef50_Q27575 Cluster: Proteasome subunit alpha type-7-1B; n=1... 37 0.70
UniRef50_UPI0000DB76B0 Cluster: PREDICTED: similar to proteasome... 36 0.93
UniRef50_Q8I6Y3 Cluster: Proteasome subunit beta type; n=8; Tryp... 36 1.2
UniRef50_A0RWA6 Cluster: 20S proteasome, alpha and beta subunit;... 36 1.6
UniRef50_UPI0000E47CE3 Cluster: PREDICTED: hypothetical protein;... 35 2.1
UniRef50_Q59PN5 Cluster: Putative uncharacterized protein; n=2; ... 35 2.1
UniRef50_Q017X9 Cluster: Alpha 2 subunit of 20S proteasome; n=6;... 35 2.8
UniRef50_A5B031 Cluster: Putative uncharacterized protein; n=1; ... 35 2.8
UniRef50_Q8MSZ2 Cluster: GM14375p; n=3; Drosophila melanogaster|... 35 2.8
UniRef50_Q7QUP6 Cluster: GLP_47_22543_21776; n=2; Giardia intest... 34 3.7
UniRef50_A0CDQ2 Cluster: Chromosome undetermined scaffold_17, wh... 34 3.7
UniRef50_Q60KD2 Cluster: Putative uncharacterized protein CBG241... 34 4.9
UniRef50_Q4UHS5 Cluster: Putative uncharacterized protein; n=2; ... 34 4.9
UniRef50_A5UNB7 Cluster: Putative uncharacterized protein; n=1; ... 33 6.5
UniRef50_A3V8G4 Cluster: Putative glycosyltransferase; n=3; Rhod... 33 8.6
UniRef50_P60900 Cluster: Proteasome subunit alpha type-6; n=69; ... 33 8.6
>UniRef50_P40304 Cluster: Proteasome subunit beta type-1 precursor;
n=6; Endopterygota|Rep: Proteasome subunit beta type-1
precursor - Drosophila melanogaster (Fruit fly)
Length = 235
Score = 306 bits (752), Expect = 3e-82
Identities = 143/229 (62%), Positives = 177/229 (77%), Gaps = 2/229 (0%)
Frame = +2
Query: 95 ENFPEYAVPGAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKL 274
E FP+Y VPG K F PY NGGSIVAIAGDD+AVI ADTRLS+G++I++R Q KLFKL
Sbjct: 7 EQFPDYQVPGMKHPDFSPYESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKL 66
Query: 275 SESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYV 454
S TVLG+ GCW DTL+LT ++ RMQ YEH H ++MTT AVAQMLS +Y +RFFPYYV
Sbjct: 67 SPQTVLGSAGCWADTLSLTGSIKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYV 126
Query: 455 SNVLAGLDSDGKGCVYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNM--QNVTEA 628
SN+LAG+D++GKG VYSYDPIGHC + +RAGG+A LQP+LDNQIG KNM ++ +
Sbjct: 127 SNILAGIDNEGKGVVYSYDPIGHCEKATYRAGGTAGTLLQPVLDNQIGHKNMNLEDADKI 186
Query: 629 PLTREKALALLKDVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 775
LT+E+A+++ D FISAAERDIYTGDS+ I IIT GI+ LR+D
Sbjct: 187 KLTKERAVSVASDTFISAAERDIYTGDSVLINIITKDGIEVRTLTLRQD 235
>UniRef50_Q9IB84 Cluster: Proteasome subunit beta type-1-A; n=14;
Deuterostomia|Rep: Proteasome subunit beta type-1-A -
Carassius auratus (Goldfish)
Length = 238
Score = 295 bits (724), Expect = 9e-79
Identities = 131/235 (55%), Positives = 184/235 (78%)
Frame = +2
Query: 71 SYKMLSVNENFPEYAVPGAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTR 250
S + N +Y G +H+F PYA NGG+++A+AG+D+A++ +DTRLS G+SI++R
Sbjct: 4 SAQACGANGRMKDYHYTGPVEHKFSPYAFNGGTVLAVAGEDFALVASDTRLSEGYSIHSR 63
Query: 251 DQKKLFKLSESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYY 430
D K +KL+++TV+G +G D LTLT++++AR++MY+H +NKSMT+ A+A MLST+LY
Sbjct: 64 DSPKCYKLTDTTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKSMTSGAIAAMLSTILYG 123
Query: 431 KRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNM 610
+RFFPYYV N++ GLD +G+G VYS+DP+G R ++AGGSA+A LQPLLDNQIG KNM
Sbjct: 124 RRFFPYYVYNIIGGLDEEGRGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIGFKNM 183
Query: 611 QNVTEAPLTREKALALLKDVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 775
+NV + PL++EKA+ L+KDVFISAAERD+YTGD++ I IIT GI+EE LRKD
Sbjct: 184 ENVEQVPLSQEKAVQLVKDVFISAAERDVYTGDALKICIITKEGIREEIVPLRKD 238
>UniRef50_P20618 Cluster: Proteasome subunit beta type-1 precursor;
n=27; Eumetazoa|Rep: Proteasome subunit beta type-1
precursor - Homo sapiens (Human)
Length = 241
Score = 293 bits (719), Expect = 3e-78
Identities = 131/218 (60%), Positives = 175/218 (80%)
Frame = +2
Query: 122 GAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGAT 301
G Q RF PY NGG+I+AIAG+D+A++ +DTRLS GFSI+TRD K +KL++ TV+G +
Sbjct: 24 GPLQLRFSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCS 83
Query: 302 GCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDS 481
G D LTLT++++AR++MY+H +NK+MTT A+A MLST+LY +RFFPYYV N++ GLD
Sbjct: 84 GFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDE 143
Query: 482 DGKGCVYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALL 661
+GKG VYS+DP+G R +F+AGGSA+A LQPLLDNQ+G KNMQNV PL+ ++A+ L+
Sbjct: 144 EGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLV 203
Query: 662 KDVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 775
KDVFISAAERD+YTGD++ I I+T GI+EE LRKD
Sbjct: 204 KDVFISAAERDVYTGDALRICIVTKEGIREETVSLRKD 241
>UniRef50_P42742 Cluster: Proteasome subunit beta type-1; n=7;
Viridiplantae|Rep: Proteasome subunit beta type-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 223
Score = 227 bits (555), Expect = 3e-58
Identities = 110/221 (49%), Positives = 151/221 (68%), Gaps = 5/221 (2%)
Frame = +2
Query: 128 KQH-RFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATG 304
KQH + PY +NGG+ VAIAG DY VI ADTR+STG+SI +RD K+ KL++ VL ++G
Sbjct: 3 KQHANWSPYDNNGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSG 62
Query: 305 CWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSD 484
D L ++L++R +Y+H+HNK M+ PA+AQ+LS LY+KRFFPYY NVL GLD +
Sbjct: 63 FQADVKALQKVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDEE 122
Query: 485 GKGCVYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQI----GLKNMQNVTEAPLTREKAL 652
GKGCV++YD +G R + A GS + + P LDNQ+ L + + PL+ +A+
Sbjct: 123 GKGCVFTYDAVGSYERVGYGAQGSGSTLIMPFLDNQLKSPSPLLLPKQDSNTPLSEAEAV 182
Query: 653 ALLKDVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 775
L+K VF SA ERDIYTGD + I+I+ A GI+ E +LRKD
Sbjct: 183 DLVKTVFASATERDIYTGDKLEIMILKADGIKTELMDLRKD 223
>UniRef50_O64464 Cluster: Proteasome subunit beta type-1; n=6; Oryza
sativa|Rep: Proteasome subunit beta type-1 - Oryza
sativa subsp. japonica (Rice)
Length = 221
Score = 215 bits (526), Expect = 8e-55
Identities = 105/213 (49%), Positives = 145/213 (68%), Gaps = 4/213 (1%)
Frame = +2
Query: 149 YADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTL 328
Y +NGG+ VAIAG DY V+ ADTRLS G++I TRD K+ +L++ L ++G D L
Sbjct: 9 YENNGGTCVAIAGADYCVVAADTRLSVGYNILTRDHSKICELADKCALASSGFQGDIKAL 68
Query: 329 TRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSY 508
+ L AR +Y+H+HNK M+ PA+AQ+LS LYYKRFFPYY NVL GLDS+GKGCV++Y
Sbjct: 69 HKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTY 128
Query: 509 DPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKN--MQNVTEA--PLTREKALALLKDVFI 676
D +G R + A G+ +A + P+LDNQ+ + + +A PL+ +A+ L+KDVF
Sbjct: 129 DAVGSYERTGYSAQGTGSALIMPVLDNQLKSPSPLLLPARDAVTPLSETEAVDLVKDVFA 188
Query: 677 SAAERDIYTGDSIYILIITAHGIQEEKFELRKD 775
SA ERDIYTGD + I++I G + E +LRKD
Sbjct: 189 SATERDIYTGDKLEIVVINKAGTKREYIDLRKD 221
>UniRef50_Q9U794 Cluster: Proteasome subunit beta type-1; n=7;
Trypanosomatidae|Rep: Proteasome subunit beta type-1 -
Trypanosoma brucei brucei
Length = 258
Score = 209 bits (510), Expect = 7e-53
Identities = 106/222 (47%), Positives = 147/222 (66%), Gaps = 4/222 (1%)
Frame = +2
Query: 122 GAKQH--RFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTR-DQKKLFKLSESTVL 292
GAK H + PY DNGG+I AIAG +Y V+GADTRL+ F I+TR D KLFKL++ L
Sbjct: 37 GAKGHPQHWSPYTDNGGTIAAIAGSNYVVLGADTRLNGDFCIHTRSDTSKLFKLTDRIFL 96
Query: 293 GATGCWCDTLTLTRLLQARMQMYEHEHN-KSMTTPAVAQMLSTMLYYKRFFPYYVSNVLA 469
++G D L L ++L+ R+Q Y++ + K +T A+A++ STMLY +RFFPYY N++
Sbjct: 97 ASSGMQADRLQLQQMLKYRIQWYQYNNGGKVPSTKAIAKLTSTMLYQRRFFPYYTFNMIV 156
Query: 470 GLDSDGKGCVYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKA 649
G+D G G YSYDP+G + GSA++ ++PLLD + ++M A LT E+A
Sbjct: 157 GIDEKGAGVCYSYDPVGSTEPFRYGTCGSASSFVEPLLDCLLTRQHMVTQAPADLTMEEA 216
Query: 650 LALLKDVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 775
L +LK+ F AAERDI+TGD++ IITA G+ E FELRKD
Sbjct: 217 LGMLKNAFTGAAERDIFTGDTVCFHIITADGVGTEMFELRKD 258
>UniRef50_Q1ZXN1 Cluster: Proteasome subunit beta type; n=2;
Dictyostelium discoideum|Rep: Proteasome subunit beta
type - Dictyostelium discoideum AX4
Length = 236
Score = 204 bits (497), Expect = 3e-51
Identities = 97/215 (45%), Positives = 141/215 (65%), Gaps = 2/215 (0%)
Frame = +2
Query: 137 RFEPYADNGGSIVAIAGDDYAVIGADTRLSTG-FSIYTRDQKKLFKLSESTVLGATGCWC 313
RFE Y DNGG+++A+AG DY VI DTR+S G + I TR K+F+L++ VL +G
Sbjct: 22 RFEAYVDNGGTVLAVAGKDYCVIAGDTRMSDGGYGIQTRKYTKIFQLTKKCVLATSGMQA 81
Query: 314 DTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKG 493
DT+ L + L++ ++ +E EH K M+TPA+AQ LS LYYKRFFPYY N++AG+D G+G
Sbjct: 82 DTIALQKRLKSMLESFEKEHGKPMSTPAIAQFLSNTLYYKRFFPYYTFNLVAGVDEQGEG 141
Query: 494 CVYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVT-EAPLTREKALALLKDV 670
+++YD +G R + + GS + PLLDNQ+ N Q V ++ E+ ++ +KD
Sbjct: 142 WIWTYDAVGSHERVKYSSQGSGNQLVIPLLDNQVAKFNQQIVEGNKDVSCEQVVSFVKDS 201
Query: 671 FISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 775
SA ERDIYTGD I+++ +G+ EKFEL+ D
Sbjct: 202 ITSAGERDIYTGDFADIVVVDKNGVHWEKFELKLD 236
>UniRef50_Q5KFP2 Cluster: Proteasome subunit beta type; n=3;
Fungi/Metazoa group|Rep: Proteasome subunit beta type -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 272
Score = 198 bits (483), Expect = 1e-49
Identities = 97/221 (43%), Positives = 138/221 (62%), Gaps = 6/221 (2%)
Frame = +2
Query: 98 NFPEYAVPGAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLS 277
++ ++A + H F PY+DNGGSI+AIAG D+++I DTR S G+SI TR +K+++L+
Sbjct: 10 SYQDHAAGPVQHHGFNPYSDNGGSILAIAGKDFSIIAGDTRQSEGYSIQTRYARKVWQLT 69
Query: 278 ESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVS 457
+ VL G D + ++ R++ YEH HNK+M ++A+M+ TMLY KRFFPYYV
Sbjct: 70 DKVVLATNGFAADGNNFVKRVKQRLEWYEHAHNKAMGLKSIARMIQTMLYGKRFFPYYVY 129
Query: 458 NVLAGLDSDGKGCVYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQ-NVTEAP- 631
N+L G++ DG G VYS+DP+G R RA G+A + +QP LDNQ+ KN Q AP
Sbjct: 130 NILGGIEEDGSGAVYSFDPVGSYEREACRAAGAAQSLIQPFLDNQVYFKNQQPEPGAAPF 189
Query: 632 ----LTREKALALLKDVFISAAERDIYTGDSIYILIITAHG 742
L L+L+ D F SA ER I GD + I ++ A G
Sbjct: 190 VPGNLPLSTVLSLVVDSFTSATERHIEVGDGMEIYVVMAKG 230
>UniRef50_Q7QWS6 Cluster: Proteasome subunit beta type; n=1; Giardia
lamblia ATCC 50803|Rep: Proteasome subunit beta type -
Giardia lamblia ATCC 50803
Length = 254
Score = 196 bits (479), Expect = 4e-49
Identities = 98/227 (43%), Positives = 142/227 (62%)
Frame = +2
Query: 95 ENFPEYAVPGAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKL 274
+ PE + K F+PY DNGG+I+AIAG D+A+I DTRLS G++I +R+ +K+F +
Sbjct: 33 KKMPEVSNAPLKDPDFDPYIDNGGTIIAIAGPDFAMIAGDTRLSEGYNILSRNVRKVFPV 92
Query: 275 SESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYV 454
++ V A+G D L + ++ Y + K + ++LS M+YY+R FP+Y
Sbjct: 93 TDKIVYAASGMHADVQRLLKHMKIESTEYYLKTQKEIAIEQFIRLLSAMMYYRRSFPWYT 152
Query: 455 SNVLAGLDSDGKGCVYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPL 634
S+++AG+DS+G+G VYSYD IG R + + G+ A + P+LD I KN EA +
Sbjct: 153 SSIVAGIDSEGRGAVYSYDVIGSTLRTRYGSAGTGNAMICPILDEAILSKN-----EAEI 207
Query: 635 TREKALALLKDVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 775
TRE A L++ F S AERDIYTGDS+ + I+A GIQE FELRKD
Sbjct: 208 TREFAFELIQSAFRSCAERDIYTGDSVVAMCISADGIQERTFELRKD 254
>UniRef50_A6R393 Cluster: Proteasome component C5; n=5;
Ascomycota|Rep: Proteasome component C5 - Ajellomyces
capsulatus NAm1
Length = 266
Score = 196 bits (477), Expect = 7e-49
Identities = 108/240 (45%), Positives = 138/240 (57%), Gaps = 22/240 (9%)
Frame = +2
Query: 122 GAKQHR-FEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSEST---- 286
G KQH F PY DNGGS + IAG DYA++ DTR +G++I TR KLFK+ E
Sbjct: 27 GPKQHHGFNPYTDNGGSTLGIAGKDYAILAGDTRSVSGYNINTRYAPKLFKIGEGDECGE 86
Query: 287 ----VLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYV 454
VL G D L L A ++MY+++H K M+ A AQ L+T+LY KRFFPYYV
Sbjct: 87 GAHLVLSVVGFAADGRALKERLDAIVKMYKYKHGKPMSVNACAQRLATILYSKRFFPYYV 146
Query: 455 SNVLAGLDSDGKGCVYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNM-------- 610
+LAG+D DGKG +YSYDP+G R RA G+AA+ + P LDNQ+ KN
Sbjct: 147 HAILAGMDEDGKGALYSYDPVGSYEREYCRAAGAAASLIMPFLDNQVNFKNQYLPGSGEG 206
Query: 611 -----QNVTEAPLTREKALALLKDVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 775
Q P R+ AL L+ D F SA ER I GD + +++IT GIQE L+KD
Sbjct: 207 NAMDKQPRPSEPPPRDVALQLVNDAFTSAVERHIEVGDGLQVMVITREGIQEIYHPLKKD 266
>UniRef50_Q6CA23 Cluster: Yarrowia lipolytica chromosome D of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome D of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 238
Score = 192 bits (467), Expect = 1e-47
Identities = 93/215 (43%), Positives = 137/215 (63%)
Frame = +2
Query: 131 QHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCW 310
+HRF PY GDD+A++ DTR +TG+SI +R Q K+F + ++ ++ A G
Sbjct: 34 EHRFNPYG----------GDDFALLAGDTRNTTGYSINSRYQPKVFDVGDNILVTANGFS 83
Query: 311 CDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGK 490
D L ++ +++Y +++NK + + A+ + MLY KRFFPYYV ++AGLD +GK
Sbjct: 84 ADGDALIENIKQHVELYHYQNNKPLKVQSCARAIQHMLYNKRFFPYYVHTIIAGLDEEGK 143
Query: 491 GCVYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDV 670
G VYSYDP+G R RAGGSAA+ + P LD+Q+ KN Q PLT E+AL ++KD
Sbjct: 144 GAVYSYDPVGSYEREFCRAGGSAASLVMPFLDSQVNKKNQQVENPPPLTLEEALKVVKDA 203
Query: 671 FISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 775
F SA ER I+ GD + ILI+T G+++E F L++D
Sbjct: 204 FSSATERHIHVGDGLEILIVTKEGVRKEFFPLKRD 238
>UniRef50_P23724 Cluster: Proteasome component C5; n=23;
Fungi/Metazoa group|Rep: Proteasome component C5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 241
Score = 192 bits (467), Expect = 1e-47
Identities = 94/224 (41%), Positives = 141/224 (62%), Gaps = 9/224 (4%)
Frame = +2
Query: 131 QHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCW 310
+H+F PY DNGG+I+ IAG+D+AV+ DTR T +SI +R + K+F ++ V+ A G
Sbjct: 18 EHQFNPYGDNGGTILGIAGEDFAVLAGDTRNITDYSINSRYEPKVFDCGDNIVMSANGFA 77
Query: 311 CDTLTLTRLLQARMQMYEHEHN-KSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDG 487
D L + + ++ Y +HN K ++ + A+ + +LY KRFFPYYV ++AGLD DG
Sbjct: 78 ADGDALVKRFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLDEDG 137
Query: 488 KGCVYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNM-----QNVTEAP---LTRE 643
KG VYS+DP+G R RAGG+AA+ + P LDNQ+ KN + P L+ E
Sbjct: 138 KGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYEPGTNGKVKKPLKYLSVE 197
Query: 644 KALALLKDVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 775
+ + L++D F SA ER I GD + ILI+T G+++E +EL++D
Sbjct: 198 EVIKLVRDSFTSATERHIQVGDGLEILIVTKDGVRKEFYELKRD 241
>UniRef50_A3FQE7 Cluster: Proteasome subunit beta type; n=2;
Cryptosporidium|Rep: Proteasome subunit beta type -
Cryptosporidium parvum Iowa II
Length = 246
Score = 188 bits (459), Expect = 1e-46
Identities = 93/218 (42%), Positives = 134/218 (61%)
Frame = +2
Query: 122 GAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGAT 301
G +H F PY +NGGS VA+AGDD+ VI ADTRLS + I +R K +L+ +L +
Sbjct: 31 GKIEHSFNPYMNNGGSCVAVAGDDFVVIAADTRLSKMYRIASRSVSKTCQLTNKCILACS 90
Query: 302 GCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDS 481
G D L + L A++++YE EHNK+ + A+AQ+LS +LY KRFFPYY +L+GLD
Sbjct: 91 GMLADINALRKTLLAKVKLYEFEHNKTPSINAIAQLLSCILYSKRFFPYYSFCLLSGLDE 150
Query: 482 DGKGCVYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALL 661
GKG VY YD +G +H F A GS + + +LDNQI N + + + + ++
Sbjct: 151 QGKGVVYGYDAVGSFDQHKFVALGSGGSLITSILDNQISGNNQTSFES--IDKVGIINIV 208
Query: 662 KDVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 775
KD SA+ERD++TGDS +++I + GI LR+D
Sbjct: 209 KDSITSASERDVHTGDSAEVIVIDSSGISVSSLRLRED 246
>UniRef50_A0BPF5 Cluster: Chromosome undetermined scaffold_12, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_12,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 239
Score = 178 bits (434), Expect = 1e-43
Identities = 92/216 (42%), Positives = 130/216 (60%)
Frame = +2
Query: 128 KQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGC 307
K ++ PY DN G+++A+ ++ DTRLS G++I +RD KL +L++ VL G
Sbjct: 25 KSDQWSPYHDNSGTVLAVGIPGAVIVAGDTRLSNGYNILSRDATKLSQLTDKCVLATAGQ 84
Query: 308 WCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDG 487
+ D + L + LQ R+Q+YE ++ +T VA +LS LY +RFFPYY N+LAGLD +
Sbjct: 85 YADFIALRKFLQQRLQLYEFQNEVQASTETVAHLLSRELYSRRFFPYYTFNLLAGLDENN 144
Query: 488 KGCVYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKD 667
G VY YD IG + + GS + +LDNQ+ N N T P TRE+ L ++ D
Sbjct: 145 HGVVYGYDAIGSYDQMTYGVQGSGQELVVAVLDNQLKGYNKINKT-IPQTREEILDIILD 203
Query: 668 VFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 775
F AAERDI+TGD++ ILIITA G + LRKD
Sbjct: 204 CFSCAAERDIHTGDNVEILIITAAGTERIVKPLRKD 239
>UniRef50_A5K9H5 Cluster: Proteasome subunit beta type; n=1;
Plasmodium vivax|Rep: Proteasome subunit beta type -
Plasmodium vivax
Length = 241
Score = 178 bits (433), Expect = 2e-43
Identities = 86/213 (40%), Positives = 127/213 (59%)
Frame = +2
Query: 137 RFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCD 316
R+ PY DNGG+++ + G DY ++ ADTRLS +SIYTR K+ KL++ ++G++G D
Sbjct: 30 RWNPYVDNGGTVIGVTGKDYVILAADTRLSLSYSIYTRHCPKISKLTDKCIIGSSGMQSD 89
Query: 317 TLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGC 496
TL LL+ +++++ EH +A++L +LY +RFFPYY N+LAG+ +D KG
Sbjct: 90 IKTLHSLLKKKIELFVLEHAHYPDIHVIARLLCVILYSRRFFPYYTFNLLAGVSNDSKGV 149
Query: 497 VYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFI 676
+Y+YD IG GS +A + P+LDN++ KN Q + L +KD
Sbjct: 150 LYNYDAIGSYCEATHSCVGSGSALILPILDNRMEQKN-QLIKNLNFNLRDDLDFVKDAIT 208
Query: 677 SAAERDIYTGDSIYILIITAHGIQEEKFELRKD 775
SA ERDIYTGDS I II G+ EL++D
Sbjct: 209 SATERDIYTGDSTEIYIIDQMGVNTTSLELKQD 241
>UniRef50_Q4N2N3 Cluster: Proteasome beat subunit, putative; n=3;
Piroplasmida|Rep: Proteasome beat subunit, putative -
Theileria parva
Length = 218
Score = 177 bits (430), Expect = 4e-43
Identities = 87/215 (40%), Positives = 134/215 (62%)
Frame = +2
Query: 131 QHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCW 310
+ RF PY +NGG+++A ++YAVI ADTRLS + I+TR KLFKL++ +LG +G
Sbjct: 5 EERFNPYVNNGGTVIAATWNNYAVIAADTRLSQRYLIHTRFSTKLFKLTDKCILGTSGMQ 64
Query: 311 CDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGK 490
D L L +L+ ++++Y + HN+ T A+AQ+LST+LY +RFFPYY N+L G+D GK
Sbjct: 65 ADMLALQSVLERQIELYRYTHNREPTFNAIAQLLSTVLYGRRFFPYYTFNILCGIDEQGK 124
Query: 491 GCVYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDV 670
G V YD +G+ + A G++++ + +LDN + N Q V + E + L+K+
Sbjct: 125 GVVCGYDAVGNYNYEKYTAQGTSSSLVISVLDNLLN-GNNQKVKPEVNSLEDLVNLVKNA 183
Query: 671 FISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 775
+SA ERDI TGDS ++I ++ +LR D
Sbjct: 184 MVSAVERDICTGDSAELVICDGVVMEPVHMDLRID 218
>UniRef50_P34286 Cluster: Proteasome subunit beta type-1; n=2;
Caenorhabditis|Rep: Proteasome subunit beta type-1 -
Caenorhabditis elegans
Length = 258
Score = 176 bits (429), Expect = 5e-43
Identities = 90/219 (41%), Positives = 139/219 (63%), Gaps = 3/219 (1%)
Frame = +2
Query: 128 KQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTG-FSIYTRDQKKLFKLSESTVLGATG 304
++ R+ PY+ GGS AI+G+++A++ +DTR++ +I TRD +K+ L+++ +L +G
Sbjct: 40 ERQRWNPYSMEGGSTCAISGENFAIVASDTRMTQNDINILTRDAEKIQILNDNIILTTSG 99
Query: 305 CWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSD 484
+ D L L ++LQ+R+ Y ++ M+ A++LS LYY+RFFPYY +LAG+D
Sbjct: 100 FYGDVLQLKKVLQSRLHKYRFDYRSDMSVDLCAELLSRNLYYRRFFPYYTGAILAGIDEH 159
Query: 485 GKGCVYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAP-LTREKALALL 661
GKG V+SYDPIG R + A G+A + P LD QIG + E P LT ++A++L+
Sbjct: 160 GKGAVFSYDPIGCIERLGYSASGAAEPMIIPFLDCQIGHVTLSEGYERPELTLDRAISLM 219
Query: 662 KDVFISAAERDIYTGDSIYILIITAHGIQEEKF-ELRKD 775
KD F AAER+I TGD I+++I A KF LR+D
Sbjct: 220 KDSFRGAAEREISTGDKIHLVIAEAGKPVVVKFLPLRED 258
>UniRef50_UPI0000498367 Cluster: proteasome beta subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome beta
subunit - Entamoeba histolytica HM-1:IMSS
Length = 226
Score = 167 bits (406), Expect = 3e-40
Identities = 87/229 (37%), Positives = 139/229 (60%), Gaps = 1/229 (0%)
Frame = +2
Query: 92 NENFPEYAVPGAK-QHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLF 268
N+ F + V AK + ++ PY DN G+ V I G+D+ VI +DTR+S + I TR+ K++
Sbjct: 4 NKMFTQQPVREAKNKDQWSPYEDNCGTCVVIKGEDFVVIASDTRMSRDYMILTRNDSKIY 63
Query: 269 KLSESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPY 448
L+ V +G D LT ++A ++ Y++E+ K M+T +VAQ+LS LY RFFPY
Sbjct: 64 PLTSKCVFTGSGMRADIKELTDQIKAHIKNYKYENGKEMSTESVAQVLSNTLYSHRFFPY 123
Query: 449 YVSNVLAGLDSDGKGCVYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEA 628
Y ++LAG++S GK Y+YD +G + GS PLLD+ +++ TE
Sbjct: 124 YSFSLLAGINSKGKAVTYNYDAVGSFEERKYSCSGSGEELAYPLLDSL-----LKDRTE- 177
Query: 629 PLTREKALALLKDVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 775
PL ++A+ + +DV SA ERDI+TGD++ I+I+ ++GI++E + D
Sbjct: 178 PLGEQEAINIARDVMTSACERDIHTGDNVEIVILNSNGIRKEVHFMASD 226
>UniRef50_Q5B7I7 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 215
Score = 166 bits (404), Expect = 5e-40
Identities = 83/221 (37%), Positives = 133/221 (60%), Gaps = 4/221 (1%)
Frame = +2
Query: 125 AKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSE----STVL 292
AK+ RF PY NGG+ + ++G D+A++ DTR + G++I TR + K+F + + S V+
Sbjct: 2 AKETRFYPYTSNGGATLGVSGPDFAILAGDTRSTAGYNINTRYEPKVFTIQDARDRSIVI 61
Query: 293 GATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAG 472
G D L L A + MY+++H K++ A AQ +STMLY KRFFPY + ++AG
Sbjct: 62 SVIGFAADGRALKERLDAIVAMYKYQHGKNIGLRACAQRVSTMLYEKRFFPYQLQTMVAG 121
Query: 473 LDSDGKGCVYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKAL 652
+D+DG+G +Y YDP G + + A G A++ + P LD+Q +Q PL+ + A
Sbjct: 122 IDADGQGAIYYYDPAGCIEKRSHCAAGEASSLMLPFLDSQ--APRLQ-----PLSLQTAQ 174
Query: 653 ALLKDVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 775
L++D + A ER I GD + +L++T G+ E+ +L+KD
Sbjct: 175 QLVRDAYTGATERHIEVGDHLQMLVVTREGVSEQLVDLKKD 215
>UniRef50_UPI000150A719 Cluster: Proteasome A-type and B-type family
protein; n=1; Tetrahymena thermophila SB210|Rep:
Proteasome A-type and B-type family protein -
Tetrahymena thermophila SB210
Length = 247
Score = 165 bits (402), Expect = 9e-40
Identities = 86/219 (39%), Positives = 127/219 (57%), Gaps = 2/219 (0%)
Frame = +2
Query: 125 AKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATG 304
AK++ F PY N G++ AIA D+ ++ D R+S G+SI +RD KL +L+++ L +G
Sbjct: 31 AKRNEFNPYVFNAGTVCAIAHGDFVIVAGDKRISQGYSIVSRDISKLARLTDNVFLATSG 90
Query: 305 CWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSD 484
+ D L++ L AR+ MY++ + K A+A +LS LYYKRFFPYY N+LAG D
Sbjct: 91 MYADFAALSKQLSARLHMYKYNNGKQANMRAIASLLSRTLYYKRFFPYYTFNLLAGFDDK 150
Query: 485 GKGCVYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQI-GLKNMQNVTEAPLTREKALALL 661
G+G V +YD +G + GS A + P+ D G ++ E T E+ ++ +
Sbjct: 151 GEGLVINYDAVGSGDFKKYAVLGSGAQLITPVFDQYFEGYNKIKK--EQLHTVEEFISFI 208
Query: 662 KDVFISAAERDIYTGDSIYILIITAHGIQE-EKFELRKD 775
D F SA ERDIYTGD + I+I+ E + F LRKD
Sbjct: 209 VDCFESATERDIYTGDQLEIVILRKDKAPEYQLFPLRKD 247
>UniRef50_A2F716 Cluster: Proteasome subunit beta type; n=1;
Trichomonas vaginalis G3|Rep: Proteasome subunit beta
type - Trichomonas vaginalis G3
Length = 224
Score = 165 bits (401), Expect = 1e-39
Identities = 77/213 (36%), Positives = 131/213 (61%)
Frame = +2
Query: 128 KQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGC 307
K+ ++ PY +GG+ + I GDDY VIGADTRLS +SI +R + ++FK++ + ++ ATG
Sbjct: 9 KKGQWSPYEMHGGTAIGICGDDYVVIGADTRLSVDYSIDSRHKARIFKMNSNCMISATGF 68
Query: 308 WCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDG 487
D +++ + YE++H M+ +VA+ +S LY KRFFPYY++ ++ G++S+G
Sbjct: 69 DGDIDAFITRMRSILLNYENQHFHEMSVESVARCVSNTLYSKRFFPYYINILVGGINSEG 128
Query: 488 KGCVYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKD 667
KG +Y YDP+G ++ + GS ++ PLLD+ G + ++ + A +++D
Sbjct: 129 KGKLYGYDPVGTIEDLHYDSNGSGSSLAAPLLDSAFGTIHHNTRPFPAVSLQDAKNIVRD 188
Query: 668 VFISAAERDIYTGDSIYILIITAHGIQEEKFEL 766
S ERDIYTGD++ + + T G +E+F L
Sbjct: 189 AICSVTERDIYTGDALQLCVFTKDGFAQEEFPL 221
>UniRef50_Q4YMY0 Cluster: Proteasome subunit beta type; n=5;
Plasmodium|Rep: Proteasome subunit beta type -
Plasmodium berghei
Length = 267
Score = 158 bits (384), Expect = 1e-37
Identities = 89/258 (34%), Positives = 139/258 (53%), Gaps = 25/258 (9%)
Frame = +2
Query: 77 KMLSVNENFPEYAVPGAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQ 256
K NE E+A P R+ PY DNGG+++ + G++Y ++ DTRLS +SIYTR+
Sbjct: 14 KKTEENEAAIEHARPSK---RWNPYIDNGGTVIGLTGNNYVILAGDTRLSLSYSIYTRNC 70
Query: 257 KKLFKLSESTVLGATGCWCDTLTL-------------------------TRLLQARMQMY 361
K+ K+++ ++G++G D TL +++LQ ++Q++
Sbjct: 71 PKISKITDKCIIGSSGMQSDIKTLHSLLQVLLKIFLLYNYYCCNLIIFFSKILQKKIQLF 130
Query: 362 EHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCARHNF 541
EH+ + +A++L LY +RFFPYY N+LAG+D +GKG +YSYD IG +
Sbjct: 131 YLEHSHYPSIHVIAKLLCVTLYSRRFFPYYTFNILAGIDENGKGVLYSYDAIGSYYQSTH 190
Query: 542 RAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERDIYTGDSIYI 721
GS ++ + P+LDN++ KN Q + + +KD SA ERDIYTGD I
Sbjct: 191 ACTGSGSSLILPILDNRVEQKN-QLIKNMDFNLRDDINFVKDAMTSATERDIYTGDKAEI 249
Query: 722 LIITAHGIQEEKFELRKD 775
II GI +L++D
Sbjct: 250 YIIDNLGINTTLLDLKQD 267
>UniRef50_Q8SRH6 Cluster: 20S PROTEASOME ALPHA-TYPE SUBUNIT; n=1;
Encephalitozoon cuniculi|Rep: 20S PROTEASOME ALPHA-TYPE
SUBUNIT - Encephalitozoon cuniculi
Length = 290
Score = 147 bits (356), Expect = 3e-34
Identities = 79/215 (36%), Positives = 122/215 (56%)
Frame = +2
Query: 131 QHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCW 310
+ RF+PY DN G+ + + D+ V+ DTR S+ I +R+ K+F++ + + G TG +
Sbjct: 80 KERFDPYEDNSGTTICLKQGDFIVVAGDTRHSSSMVINSREMSKIFQVGDFLLTG-TGFY 138
Query: 311 CDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGK 490
DT + + ++ YE + S+ + A +LS +LY KRFFPYY VL+G + GK
Sbjct: 139 ADTHEVYVKMVYEIRQYEVDD--SINIHSAANLLSKILYSKRFFPYYSFCVLSGFEK-GK 195
Query: 491 GCVYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDV 670
VYSYDPIG GS + +QPLLD+ I KN N E L++E + L+
Sbjct: 196 PYVYSYDPIGSFGSVTCVCSGSGRSMIQPLLDSFIDKKNWNNAEETQLSQEDCIRLVVKA 255
Query: 671 FISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 775
F SAAERD+ T D++ + ++ + + E F LR+D
Sbjct: 256 FNSAAERDVKTKDNLEVCVMRENQVMRETFPLRRD 290
>UniRef50_UPI0000E48A2E Cluster: PREDICTED: similar to 20S
proteasome beta 6 subunit; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to 20S proteasome
beta 6 subunit - Strongylocentrotus purpuratus
Length = 165
Score = 127 bits (307), Expect = 3e-28
Identities = 58/97 (59%), Positives = 75/97 (77%)
Frame = +2
Query: 485 GKGCVYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLK 664
GKGCVYS+DP+G R +RA GS++A LQPLLDNQIG KN + + P+ +KA+AL+K
Sbjct: 69 GKGCVYSFDPVGSYERETYRAAGSSSALLQPLLDNQIGGKNQEGWVKEPIPVDKAVALVK 128
Query: 665 DVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 775
DVFISAAERDIYTGD I + ++T G +EE+F LR+D
Sbjct: 129 DVFISAAERDIYTGDGIVLHVLTKDGCKEERFPLRRD 165
Score = 72.9 bits (171), Expect = 9e-12
Identities = 34/61 (55%), Positives = 44/61 (72%)
Frame = +2
Query: 92 NENFPEYAVPGAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFK 271
+E P Y +Q RF PY NGG+I+A+AGDDYA+I +DTRLS GFSI+TRD K ++
Sbjct: 8 HETVPSYHP--VEQQRFNPYTFNGGTIMAMAGDDYAIIASDTRLSEGFSIHTRDSPKNYR 65
Query: 272 L 274
L
Sbjct: 66 L 66
>UniRef50_Q98RS2 Cluster: Proteasome subunit beta type; n=1;
Guillardia theta|Rep: Proteasome subunit beta type -
Guillardia theta (Cryptomonas phi)
Length = 239
Score = 116 bits (280), Expect = 5e-25
Identities = 67/230 (29%), Positives = 124/230 (53%), Gaps = 1/230 (0%)
Frame = +2
Query: 89 VNENFPEYAVPGAKQHR-FEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKL 265
+N N Y + +R F+PY +NGG ++AI G+ + V+ +DTR+S G+SI +R ++
Sbjct: 12 LNFNIKTYNLNFKSLNRNFDPYQNNGGLVLAITGNKFCVMASDTRISMGYSIPSRLNLRI 71
Query: 266 FKLSESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFP 445
K+S +LG++G D L + L+ + ++ +N + + + S++LY +RFFP
Sbjct: 72 LKISNLCLLGSSGMISDINILHQKLRNEIFRLKYLNNTELNLNGIVYLTSSLLYSRRFFP 131
Query: 446 YYVSNVLAGLDSDGKGCVYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTE 625
+Y N+L G++ GK Y+YD IG ++ G+ + Q ++D I + + N
Sbjct: 132 FYTFNILTGINELGKASNYTYDAIGSFDCNHASTVGNCQSSAQCIMD-YIEERKIPNDRN 190
Query: 626 APLTREKALALLKDVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 775
T + ++L+K +F + + + GD + + I++ GI E LR D
Sbjct: 191 YK-TILQVVSLIKIIFSTLCNKQVDMGDILQLFIVSKKGILVENSILRLD 239
>UniRef50_A1RX71 Cluster: Proteasome endopeptidase complex; n=1;
Thermofilum pendens Hrk 5|Rep: Proteasome endopeptidase
complex - Thermofilum pendens (strain Hrk 5)
Length = 204
Score = 106 bits (255), Expect = 6e-22
Identities = 64/202 (31%), Positives = 113/202 (55%), Gaps = 1/202 (0%)
Frame = +2
Query: 164 GSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLLQ 343
G+ V I D V+ A+ R+S G + ++ KK++++ + + + G D TL R+++
Sbjct: 6 GTTVGIRVSDGVVLAAEKRVSYGLYLMSKSGKKVYRILDKMGMASAGLMADMQTLARIVE 65
Query: 344 ARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGH 523
A M++YE + N S VA++LS +LY +R FPYY V+ GLD +G +YS DPIG
Sbjct: 66 AEMRLYELDSNISPKVWTVAKLLSYILYERRLFPYYAEIVVGGLDEEGSH-LYSLDPIGA 124
Query: 524 CARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALAL-LKDVFISAAERDIY 700
++ A GS Q+ + +++ + ++ ++AL+L LK V+ +A +RD
Sbjct: 125 IIEDDYVALGSG---------TQLAISIVESNYKKDMSLDEALSLALKSVY-AAMKRDAA 174
Query: 701 TGDSIYILIITAHGIQEEKFEL 766
+GD + +L+I G E+ + L
Sbjct: 175 SGDGVDVLVIGKSGTLEKTYPL 196
>UniRef50_Q9N9W8 Cluster: Proteasome subunit beta type-3; n=2;
Giardia intestinalis|Rep: Proteasome subunit beta type-3
- Giardia lamblia (Giardia intestinalis)
Length = 207
Score = 103 bits (248), Expect = 4e-21
Identities = 57/198 (28%), Positives = 108/198 (54%), Gaps = 3/198 (1%)
Frame = +2
Query: 158 NGGSIVAIAGDDYAVIGADTRLSTGFSIYT-RDQKKLFKLSESTVLGATGCWCDTLTLTR 334
NG +++ I G D + AD RL + T +++++F+LS+S +LG G D LT R
Sbjct: 8 NGSALIGIKGXDCVALAADKRLGCSYQTLTIGNEERIFRLSQSCLLGLAGLQTDVLTTYR 67
Query: 335 LLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDP 514
++ + +Y + ++ + A A+M+S+ LY RF PY++S ++AG ++DGK + + D
Sbjct: 68 QIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPIIAGFEADGKPYLGAMDT 127
Query: 515 IGHCARH--NFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAE 688
IG C NF+ G+A+ L L + + + ++ ++ L L++ + SA
Sbjct: 128 IG-CLDDCTNFQIAGTASDFLLGLCETHV---------KPDMSEDEILPLMEQIIRSATN 177
Query: 689 RDIYTGDSIYILIITAHG 742
RD Y+G +++++ G
Sbjct: 178 RDAYSGWGAHVVVLRRDG 195
>UniRef50_Q41941 Cluster: Proteasome subunit RC5 like; n=2; core
eudicotyledons|Rep: Proteasome subunit RC5 like -
Arabidopsis thaliana (Mouse-ear cress)
Length = 85
Score = 97.9 bits (233), Expect = 3e-19
Identities = 40/74 (54%), Positives = 56/74 (75%)
Frame = +2
Query: 332 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYD 511
++L++R +Y+H+HNK M+ PA+AQ+LS LY+KRFFPYY NVL GLD +GKGCV++YD
Sbjct: 1 KVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDEEGKGCVFTYD 60
Query: 512 PIGHCARHNFRAGG 553
+G R + A G
Sbjct: 61 AVGSYERVGYGAQG 74
>UniRef50_A2BN24 Cluster: Proteasome beta subunit; n=2;
Desulfurococcales|Rep: Proteasome beta subunit -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 204
Score = 97.5 bits (232), Expect = 4e-19
Identities = 55/190 (28%), Positives = 107/190 (56%)
Frame = +2
Query: 161 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLL 340
G + V I G Y V+ A+ R+S G I ++ +K++K+++ L G + D ++++L
Sbjct: 8 GATAVGIRGAGYVVLAAEKRVSYGGFIISKTARKVYKITDYLGLALAGLFADLQAISKIL 67
Query: 341 QARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG 520
+A ++ Y + ++ AVA++L+T+LY +++P+ ++ GL++DG +Y DP+G
Sbjct: 68 RAEIEYYNIVTGRRISVRAVARLLATILYSYKYYPFLSETLVGGLEADGTAKLYVMDPLG 127
Query: 521 HCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERDIY 700
++ A GS A +L+N G +V +A ++ A+A ++ +A ERD
Sbjct: 128 SLIEDDYAAIGSGAPIAIGILEN--GYSKDMSVDDA---KKLAIAAVR----AAIERDAM 178
Query: 701 TGDSIYILII 730
+GD I +L+I
Sbjct: 179 SGDGIDLLVI 188
>UniRef50_UPI0000E46471 Cluster: PREDICTED: similar to proteasome
subunit beta-type; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to proteasome subunit
beta-type - Strongylocentrotus purpuratus
Length = 104
Score = 91.9 bits (218), Expect = 2e-17
Identities = 56/131 (42%), Positives = 75/131 (57%)
Frame = +2
Query: 383 MTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCARHNFRAGGSAA 562
M T A+A MLST+LYY+RFFPYY +N AG
Sbjct: 1 MFTSAIAAMLSTILYYRRFFPYYT--------------------------YNILAGLDEE 34
Query: 563 AQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERDIYTGDSIYILIITAHG 742
+L P + + IG KN + + P+ +KA+AL+KDVFISAAERDIYTGD I + ++T G
Sbjct: 35 GEL-PTISSGIGGKNQEGWVKEPIPVDKAVALVKDVFISAAERDIYTGDGIVLHVLTKDG 93
Query: 743 IQEEKFELRKD 775
+EE+F LR+D
Sbjct: 94 CKEERFPLRRD 104
>UniRef50_Q9YES4 Cluster: Proteasome beta subunit; n=1; Aeropyrum
pernix|Rep: Proteasome beta subunit - Aeropyrum pernix
Length = 203
Score = 91.9 bits (218), Expect = 2e-17
Identities = 55/194 (28%), Positives = 101/194 (52%)
Frame = +2
Query: 161 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLL 340
G + + I +D V+ AD R+S G I +R+ KK+F +++ + G + D L R++
Sbjct: 5 GATALGIRVEDGVVLAADKRMSYGGFILSRNFKKIFVINDRIGIAFAGLYGDMGGLVRIV 64
Query: 341 QARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG 520
+ +M++ E K T VA+ LS++LY +FFP+ V ++ G+D G+ +Y DP+G
Sbjct: 65 EGQMRLASLETGKPATVRNVAKFLSSLLYSYKFFPFNVEAIVGGIDPGGEPKLYVLDPLG 124
Query: 521 HCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERDIY 700
++ A G+ A GL +++V + ++ E+A + ++ RD
Sbjct: 125 SIIEEDYVAAGTGAT-------TAFGL--LEHVYKRGMSLEEAKKAAVEALRASMARDAG 175
Query: 701 TGDSIYILIITAHG 742
TGD I +L++ G
Sbjct: 176 TGDGIDVLVLPVSG 189
>UniRef50_Q8ZST5 Cluster: Proteasome, beta subunit; n=5;
Thermoproteaceae|Rep: Proteasome, beta subunit -
Pyrobaculum aerophilum
Length = 203
Score = 91.5 bits (217), Expect = 2e-17
Identities = 57/203 (28%), Positives = 105/203 (51%)
Frame = +2
Query: 161 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLL 340
G + V I D V+ A+ R+S GF + KK+F + + + + G D TL ++L
Sbjct: 8 GATAVGIKAKDGVVLAAEKRVSYGFYTLSSAGKKVFVIDDKLAIASAGIIADMQTLAKIL 67
Query: 341 QARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG 520
+ + YE E + +T ++A++LS +++ +RF P++ ++ G+D +G + DP+G
Sbjct: 68 KLNAKAYELEMKRKPSTHSMARLLSVIMFSRRFMPFFAEVLVGGIDEEGPHLIV-MDPLG 126
Query: 521 HCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERDIY 700
N+ A G+ A +LD G + V EA ++ A+ LK +A ERD
Sbjct: 127 SLIEDNYAALGTGAKLAVAVLDT--GYRPDITVEEA---KKLAVQALK----AAIERDPV 177
Query: 701 TGDSIYILIITAHGIQEEKFELR 769
+G I + I+ +G +EE+ ++
Sbjct: 178 SGGGIDLAIVDKNGAREEEVRVQ 200
>UniRef50_Q980L4 Cluster: Proteasome subunit; n=4;
Sulfolobaceae|Rep: Proteasome subunit - Sulfolobus
solfataricus
Length = 196
Score = 89.0 bits (211), Expect = 1e-16
Identities = 57/196 (29%), Positives = 101/196 (51%)
Frame = +2
Query: 173 VAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLLQARM 352
V + +D V+ ++ RLS G + ++ KK++K+++ + GA G + D TLTR++ +
Sbjct: 9 VGLKVNDGIVLASERRLSYGGYVLSKQAKKVYKINKFLMAGA-GIYGDLQTLTRIMNVEI 67
Query: 353 QMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCAR 532
+ YE K ++ A A++LS +LY + P+ + G+D G +Y DPIG
Sbjct: 68 KYYEVSTGKPISVHAAAKLLSVILYQYKVMPFISEILFGGVDEKGPQ-LYVLDPIGSLIE 126
Query: 533 HNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERDIYTGDS 712
N+ A GS A +I + +++ + ++ + A L+ ++ ERDI +GD
Sbjct: 127 DNYAAVGSGA---------RIAIGVLESEYDPNMSLDVATQLITKAIKASIERDITSGDG 177
Query: 713 IYILIITAHGIQEEKF 760
I + II G E KF
Sbjct: 178 IDLAIIDKKGNYENKF 193
>UniRef50_Q5CU29 Cluster: Possible proteasome component; n=2;
Cryptosporidium|Rep: Possible proteasome component -
Cryptosporidium parvum Iowa II
Length = 204
Score = 88.2 bits (209), Expect = 2e-16
Identities = 55/208 (26%), Positives = 103/208 (49%), Gaps = 2/208 (0%)
Frame = +2
Query: 158 NGGSIVAIAGDDYAVIGADTRL-STGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTR 334
NGG+I+A+ G + D RL S G+ + D K+ + S T++G +G D TLT
Sbjct: 6 NGGAILAMKGKECVAFATDMRLGSNGYRTISTDFDKVIRPSSKTLMGFSGLATDIHTLTN 65
Query: 335 LLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDP 514
L++ + +Y + + A++ M +++LY KRF PY+V ++AGLD++ + YD
Sbjct: 66 LIKFKTNLYHLREEREIGVKALSHMTASILYSKRFSPYFVEPIVAGLDNNNVPFIAGYDL 125
Query: 515 IGHCA-RHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAER 691
IG + F G+A DNQ+ ++ L ++ + ++ +S +R
Sbjct: 126 IGCLSVCSEFAISGTA--------DNQL-FGICESYYRPDLEPDELMEIVSQCMLSGIDR 176
Query: 692 DIYTGDSIYILIITAHGIQEEKFELRKD 775
D ++G + ++T + + + R D
Sbjct: 177 DAFSGWGCKVYLLTPEKLVTKTLKSRMD 204
>UniRef50_Q01FQ8 Cluster: Proteasome subunit beta type; n=1;
Ostreococcus tauri|Rep: Proteasome subunit beta type -
Ostreococcus tauri
Length = 203
Score = 87.8 bits (208), Expect = 3e-16
Identities = 50/117 (42%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
Frame = +2
Query: 173 VAIAGDDYAVIGADTRLSTGFSIYTR-DQKKLFKLSESTVLGATGCWCDTLTLTRLLQAR 349
VA+ G D I +D RL + T D KL K+ + LG TG D LTL + L+ +
Sbjct: 10 VAMVGKDCVAIASDLRLGINQNQTTAVDYSKLHKIHDKLWLGLTGLIADQLTLAQKLRFK 69
Query: 350 MQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG 520
MYE N+ M+ A ++ST LY KRF PYY V+AGLD DGK + S D IG
Sbjct: 70 HDMYELRENRVMSPKVFASVVSTTLYEKRFQPYYTEPVVAGLDKDGKPYITSMDLIG 126
>UniRef50_Q9V0N9 Cluster: Proteasome subunit beta precursor; n=4;
Thermococcaceae|Rep: Proteasome subunit beta precursor -
Pyrococcus abyssi
Length = 207
Score = 87.8 bits (208), Expect = 3e-16
Identities = 57/197 (28%), Positives = 92/197 (46%)
Frame = +2
Query: 161 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLL 340
G + V I D V+ AD R S G +Y ++ K+ K+ E + G D L L RLL
Sbjct: 10 GTTTVGIVCSDGVVLAADRRASLGNIVYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLL 69
Query: 341 QARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG 520
+A ++Y + K M+ A+A +L+ ML R PY ++ G D K +YS D +G
Sbjct: 70 RAEAKLYYAQSGKRMSVKALATLLANMLNGARMLPYLAWFLVGGFDE--KPRLYSVDMMG 127
Query: 521 HCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERDIY 700
+ A GS +LD++ L + + + + SA +RD++
Sbjct: 128 GITEDKYVAAGSGMEFAYSVLDSEY---------REDLKVREGIKIAVEAINSAIKRDVF 178
Query: 701 TGDSIYILIITAHGIQE 751
+GD I ++ IT G +E
Sbjct: 179 SGDGIMVVTITEEGYRE 195
>UniRef50_A2BN27 Cluster: Proteasome beta; n=3;
Desulfurococcales|Rep: Proteasome beta - Hyperthermus
butylicus (strain DSM 5456 / JCM 9403)
Length = 212
Score = 85.8 bits (203), Expect = 1e-15
Identities = 63/224 (28%), Positives = 104/224 (46%)
Frame = +2
Query: 119 PGAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGA 298
PG Q R A G + V I D+ V+ AD R + G+ + + KK+ K+++ +
Sbjct: 5 PGTGQLR----ALKGTTTVGIVFRDFVVLAADRRATAGYFVAHKRTKKIIKITDYMAMTT 60
Query: 299 TGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLD 478
G D L L YE + + M+ A AQ LS +L+ +F+PY V +L G D
Sbjct: 61 AGLVADAQMLAEWLANHTHYYEIVNKRRMSIHAAAQYLSIILHSAKFYPYIVQLLLGGYD 120
Query: 479 SDGKGCVYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALAL 658
+ + +Y+ D G + A GS + ++++Q L+ E+A+ L
Sbjct: 121 TQPR--LYNIDWFGSVTEEKYVATGSGSPTAIGVIEDQYSPN---------LSMEEAVEL 169
Query: 659 LKDVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD*FVTK 790
K S+ RD +TG+ + +++I +E FEL KD TK
Sbjct: 170 AKRAVASSIRRDTFTGNGVDVVVIGKDFYREYSFEL-KDILKTK 212
>UniRef50_Q4U969 Cluster: Proteasome subunit beta type; n=3;
Aconoidasida|Rep: Proteasome subunit beta type -
Theileria annulata
Length = 220
Score = 85.0 bits (201), Expect = 2e-15
Identities = 45/140 (32%), Positives = 75/140 (53%), Gaps = 2/140 (1%)
Frame = +2
Query: 158 NGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQ-KKLFKLSESTVLGATGCWCDTLTLTR 334
NGG++VA+ G+ I D RL + K FK++ES A+G D TL
Sbjct: 22 NGGALVAMMGEGCVAIACDKRLGLNQQVTVSSNFPKAFKVTESCFFAASGLATDVQTLKD 81
Query: 335 LLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDP 514
+ ++ MY+ +K M+ ++ M+ +MLY +RF P++V +V+AGLD+D + +D
Sbjct: 82 EIMFKVNMYKLRGDKEMSVKTLSNMVGSMLYSRRFGPWFVDSVIAGLDTDSSPYITCFDL 141
Query: 515 IG-HCARHNFRAGGSAAAQL 571
+G C +F G+ + QL
Sbjct: 142 VGAPCTPTDFVVAGTCSEQL 161
>UniRef50_Q5AF53 Cluster: Putative uncharacterized protein PRE7;
n=1; Candida albicans|Rep: Putative uncharacterized
protein PRE7 - Candida albicans (Yeast)
Length = 127
Score = 85.0 bits (201), Expect = 2e-15
Identities = 38/106 (35%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
Frame = +2
Query: 131 QHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCW 310
+HRF PY+DNGG+++ IAG+D+AV+ DTR G+SI +R + K+ + + ++ A G
Sbjct: 22 EHRFNPYSDNGGTVLGIAGEDFAVLAGDTRQVEGYSIQSRYESKIHDVGDDILMTANGFA 81
Query: 311 CDTLTLTRLLQARMQMYEHEHN-KSMTTPAVAQMLSTMLYYKRFFP 445
D + L + + Y+ ++N K + + A+ + +LY KRFFP
Sbjct: 82 ADGVALIDRFKQSLIWYKFDNNGKKLAIKSAARYIQQLLYGKRFFP 127
>UniRef50_Q8GZE1 Cluster: Beta 3 subunit of 20S proteasome; n=1;
Pyrocystis lunula|Rep: Beta 3 subunit of 20S proteasome
- Pyrocystis lunula (Dinoflagellate)
Length = 214
Score = 84.6 bits (200), Expect = 3e-15
Identities = 46/140 (32%), Positives = 78/140 (55%), Gaps = 2/140 (1%)
Frame = +2
Query: 158 NGGSIVAIAGDDYAVIGADTRLSTG-FSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTR 334
NG +IVA+AGD I +DTR ++K F+L++ T +G G D T+ +
Sbjct: 8 NGSAIVAMAGDGCVGIASDTRYGVRQLQTVGCQRQKTFQLTDQTFVGIAGLATDVQTMAQ 67
Query: 335 LLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDP 514
LL R++++ ++M V ++S++LY KRF PY+ V+AGLD D + ++D
Sbjct: 68 LLDFRIKLFSLREERTMQPQTVGNLISSILYEKRFGPYFTEPVVAGLDKDHNPFLCAFDF 127
Query: 515 IGHCAR-HNFRAGGSAAAQL 571
IG ++ +F G+++ QL
Sbjct: 128 IGAMSKAQDFVVSGTSSEQL 147
>UniRef50_P49720 Cluster: Proteasome subunit beta type-3; n=85;
Eukaryota|Rep: Proteasome subunit beta type-3 - Homo
sapiens (Human)
Length = 205
Score = 83.8 bits (198), Expect = 5e-15
Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 2/208 (0%)
Frame = +2
Query: 158 NGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRL 337
NGG+++A+ G + I AD R + T D +K+F + + +G G D T+ +
Sbjct: 7 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 66
Query: 338 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLD-SDGKGCVYSYDP 514
L+ R+ +YE + + + + M++ +LY KRF PYY V+AGLD K + S D
Sbjct: 67 LKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDL 126
Query: 515 IG-HCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAER 691
IG +F G+ A Q+ + +++ E + + + ++A +R
Sbjct: 127 IGCPMVTDDFVVSGTCAEQMYGM---------CESLWEPNMDPDHLFETISQAMLNAVDR 177
Query: 692 DIYTGDSIYILIITAHGIQEEKFELRKD 775
D +G + + II I + R D
Sbjct: 178 DAVSGMGVIVHIIEKDKITTRTLKARMD 205
>UniRef50_Q86E06 Cluster: Proteasome subunit beta type; n=3;
Schistosoma japonicum|Rep: Proteasome subunit beta type
- Schistosoma japonicum (Blood fluke)
Length = 209
Score = 83.0 bits (196), Expect = 8e-15
Identities = 46/142 (32%), Positives = 71/142 (50%), Gaps = 2/142 (1%)
Frame = +2
Query: 152 ADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLT 331
A NG +++ ++G D A I D R + D K++ L +G G D T+
Sbjct: 5 AHNGSAVIGMSGKDCAAIACDLRFGVNLQTISTDFTKVYSLGPRLYVGFPGLATDNQTVF 64
Query: 332 RLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLD-SDGKGCVYSY 508
+ LQ R MYE N+++ + MLS +LY +RF PY+V V+AG+D + K V
Sbjct: 65 QRLQFRKNMYELRENRTIKPQTITTMLSNLLYERRFGPYFVEPVVAGIDHTTSKPYVACM 124
Query: 509 DPIG-HCARHNFRAGGSAAAQL 571
D IG C ++F G+ Q+
Sbjct: 125 DLIGCVCEANDFVVSGTCTEQM 146
>UniRef50_A5K9T5 Cluster: Proteasome subunit beta type; n=8;
Eukaryota|Rep: Proteasome subunit beta type - Plasmodium
vivax
Length = 218
Score = 83.0 bits (196), Expect = 8e-15
Identities = 60/220 (27%), Positives = 106/220 (48%), Gaps = 14/220 (6%)
Frame = +2
Query: 158 NGGSIVAIAGDDYAVIGADTRL-STGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTR 334
NGG ++ ++G I D RL + F+ + + K+FK+++ +G +G D TL
Sbjct: 8 NGGCVLGMSGAQCVAIACDLRLGANNFTTVSTNFTKIFKMNDYVYVGLSGLATDIQTLYE 67
Query: 335 LLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAG------LDSDGKG- 493
LL+ R+ +YE M A MLS++LY RF PY+V+ ++ G LD +GK
Sbjct: 68 LLRYRVNLYEIRQETPMDIDCFANMLSSILYANRFSPYFVNPIVVGFRVQHTLDDEGKKV 127
Query: 494 CVY-----SYDPIG-HCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALA 655
C + +YD IG C +F G + QL + ++ + +K+ ++
Sbjct: 128 CSFEPYLTAYDLIGAKCETKDFVVNGVTSEQLYGMCES-LYIKDQD--------KDGLFE 178
Query: 656 LLKDVFISAAERDIYTGDSIYILIITAHGIQEEKFELRKD 775
+ +SA +RD +G + ++T I ++K + R D
Sbjct: 179 TISQCLLSALDRDCLSGWGAEVYVLTPDTIMKKKLKARMD 218
>UniRef50_Q23237 Cluster: Proteasome subunit beta type-3; n=3;
Bilateria|Rep: Proteasome subunit beta type-3 -
Caenorhabditis elegans
Length = 204
Score = 83.0 bits (196), Expect = 8e-15
Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 1/206 (0%)
Frame = +2
Query: 161 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLL 340
GG++VA+AGD+ I +D R+ + DQKK+ K+++ +G G D T+ +
Sbjct: 8 GGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDARTVLEKI 67
Query: 341 QARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG 520
R +YE N+++ +++M+S + Y RF Y+ ++AGLD K + D IG
Sbjct: 68 MFRKNLYELRENRNIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDTNKPYICCMDTIG 127
Query: 521 -HCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERDI 697
A +F A G+ L + +N +N+ L A ++L S ERD
Sbjct: 128 CVSAPRDFVAVGTGQEYLLGVCENFW----RENMKPDELFEATAQSIL-----SCLERDA 178
Query: 698 YTGDSIYILIITAHGIQEEKFELRKD 775
+G + IT + + R D
Sbjct: 179 ASGWGAVVYTITKDKVNVSTIKARMD 204
>UniRef50_Q9YER0 Cluster: Proteasome beta subunit; n=1; Aeropyrum
pernix|Rep: Proteasome beta subunit - Aeropyrum pernix
Length = 219
Score = 82.6 bits (195), Expect = 1e-14
Identities = 54/201 (26%), Positives = 96/201 (47%)
Frame = +2
Query: 158 NGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRL 337
+G + V + D+ ++ AD R + GF I +R KK+ LS + +G D L+ +
Sbjct: 24 SGTTTVGLIASDHVILAADKRATAGFLIASRRVKKIVMLSNYVAMTVSGLVADAQILSDV 83
Query: 338 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPI 517
L+ +++YE + + VA +LS +L+ +FFPY V ++ G D+ + +Y+ D
Sbjct: 84 LREEIRLYEMTNKVKPSVRFVASLLSNILFSSKFFPYIVQLIVGGYDTQPR--LYTLDLF 141
Query: 518 GHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERDI 697
G + A GS + +L+ + L+ E+A+ + SA RD
Sbjct: 142 GSITEDKYTATGSGSPIAYGVLEERY---------REDLSVEEAIKVATTAIRSAVLRDA 192
Query: 698 YTGDSIYILIITAHGIQEEKF 760
+GD +++I G EEKF
Sbjct: 193 ASGDGADVVVIGPQG-YEEKF 212
>UniRef50_Q9LST7 Cluster: Proteasome subunit beta type-3; n=10;
Viridiplantae|Rep: Proteasome subunit beta type-3 -
Oryza sativa subsp. japonica (Rice)
Length = 204
Score = 80.6 bits (190), Expect = 4e-14
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 1/207 (0%)
Frame = +2
Query: 158 NGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRL 337
NG ++VA+ G + I +D RL D +++FK+ + +G +G D TL +
Sbjct: 7 NGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHDKLYIGLSGLATDAQTLYQR 66
Query: 338 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPI 517
L R ++Y+ + M A ++S +LY KRF PY+ V+AGL D + + + D I
Sbjct: 67 LVFRHKLYQLREERDMKPQTFASLVSALLYEKRFGPYFCQPVIAGLGEDNEPFICTMDCI 126
Query: 518 G-HCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERD 694
G +F G+A+ L ++ NM+ E+ + S+ +RD
Sbjct: 127 GAKELAKDFVVSGTASESLYGACESMY-KPNME--------PEELFETISQALQSSVDRD 177
Query: 695 IYTGDSIYILIITAHGIQEEKFELRKD 775
+G ++L++T ++E + R D
Sbjct: 178 CLSGWGGFVLLVTPTEVKECVIKGRMD 204
>UniRef50_UPI000049A243 Cluster: proteasome beta subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome beta
subunit - Entamoeba histolytica HM-1:IMSS
Length = 205
Score = 79.4 bits (187), Expect = 1e-13
Identities = 47/206 (22%), Positives = 94/206 (45%)
Frame = +2
Query: 158 NGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRL 337
+GG++V +AG I AD R + + + K+F++++ + G G + D T+
Sbjct: 9 SGGAVVGMAGKGCVAIAADNRYGLKYQFASANFHKVFQVNKYCLFGGAGLFSDVQTMAEK 68
Query: 338 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPI 517
++ +Y + + + MLY KRF PYY+S ++AG+D +G V SYD I
Sbjct: 69 VKYHANLYRLREGHDIGPEQLLNSTAHMLYKKRFQPYYMSPIIAGIDDNGNSYVCSYDYI 128
Query: 518 GHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERDI 697
G G+ + +L + D + + + E+ + + ++A RD
Sbjct: 129 GSPEISQVGCVGTGSNELMGMCD---------SFYKEGMEPEELVEAVGQCLLAAENRDA 179
Query: 698 YTGDSIYILIITAHGIQEEKFELRKD 775
++G + + ++T + + R+D
Sbjct: 180 FSGWGVEVYLLTRDNLTIYNMKPRQD 205
>UniRef50_Q58634 Cluster: Proteasome subunit beta precursor; n=9;
Euryarchaeota|Rep: Proteasome subunit beta precursor -
Methanococcus jannaschii
Length = 224
Score = 78.2 bits (184), Expect = 2e-13
Identities = 52/197 (26%), Positives = 93/197 (47%), Gaps = 1/197 (0%)
Frame = +2
Query: 161 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLL 340
G + V + DD ++ D R S G + ++ KKL+K+ + + G D + RLL
Sbjct: 6 GTTTVGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRLL 65
Query: 341 QARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG 520
A ++Y+ +++ A A +LS +L+ R FP+ ++ G D ++S DP+G
Sbjct: 66 IAEAKLYKMRTGRNIPPLACATLLSNILHSSRMFPFLTQIIIGGYDLLEGAKLFSLDPLG 125
Query: 521 HC-ARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERDI 697
F A GS + +L + G +V E+ + L + SA ERD
Sbjct: 126 GMNEEKTFTATGSGSPIAYGVL--EAGYDRDMSV-------EEGIKLALNALKSAMERDT 176
Query: 698 YTGDSIYILIITAHGIQ 748
++G+ I + +IT G++
Sbjct: 177 FSGNGISLAVITKDGVK 193
>UniRef50_Q9V247 Cluster: PsmB proteasome, subunit beta; n=4;
Thermococcaceae|Rep: PsmB proteasome, subunit beta -
Pyrococcus abyssi
Length = 197
Score = 77.4 bits (182), Expect = 4e-13
Identities = 53/199 (26%), Positives = 98/199 (49%), Gaps = 1/199 (0%)
Frame = +2
Query: 161 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLL 340
G + V I D ++ ADT+ S + T + +K+ +++ + G D + R+L
Sbjct: 6 GTTTVGIRVKDGVILAADTQASLDHMVETLNIRKIIPITDRIAITTAGSVGDVQMIARIL 65
Query: 341 QARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG 520
+A + Y+ + MTT A+A +LS +L ++FPY V ++ G + + + DP+G
Sbjct: 66 EAEARYYQFTWGRPMTTRAMANLLSNILNENKWFPYLVQIIIGGYVDE--PTIANLDPLG 123
Query: 521 HCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERDIY 700
++ A GS +L+ G + + +A +E A+ +K +A RD+Y
Sbjct: 124 GLIFDDYTATGSGTPFAIAILEE--GYRKNLGIEKA---KELAIKAVK----AAGARDVY 174
Query: 701 TGD-SIYILIITAHGIQEE 754
TG I ++ IT G++EE
Sbjct: 175 TGSKKIQVVTITKDGMKEE 193
>UniRef50_Q8TW10 Cluster: Protease subunit of the proteasome; n=2;
Euryarchaeota|Rep: Protease subunit of the proteasome -
Methanopyrus kandleri
Length = 210
Score = 77.0 bits (181), Expect = 5e-13
Identities = 52/193 (26%), Positives = 92/193 (47%), Gaps = 2/193 (1%)
Frame = +2
Query: 161 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLL 340
G + V I D V+ AD R G I + KK+F++ + + G D + L+
Sbjct: 10 GTTTVGILADKGVVLAADRRAVMGNLIAGKQVKKIFRIHDYIGVTTAGSVADAQKIVDLM 69
Query: 341 QARMQMYEHEHNKSMTTPAVAQMLSTMLY--YKRFFPYYVSNVLAGLDSDGKGCVYSYDP 514
+A ++YE HN+ ++ A+A M+S +L+ K F PY V ++ G + D +Y+ DP
Sbjct: 70 RAEARLYELRHNRMISARALANMISHVLHSSLKAFRPYLVQLIVGGFNDDDP-ALYNLDP 128
Query: 515 IGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERD 694
G ++ A GS + +L+ + E ++ + A+ + SA ERD
Sbjct: 129 SGSIIEEDYTATGSGSPTAYGVLEAEY---------EEGMSLDDAIEVAVRAVKSALERD 179
Query: 695 IYTGDSIYILIIT 733
TG+ + ++ IT
Sbjct: 180 TGTGEGVTVVTIT 192
>UniRef50_Q9P996 Cluster: Proteasome subunit beta precursor; n=10;
Euryarchaeota|Rep: Proteasome subunit beta precursor -
Archaeoglobus fulgidus
Length = 213
Score = 77.0 bits (181), Expect = 5e-13
Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 1/192 (0%)
Frame = +2
Query: 161 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLL 340
G + V + D V+ + R + G I ++ KK++++++ + G D L R++
Sbjct: 11 GTTTVGLVCKDGVVMATEKRATMGNFIASKAAKKIYQIADRMAMTTAGSVGDAQFLARII 70
Query: 341 QARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG 520
+ +YE + T A+A + S +L R+FPY V ++ G+DS+GK +YS DPIG
Sbjct: 71 KIEANLYEIRRERKPTVRAIATLTSNLLNSYRYFPYLVQLLIGGIDSEGKS-IYSIDPIG 129
Query: 521 HCARH-NFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERDI 697
+ A GS + +L+++ + ++A+ L SA +RD
Sbjct: 130 GAIEEKDIVATGSGSLTAYGVLEDRF---------TPEIGVDEAVELAVRAIYSAMKRDS 180
Query: 698 YTGDSIYILIIT 733
+GD I ++ IT
Sbjct: 181 ASGDGIDVVKIT 192
>UniRef50_A7DSL9 Cluster: Proteasome endopeptidase complex; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: Proteasome
endopeptidase complex - Candidatus Nitrosopumilus
maritimus SCM1
Length = 198
Score = 76.6 bits (180), Expect = 7e-13
Identities = 51/203 (25%), Positives = 97/203 (47%)
Frame = +2
Query: 161 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLL 340
G + V I D V ++ R++ G + ++ KK F ++ G D L+ +
Sbjct: 7 GATAVGITFDGGVVFASEKRIAFGNFLVSKTTKKTFPITPKVGATCAGLVADMQILSLQI 66
Query: 341 QARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG 520
A ++ + E + + VA+M+S M+Y +R+FP ++ G+ K +Y+ DP+G
Sbjct: 67 AALAKIRKMELKRDVPPNTVAKMMSNMMYERRYFPLLTQVIVGGVVD--KPIMYTLDPLG 124
Query: 521 HCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERDIY 700
+ A G+ A +LD Q + +T+++A+ L K +A+ RD
Sbjct: 125 SVLPDEYAAVGTGAEMALGVLDPQF---------KPNMTKDEAIDLAKRAVRAASLRDSA 175
Query: 701 TGDSIYILIITAHGIQEEKFELR 769
+GD + +L+IT G +E E++
Sbjct: 176 SGDGVDVLVITKDGTEEFTEEIK 198
>UniRef50_Q9NDA1 Cluster: Proteasome subunit beta type-3; n=6;
Trypanosomatidae|Rep: Proteasome subunit beta type-3 -
Trypanosoma brucei brucei
Length = 205
Score = 72.9 bits (171), Expect = 9e-12
Identities = 53/208 (25%), Positives = 95/208 (45%), Gaps = 2/208 (0%)
Frame = +2
Query: 158 NGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRL 337
+GGS +A+AG + V+ +D RL + + KL +++ V+G TG D T +
Sbjct: 7 SGGSCLAMAGKECFVVISDNRLGEQLKTISMEVPKLHVINDGIVMGLTGLRTDQQTFAQK 66
Query: 338 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLD-SDGKGCVYSYDP 514
+ R +MY+ + + A A ++S+MLY RF P++V V+ +D G+ + + D
Sbjct: 67 VNFRTEMYKLREERDINGKAFAALVSSMLYEARFGPWFVEPVIGTIDRKTGEVYLCATDL 126
Query: 515 IG-HCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAER 691
IG C ++ G+ A L + + + L E+ + +SA +R
Sbjct: 127 IGAPCEPEDYVCAGTCAESLHGM---------CEALWRPGLEPEELFEVAAQAMLSACDR 177
Query: 692 DIYTGDSIYILIITAHGIQEEKFELRKD 775
D +G I+T + + RKD
Sbjct: 178 DSLSGYGAVAAIVTKDKLVTRLIKGRKD 205
>UniRef50_A5UM14 Cluster: Proteasome, beta subunit; n=1;
Methanobrevibacter smithii ATCC 35061|Rep: Proteasome,
beta subunit - Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861)
Length = 204
Score = 70.9 bits (166), Expect = 4e-11
Identities = 47/196 (23%), Positives = 92/196 (46%)
Frame = +2
Query: 161 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLL 340
G + V I D V ++ R S G + + +K+FK+++ V G D L +++
Sbjct: 8 GTTTVGITCKDGVVFASERRASMGNLVAHKVAEKIFKINDHIVTTIAGSVGDAQNLMKII 67
Query: 341 QARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG 520
+A + +Y+ +N ++ A A + + +L R P YV +L G+D D K +YS DP G
Sbjct: 68 EAEVSLYQMRNNDKISVKAAASVTANIL---RSGPMYVQTLLGGMDGD-KPSLYSLDPAG 123
Query: 521 HCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERDIY 700
+ + GS + +L+++ +T ++ L + +A+ERD +
Sbjct: 124 GMIEDTYISTGSGSIVAYGVLEDRY---------HEEITTDEGLEIAVRAIKAASERDTF 174
Query: 701 TGDSIYILIITAHGIQ 748
+G+ + +T G +
Sbjct: 175 SGNGYLVAKVTKDGFE 190
>UniRef50_Q8SSI0 Cluster: 26S PROTEASOME BETA SUBUNIT, theta chain;
n=1; Encephalitozoon cuniculi|Rep: 26S PROTEASOME BETA
SUBUNIT, theta chain - Encephalitozoon cuniculi
Length = 205
Score = 70.5 bits (165), Expect = 5e-11
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 1/143 (0%)
Frame = +2
Query: 161 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLL 340
GGSI+A+A I D RL ++D ++ ++ +G DT L R +
Sbjct: 9 GGSILAMASSKGVAIMCDKRLGMSSITVSKDFTRIHRIGPRLYVGLPAFVPDTQVLLRKI 68
Query: 341 QARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG 520
+ ++ EH + M ++ M+S +LY KR PY + ++AGL SDGK + D IG
Sbjct: 69 RKNYNLFRLEHQREMEPEELSSMISFLLYSKRETPYITAPIVAGLTSDGKPYISGMDCIG 128
Query: 521 HCAR-HNFRAGGSAAAQLQPLLD 586
A +F A G+A L + +
Sbjct: 129 SIASPGDFVAVGTADKNLMGICE 151
>UniRef50_Q98S25 Cluster: Proteasome subunit beta type; n=1;
Guillardia theta|Rep: Proteasome subunit beta type -
Guillardia theta (Cryptomonas phi)
Length = 200
Score = 68.9 bits (161), Expect = 1e-10
Identities = 40/142 (28%), Positives = 69/142 (48%), Gaps = 1/142 (0%)
Frame = +2
Query: 161 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLL 340
GG +VAI G D I +D+ + + +K+FKL E ++G G D +L
Sbjct: 5 GGCVVAILGKDSLCIASDSENGSVSYLTEFKTQKIFKLHEDIIIGIVGLLGDIYGFKEIL 64
Query: 341 QARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG 520
+ + + + K M + ++ST+LY KRF PY + ++AG +GK + + D IG
Sbjct: 65 EYEISIVTKKEQKKMEPIEILSLISTLLYKKRFNPYLLEILVAGFTENGKPFLGTVDCIG 124
Query: 521 HCAR-HNFRAGGSAAAQLQPLL 583
+ N+ G+ + PL+
Sbjct: 125 AISYISNYACIGNLCENIFPLI 146
>UniRef50_A7AWU8 Cluster: Proteasome beta 2 subunit, putative; n=3;
Piroplasmida|Rep: Proteasome beta 2 subunit, putative -
Babesia bovis
Length = 218
Score = 68.1 bits (159), Expect = 2e-10
Identities = 49/197 (24%), Positives = 93/197 (47%), Gaps = 2/197 (1%)
Frame = +2
Query: 167 SIVAIAGDDYAVIGADTRLSTGF-SIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLLQ 343
+++ I G D+ I DT +I D+ K+ K+ +S V+ G D +++++
Sbjct: 4 TLIGIKGPDFVAIACDTYEKYSIITIKNDDESKIMKIGDSKVMMLAGPLGDRSQFSKMIK 63
Query: 344 ARMQMYEHEHNKSMTTPAVAQMLSTMLY-YKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG 520
A + ++++++K ++T A A + L Y R PY V ++AG+D DG ++ D +
Sbjct: 64 ATLDYHKYKNSKELSTNAAAHFVRLELAEYLRQSPYQVDMLIAGIDQDGPK-LFWIDYLA 122
Query: 521 HCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERDIY 700
C + + G L+ LLD + + +TRE+A+ALLK R +
Sbjct: 123 SCTQADTAVHGYGGFLLRGLLDKEY---------KPNMTREEAIALLKKCRHEVQNRFLI 173
Query: 701 TGDSIYILIITAHGIQE 751
+ + II G+ +
Sbjct: 174 SQSNFAAKIIDKDGVHD 190
>UniRef50_A0RU86 Cluster: 20S proteasome, alpha and beta subunit;
n=1; Cenarchaeum symbiosum|Rep: 20S proteasome, alpha
and beta subunit - Cenarchaeum symbiosum
Length = 193
Score = 68.1 bits (159), Expect = 2e-10
Identities = 46/197 (23%), Positives = 96/197 (48%)
Frame = +2
Query: 161 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLL 340
G + V I ++ ++ R++ G + +++ +K F+++ G D L+ +
Sbjct: 3 GATAVGITYAGGVILASEKRIAYGNFLVSKNTRKTFQITPYVGAACAGLVADMQILSLQI 62
Query: 341 QARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG 520
A ++ + + + + +VA+M+S M+Y +RFFP ++ G+ G+ +Y+ D +G
Sbjct: 63 SALAKIRKMDLKRDIPPNSVAKMMSNMMYERRFFPLLTQVIVGGV--VGEPAIYTLDSLG 120
Query: 521 HCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERDIY 700
+ A G+ A +LD Q ++ ++ + A+ L SAA RD +
Sbjct: 121 SVLPDEYAAVGTGAEMALGVLDPQF---------KSGMSEKDAVDLAVRGIRSAALRDSF 171
Query: 701 TGDSIYILIITAHGIQE 751
+GD + IL + A+G +E
Sbjct: 172 SGDGLDILALDANGARE 188
>UniRef50_A7D410 Cluster: Proteasome endopeptidase complex; n=2;
Halorubrum|Rep: Proteasome endopeptidase complex -
Halorubrum lacusprofundi ATCC 49239
Length = 243
Score = 67.3 bits (157), Expect = 4e-10
Identities = 52/219 (23%), Positives = 94/219 (42%)
Frame = +2
Query: 107 EYAVPGAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSEST 286
E++ A Q E G + V I D V+ D R S G + ++D +K+ ++
Sbjct: 31 EHSERRAAQADGEGEMKTGTTTVGIKTADGVVMATDMRASLGGMVSSKDVQKVEEVHPRG 90
Query: 287 VLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVL 466
L G L L+A +YE K M+ A++ + +L F Y V +L
Sbjct: 91 ALTIAGSVSAAQNLISTLKAETSLYETRRGKDMSMEALSTLTGNLLRSGAF--YIVQPIL 148
Query: 467 AGLDSDGKGCVYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREK 646
G+D +G +YS D +G + GS +Q L ++ + +T ++
Sbjct: 149 GGVDDEGSH-IYSIDALGGTTEEEYTVTGSG---------SQYALGVLEQEYDDDVTVDE 198
Query: 647 ALALLKDVFISAAERDIYTGDSIYILIITAHGIQEEKFE 763
A + SA ERD+ +G+ I + ++T G+ +++
Sbjct: 199 AKTMAAKAIQSAVERDLASGNGINVAVVTDDGVDITRYK 237
>UniRef50_P28061 Cluster: Proteasome subunit beta precursor; n=4;
Thermoplasmatales|Rep: Proteasome subunit beta precursor
- Thermoplasma acidophilum
Length = 211
Score = 67.3 bits (157), Expect = 4e-10
Identities = 48/193 (24%), Positives = 92/193 (47%)
Frame = +2
Query: 155 DNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTR 334
+ G + V I D ++ + R++ I ++ KKLF++ T + G D L R
Sbjct: 6 ETGTTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVR 65
Query: 335 LLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDP 514
++A +++Y + +M AVA +LS ML ++ PY V ++ G+D+ V+S D
Sbjct: 66 YMKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGIDTAPH--VFSIDA 123
Query: 515 IGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERD 694
G + + GS + + +L++Q K +T ++ + L+ +A +RD
Sbjct: 124 AGGSVEDIYASTGSGSPFVYGVLESQYSEK---------MTVDEGVDLVIRAISAAKQRD 174
Query: 695 IYTGDSIYILIIT 733
+G I + +IT
Sbjct: 175 SASGGMIDVAVIT 187
>UniRef50_Q8ZYF2 Cluster: Proteasome beta subunit; n=5;
Thermoproteaceae|Rep: Proteasome beta subunit -
Pyrobaculum aerophilum
Length = 202
Score = 66.5 bits (155), Expect = 8e-10
Identities = 44/187 (23%), Positives = 88/187 (47%)
Frame = +2
Query: 173 VAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLLQARM 352
V IA D V+ D R++ G+ I + +K++K+ + +G D ++ L R
Sbjct: 5 VGIAVKDGVVLATDKRVTAGYYIAHKRGEKIWKIDDHVAATMSGGVADLQSVLSFLTLRA 64
Query: 353 QMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCAR 532
Y+ E+ + + A+ +S +L+Y R + Y V +++ G+D + +Y D +G +
Sbjct: 65 HEYKIEYKRPIPISALVNYMSLILFYSRPYIYIVHSIIGGVDEEEGAVLYMVDWLGTVTK 124
Query: 533 HNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERDIYTGDS 712
+ A GS + + L ++G + +T E A+ L +A D +G+
Sbjct: 125 EKYIATGSGSPYAKGAL--EVGYRE-------DMTLEDAVDLAIKAVKAAIRNDPGSGEG 175
Query: 713 IYILIIT 733
I +++IT
Sbjct: 176 IDVVVIT 182
>UniRef50_Q5CUK0 Cluster: Proteasome subunit beta type; n=2;
Cryptosporidium|Rep: Proteasome subunit beta type -
Cryptosporidium parvum Iowa II
Length = 279
Score = 65.7 bits (153), Expect = 1e-09
Identities = 49/191 (25%), Positives = 92/191 (48%), Gaps = 1/191 (0%)
Frame = +2
Query: 161 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLL 340
G +IV +A +D V+GADTR + G + +D +K+ +LS++ G D +T L+
Sbjct: 41 GTTIVGVACNDCVVLGADTRATNGPIVADKDCEKIHRLSDNIFAAGAGTAADLDHVTSLI 100
Query: 341 QARMQMYEHEHNKSMTTPAVAQMLSTMLY-YKRFFPYYVSNVLAGLDSDGKGCVYSYDPI 517
+ +++ + + N+ MLS LY Y+ + ++ ++AG DS G V+
Sbjct: 101 EGNLELQKLQMNRKPRVAHAVSMLSDHLYKYQGYIGAHL--IVAGSDSTG-NFVFQVSAN 157
Query: 518 GHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERDI 697
G + F + GS + + +L+ + LT + + L+ D + D+
Sbjct: 158 GCIMQLPFTSMGSGSLCARSILEARY---------RDGLTESECVELVSDAIRAGIYNDL 208
Query: 698 YTGDSIYILII 730
Y+G ++ ILII
Sbjct: 209 YSGSNVNILII 219
>UniRef50_Q22MS9 Cluster: Proteasome subunit beta type; n=2;
Oligohymenophorea|Rep: Proteasome subunit beta type -
Tetrahymena thermophila SB210
Length = 227
Score = 65.7 bits (153), Expect = 1e-09
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 1/202 (0%)
Frame = +2
Query: 161 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLL 340
G SI+A+ D ++GAD+R ++G I R Q K+ L E +G DT TL +
Sbjct: 25 GTSIMALVYDGGVLVGADSRTTSGSYIADRAQDKVDYLHERIYCLRSGSAADTQTLCSYV 84
Query: 341 QARMQMYEHEHNKSMTTPAVAQMLSTMLY-YKRFFPYYVSNVLAGLDSDGKGCVYSYDPI 517
+ + ++ E + T A++ S ++Y Y+ V ++AG+D + +Y+ P
Sbjct: 85 RYYLDVHSMELQRRPTVKTAAKLFSNLIYQYQDNLSAAV--IVAGIDDNEGPSIYACQPS 142
Query: 518 GHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERDI 697
G C + GGS + + +D NM E A L+K A RD
Sbjct: 143 GSCIKQQVAIGGSGSGFIFSYVDANF-RPNMD--------LESAKKLVKTALAHAMSRDG 193
Query: 698 YTGDSIYILIITAHGIQEEKFE 763
+G I ++ IT + E F+
Sbjct: 194 SSGGIIRLVNITKDNVTREFFD 215
>UniRef50_Q966I8 Cluster: Proteasome subunit beta type; n=2;
Caenorhabditis|Rep: Proteasome subunit beta type -
Caenorhabditis elegans
Length = 239
Score = 65.3 bits (152), Expect = 2e-09
Identities = 55/207 (26%), Positives = 93/207 (44%)
Frame = +2
Query: 161 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLL 340
G +++A+ + V+G D+R S G I +R K+ ++++ V+ +G DT + +
Sbjct: 23 GTTLIAMEYNGGVVVGTDSRTSAGSFITSRATNKITPITDNMVVCRSGSAADTQAIADIA 82
Query: 341 QARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG 520
+ + +Y NK +T +Q+ LY R S ++AG D + G VY+ G
Sbjct: 83 KYHIDVYTMTENKPVTIYRSSQIFRQFLYNYR-EQLSASVLVAGWDEELGGQVYAIPIGG 141
Query: 521 HCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERDIY 700
+R A GS + +Q LD+Q LT E+ A++K A RD
Sbjct: 142 FVSRQRSTASGSGSTFVQGFLDSQ---------WRPNLTLEECKAIVKQAVGLATFRDGS 192
Query: 701 TGDSIYILIITAHGIQEEKFELRKD*F 781
+G + + +I G Q E F K F
Sbjct: 193 SGGVVRLAVINKAGSQFELFRPDKPGF 219
>UniRef50_Q2VIK4 Cluster: RcPSMB3; n=15; Euteleostomi|Rep: RcPSMB3 -
Homo sapiens (Human)
Length = 204
Score = 65.3 bits (152), Expect = 2e-09
Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 2/146 (1%)
Frame = +2
Query: 158 NGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRL 337
NGG+I+A+ G + I AD + T D +++F + +G G D + +
Sbjct: 7 NGGAIMAMKGKNRVAIAADRHFGIQAQMVTTDFQEIFPMGGWLYIGLAGLATDVQRVAQC 66
Query: 338 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLD-SDGKGCVYSYDP 514
L+ ++ +YE + + + M++ LY K F PYY V+AGLD K S D
Sbjct: 67 LKFQLNLYELKEGQQIKPYTFTSMVANFLYEKHFGPYYTDPVIAGLDLKTFKPFSCSLDL 126
Query: 515 IGH-CARHNFRAGGSAAAQLQPLLDN 589
IG +F GS A Q+ + ++
Sbjct: 127 IGFPMVTDDFVVNGSYAEQMYGMCES 152
>UniRef50_Q9HR36 Cluster: Proteasome, subunit alpha; n=7;
Halobacteriaceae|Rep: Proteasome, subunit alpha -
Halobacterium salinarium (Halobacterium halobium)
Length = 255
Score = 64.9 bits (151), Expect = 2e-09
Identities = 54/196 (27%), Positives = 94/196 (47%), Gaps = 1/196 (0%)
Frame = +2
Query: 161 GGSIVAIAGDDYAVIGADTRLSTGFSIYT-RDQKKLFKLSESTVLGATGCWCDTLTLTRL 337
G +IV + D ++ +D R S G + + ++ +K+ ++ + L +G + R
Sbjct: 60 GTTIVGLTTQDGVLMASDMRASLGGRVISNKNVQKVEEIQPNAALSISGSVGGAQSFIRS 119
Query: 338 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPI 517
L+A +YE + M+ A++ M S +L FF V +L G+D DG G V+S DP
Sbjct: 120 LRAEANLYEARRGEYMSIDALSTMASNLLRGGPFFR--VVPILGGVDDDG-GHVFSLDPA 176
Query: 518 GHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERDI 697
G + A GS +L+ + +++T A + A A+ SA+ERD
Sbjct: 177 GSSMSDTYTAQGSGMPYALGVLEQEYS----EDLTMADAEQVAAHAVK-----SASERDT 227
Query: 698 YTGDSIYILIITAHGI 745
+G+ I+I IT G+
Sbjct: 228 ASGNGIHITKITHDGL 243
>UniRef50_Q74MP5 Cluster: NEQ203; n=1; Nanoarchaeum equitans|Rep:
NEQ203 - Nanoarchaeum equitans
Length = 196
Score = 64.9 bits (151), Expect = 2e-09
Identities = 47/203 (23%), Positives = 95/203 (46%), Gaps = 1/203 (0%)
Frame = +2
Query: 167 SIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLLQA 346
+I+ I D V+ +D + S G + + +K+ +++ +L +G D + ++L+
Sbjct: 3 TIIGIKARDGVVLASDKQASMGNIVEDKRAQKIIPITDYILLAGSGTVADLQHIAKILKT 62
Query: 347 RMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHC 526
+++ E ++M A +LS +LY RF+ + ++AG + + +YS D IG
Sbjct: 63 ELKLRELYSRRTMNVIEAANLLSHLLYQNRFYLNPLGLLIAGPINSKEFGIYSLDGIGAI 122
Query: 527 AR-HNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERDIYT 703
+ ++ A GS I L ++ +T A+ L + S+ RD+++
Sbjct: 123 SEIKDYFAEGSGGV---------IALGTLEAEYNPDITVRDAIKLAEKALKSSIARDVFS 173
Query: 704 GDSIYILIITAHGIQEEKFELRK 772
G I I IT G+++ E +K
Sbjct: 174 GYGIEIYTITKKGVEKLFLEAQK 196
>UniRef50_Q9UXF3 Cluster: Proteasome subunit beta precursor; n=5;
Sulfolobaceae|Rep: Proteasome subunit beta precursor -
Sulfolobus solfataricus
Length = 208
Score = 64.9 bits (151), Expect = 2e-09
Identities = 47/204 (23%), Positives = 92/204 (45%)
Frame = +2
Query: 161 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLL 340
G + V I +D ++ AD R S GF + + +K+ +++ + G D + +L
Sbjct: 14 GTTTVGIRVNDGVILAADRRASAGFFVANKMVRKVLYITDKIGITTAGSVADLQFIYDVL 73
Query: 341 QARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG 520
+ ++ +A L+ +L ++FPY V ++ G D + +++ D +G
Sbjct: 74 KNIYHYNSITKYGPISIKGIATRLANVLSATKYFPYIVQILIGGYDDQPR--LFNLDYLG 131
Query: 521 HCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERDIY 700
N+ A GS + +L+++ K +T ++A L K SA +RD +
Sbjct: 132 DITEENYVATGSGSPVAMGVLEDEYNPK---------MTLDEAADLAKRAVFSAIKRDSF 182
Query: 701 TGDSIYILIITAHGIQEEKFELRK 772
TG + + I + G +E +F L K
Sbjct: 183 TGTGVIVAKIHSKGHEELEFYLNK 206
>UniRef50_A3DN21 Cluster: 20S proteasome, A and B subunits; n=1;
Staphylothermus marinus F1|Rep: 20S proteasome, A and B
subunits - Staphylothermus marinus (strain ATCC 43588 /
DSM 3639 / F1)
Length = 213
Score = 63.7 bits (148), Expect = 5e-09
Identities = 46/204 (22%), Positives = 96/204 (47%)
Frame = +2
Query: 164 GSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLLQ 343
G+++ I + VI + RL+ + +++ +K+ +++ +G G D + R L+
Sbjct: 18 GTVLGIKAVNGVVIAGEKRLTYDGYVLSKNTRKVHPITKHVGIGFAGLVGDAQFIIRALR 77
Query: 344 ARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGH 523
+ YE + + + +A++LS +LY + P V+ G D G +Y DP+G
Sbjct: 78 MEAENYELQLGREIRVRGLAKILSLILYSYKLAPLMTEVVVGGFDEKGPQ-IYVLDPVGS 136
Query: 524 CARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERDIYT 703
+ A GS +++ + + +V EA + A++ +++ A ERD +
Sbjct: 137 LIEDKYVALGSGGPIALGIIEKE--YREDIDVDEA---EKLAVSAIRE----AIERDAVS 187
Query: 704 GDSIYILIITAHGIQEEKFELRKD 775
GD + +L IT G ++ R++
Sbjct: 188 GDGVDVLRITEEGYSLREYMFRRE 211
>UniRef50_Q5CU00 Cluster: Pre3p/proteasome regulatory subunit beta
type 6, NTN hydrolase fold; n=3; Cryptosporidium|Rep:
Pre3p/proteasome regulatory subunit beta type 6, NTN
hydrolase fold - Cryptosporidium parvum Iowa II
Length = 248
Score = 62.1 bits (144), Expect = 2e-08
Identities = 49/199 (24%), Positives = 96/199 (48%)
Frame = +2
Query: 155 DNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTR 334
+ G +IVA+ D V+ AD R STG I R +K+ ++++ + +G DT ++R
Sbjct: 49 ETGTTIVALKYKDGLVLAADGRTSTGPIIAFRAARKITQITDKVFMCRSGSAADTQIISR 108
Query: 335 LLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDP 514
++ +Q +E E + +VA ++ ++ Y+ ++AG+D +G+ V+
Sbjct: 109 YVRRIVQDHELETGEDTKVKSVAS-VARLISYQNKEHLLADMIIAGMDPNGEFKVFRIPL 167
Query: 515 IGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERD 694
G ++ GS + + +LD++ +E L K+ A +D+ A RD
Sbjct: 168 GGTLIEGSYAISGSGSGYIYSMLDSKYH-------SEMDLDECKSFA--RDLVSHAMFRD 218
Query: 695 IYTGDSIYILIITAHGIQE 751
+G I I++I G++E
Sbjct: 219 SSSGGIIRIIVINKSGVEE 237
>UniRef50_P49721 Cluster: Proteasome subunit beta type-2; n=40;
Fungi/Metazoa group|Rep: Proteasome subunit beta type-2
- Homo sapiens (Human)
Length = 201
Score = 60.9 bits (141), Expect = 4e-08
Identities = 48/196 (24%), Positives = 84/196 (42%), Gaps = 2/196 (1%)
Frame = +2
Query: 170 IVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLLQAR 349
++ I G DY ++ +D ++ D K+FK+SE +L G DT+ +Q
Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 350 MQMYEHEHNKSMTTPAVAQMLSTML--YYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGH 523
+Q+Y+ + ++ A A L + PY+V+ +LAG D +Y D +
Sbjct: 64 VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAA 123
Query: 524 CARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERDIYT 703
A+ F A G A +LD ++RE+A+ LL+ +R I
Sbjct: 124 LAKAPFAAHGYGAFLTLSILDRYY---------TPTISRERAVELLRKCLEELQKRFILN 174
Query: 704 GDSIYILIITAHGIQE 751
+ + II +GI +
Sbjct: 175 LPTFSVRIIDKNGIHD 190
>UniRef50_Q0UWV2 Cluster: Predicted protein; n=4;
Pezizomycotina|Rep: Predicted protein - Phaeosphaeria
nodorum (Septoria nodorum)
Length = 260
Score = 60.5 bits (140), Expect = 5e-08
Identities = 58/215 (26%), Positives = 96/215 (44%), Gaps = 3/215 (1%)
Frame = +2
Query: 110 YAVPGAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTV 289
+ G QH P G S++A D VI AD S G D K+L K ++ V
Sbjct: 24 FQTAGPNQHTQSPIV-TGTSVLAAKFKDGVVIAADNLASYGSLARFTDVKRLRKFNDEVV 82
Query: 290 LGATGCWCDTLTLTRLLQARMQMYEHEHNKS-MTTPAVAQMLSTMLYYKR--FFPYYVSN 460
+G G D L RLL + + N++ + + L+ ++Y +R F P +
Sbjct: 83 VGFGGDVSDMQYLDRLLNSLDIRETYSSNETALNAKNLHTYLAKVMYNRRSKFDPLWNHL 142
Query: 461 VLAGLDSDGKGCVYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTR 640
++AG+D + K + S D +G A G A QP+L + L + +V + +T+
Sbjct: 143 LIAGMDGESKPFLASADLLGTTFSSPSLATGFGAHLAQPIL--RTILPDEASVEK--VTK 198
Query: 641 EKALALLKDVFISAAERDIYTGDSIYILIITAHGI 745
E+A+ +K+ RD + D I +IT G+
Sbjct: 199 EQAVEKIKECMKVLFYRDARSMDKYSIAVITKEGV 233
>UniRef50_Q7XY60 Cluster: Proteasome chain protein; n=1; Griffithsia
japonica|Rep: Proteasome chain protein - Griffithsia
japonica (Red alga)
Length = 187
Score = 59.3 bits (137), Expect = 1e-07
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 4/145 (2%)
Frame = +2
Query: 164 GSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLLQ 343
GSI+A+ G DY +I AD + + D K+ +L E + A G D + +Q
Sbjct: 3 GSIIALQGADYVLIAADVSCARSIVVMKDDMDKIRQLDEGKLFAAAGVPGDVTKFSEHVQ 62
Query: 344 ARMQMYEHEHNKSMTTPAVAQML-STMLYYKRFFPYYVSNVLAGLDS--DGKG-CVYSYD 511
+++Y SM+T AVA + ++ R P+ + ++ G D +G G +YS D
Sbjct: 63 KDVRLYSLRSGISMSTAAVANYTRGELAHFLRRSPFQCNVIIGGYDKAPNGDGPSLYSCD 122
Query: 512 PIGHCARHNFRAGGSAAAQLQPLLD 586
+G + F A G A + LD
Sbjct: 123 YLGTLTKLTFAAEGYAQYFVLSTLD 147
>UniRef50_Q4QGU1 Cluster: Proteasome subunit beta type; n=7;
Trypanosomatidae|Rep: Proteasome subunit beta type -
Leishmania major
Length = 283
Score = 58.8 bits (136), Expect = 2e-07
Identities = 38/142 (26%), Positives = 61/142 (42%)
Frame = +2
Query: 161 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLL 340
G +I+A++ V+ AD+R S+G + R KL KL+E +G DT L +
Sbjct: 54 GTTILAVSYKGGVVLAADSRTSSGTYVVNRASNKLTKLTEKIYCCRSGSAADTQALAERV 113
Query: 341 QARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG 520
+ Y+ + + A + M Y R+ ++AG D G VYS G
Sbjct: 114 SNYLGSYQTDIGADVNVATAANLFHKMCYVNRW-NISAGIIVAGYDPINGGSVYSIPSGG 172
Query: 521 HCARHNFRAGGSAAAQLQPLLD 586
C + ++ GGS + L D
Sbjct: 173 SCVKLDYALGGSGSIFLYSFFD 194
>UniRef50_P28072 Cluster: Proteasome subunit beta type-6 precursor;
n=43; Bilateria|Rep: Proteasome subunit beta type-6
precursor - Homo sapiens (Human)
Length = 239
Score = 58.0 bits (134), Expect = 3e-07
Identities = 49/198 (24%), Positives = 81/198 (40%)
Frame = +2
Query: 161 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLL 340
G +I+A+ D V+GAD+R +TG I R KL + + +G DT + +
Sbjct: 34 GTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADAV 93
Query: 341 QARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG 520
++ + E N+ A + M Y R ++AG D G VYS G
Sbjct: 94 TYQLGFHSIELNEPPLVHTAASLFKEMCYRYR-EDLMAGIIIAGWDPQEGGQVYSVPMGG 152
Query: 521 HCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERDIY 700
R +F GGS ++ + +D +T+E+ L + A ERD
Sbjct: 153 MMVRQSFAIGGSGSSYIYGYVD---------ATYREGMTKEECLQFTANALALAMERDGS 203
Query: 701 TGDSIYILIITAHGIQEE 754
+G I + I G++ +
Sbjct: 204 SGGVIRLAAIAESGVERQ 221
>UniRef50_P38624 Cluster: Proteasome component PRE3 precursor; n=35;
Eukaryota|Rep: Proteasome component PRE3 precursor -
Saccharomyces cerevisiae (Baker's yeast)
Length = 215
Score = 56.8 bits (131), Expect = 6e-07
Identities = 46/196 (23%), Positives = 89/196 (45%)
Frame = +2
Query: 161 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLL 340
G SI+A+ D ++GAD+R +TG I R KL ++ + +G DT + ++
Sbjct: 19 GTSIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCCRSGSAADTQAIADIV 78
Query: 341 QARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG 520
Q +++Y ++ T A + + L Y+ ++AG D KG VY+ G
Sbjct: 79 QYHLELYTSQYGTPSTETAAS--VFKELCYENKDNLTAGIIVAGYDDKNKGEVYTIPLGG 136
Query: 521 HCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERDIY 700
+ + GS + + D KN + +++E+ + +K A + D
Sbjct: 137 SVHKLPYAIAGSGSTFIYGYCD-----KNFRE----NMSKEETVDFIKHSLSQAIKWDGS 187
Query: 701 TGDSIYILIITAHGIQ 748
+G I ++++TA G++
Sbjct: 188 SGGVIRMVVLTAAGVE 203
>UniRef50_Q8LD27 Cluster: Proteasome subunit beta type-6 precursor;
n=14; Magnoliophyta|Rep: Proteasome subunit beta type-6
precursor - Arabidopsis thaliana (Mouse-ear cress)
Length = 233
Score = 55.6 bits (128), Expect = 1e-06
Identities = 46/195 (23%), Positives = 84/195 (43%)
Frame = +2
Query: 161 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLL 340
G +I+ + + V+GAD+R STG + R K+ +L+++ + +G D+ ++ +
Sbjct: 12 GTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADSQVVSDYV 71
Query: 341 QARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG 520
+ + + +H + T A ++ ML Y ++ G D G +Y G
Sbjct: 72 RYFLHQHTIQHGQPATVKVSANLI-RMLAYNNKNMLQTGLIVGGWDKYEGGKIYGIPLGG 130
Query: 521 HCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERDIY 700
F GGS ++ L D Q NM T+E+A L+ A RD
Sbjct: 131 TVVEQPFAIGGSGSSYLYGFFD-QAWKDNM--------TKEEAEQLVVKAVSLAIARDGA 181
Query: 701 TGDSIYILIITAHGI 745
+G + +II + G+
Sbjct: 182 SGGVVRTVIINSEGV 196
>UniRef50_A0RXV1 Cluster: 20S proteasome, alpha and beta subunit;
n=1; Cenarchaeum symbiosum|Rep: 20S proteasome, alpha
and beta subunit - Cenarchaeum symbiosum
Length = 195
Score = 54.4 bits (125), Expect = 3e-06
Identities = 39/192 (20%), Positives = 81/192 (42%)
Frame = +2
Query: 173 VAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLLQARM 352
+ I D V+ AD R S G+ I + K+ ++ + L G D + +L+
Sbjct: 1 MGIKATDGVVLCADMRASAGYFIANNNTMKIQRIDDHAGLTLAGGVADAQNIVDVLRYHA 60
Query: 353 QMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCAR 532
++ + ++A++ S + + R +P+ ++ G D+ G +Y+ D G
Sbjct: 61 SLHRIRKQGPIPIKSLARLTSLIFHQNRGYPFMADILMGGFDAVGP-ALYNIDMFGSVEE 119
Query: 533 HNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERDIYTGDS 712
++ GS + + ++ A LT ++A + +A R+I TGD
Sbjct: 120 KSYVTTGSG---------SPVAYGTLEEEYRADLTADEAKGVALRAVKAAITRNIGTGDG 170
Query: 713 IYILIITAHGIQ 748
I + +I +G +
Sbjct: 171 INVAVINGNGFE 182
>UniRef50_Q6BG89 Cluster: Proteasome subunit beta type; n=3;
Paramecium tetraurelia|Rep: Proteasome subunit beta type
- Paramecium tetraurelia
Length = 236
Score = 54.0 bits (124), Expect = 4e-06
Identities = 50/219 (22%), Positives = 97/219 (44%), Gaps = 3/219 (1%)
Frame = +2
Query: 116 VPGAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLG 295
+ G +QH P GGS++A+ + ++G DT S G ++ KK+ ++S++T+
Sbjct: 7 ISGEQQHTTSPVV-TGGSVIALVYNGGVIVGTDTLCSYGSMAAFKNVKKIAQISKNTIYA 65
Query: 296 ATGCWCDTLTLTR-LLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKR--FFPYYVSNVL 466
++G + D + + L + +++ + L+ + Y KR P Y+ NV+
Sbjct: 66 SSGEFSDFQQVVKELAKIDRSALQYDDGVHPSPKDYGNFLARLSYKKRCKINPLYLQNVI 125
Query: 467 AGLDSDGKGCVYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREK 646
AG +G+ + D G NF G A+ + ++ N +N T ++
Sbjct: 126 AGF-HNGERYLSLVDIYGTYLESNFITTGFASYFCKAIISNYWN----EN-----CTLDQ 175
Query: 647 ALALLKDVFISAAERDIYTGDSIYILIITAHGIQEEKFE 763
A ++++ F RD D I + + A G E+ E
Sbjct: 176 AKQVIRECFKVLFCRDCRAHDVIQLAYVDAQGAHIEEPE 214
>UniRef50_A0CW62 Cluster: Proteasome subunit beta type; n=3;
Oligohymenophorea|Rep: Proteasome subunit beta type -
Paramecium tetraurelia
Length = 194
Score = 54.0 bits (124), Expect = 4e-06
Identities = 43/197 (21%), Positives = 80/197 (40%), Gaps = 3/197 (1%)
Frame = +2
Query: 167 SIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLLQA 346
SI + G D+ ++ D ++ + K+ KL + + G +G D + ++
Sbjct: 3 SIFGLQGGDFVIVACDGSIAHSILKIKETEDKILKLDDHKIFGISGEGADRNSFGEIVHK 62
Query: 347 RMQMYEHEHNKSMTTPAVAQMLSTMLYY---KRFFPYYVSNVLAGLDSDGKGCVYSYDPI 517
+ ++ M A + +M R P+ + +L G+DSDG +Y D +
Sbjct: 63 NHCLIRYKTGGYMNLQETAHFVRSMYAQAIRSRDGPHQCNGLLGGVDSDGTPSLYWLDYL 122
Query: 518 GHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERDI 697
G + A G A L LLDNQ + LT+E+ + ++K R +
Sbjct: 123 GSLQKITRGAQGYANYFLLGLLDNQY---------KPNLTKEEGIEIIKKCIKELQTRFL 173
Query: 698 YTGDSIYILIITAHGIQ 748
+ + I+T GI+
Sbjct: 174 IAQNKFIVKIVTKQGIE 190
>UniRef50_Q5DAM2 Cluster: Proteasome subunit beta type; n=1;
Schistosoma japonicum|Rep: Proteasome subunit beta type
- Schistosoma japonicum (Blood fluke)
Length = 248
Score = 52.0 bits (119), Expect = 2e-05
Identities = 47/210 (22%), Positives = 93/210 (44%), Gaps = 3/210 (1%)
Frame = +2
Query: 128 KQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGC 307
K H P G S++ I D V+ AD +S G D +++FK++ESTV+ +G
Sbjct: 20 KHHTMTPIC-TGTSVIGIKYKDGVVLAADLLVSYGSLAKYMDFERMFKVNESTVMCCSGD 78
Query: 308 WCDTLTLTRLLQARMQMYEHEHNKSMTTP-AVAQMLSTMLYYK--RFFPYYVSNVLAGLD 478
D L ++ + + +P A+ ++ +LY + R P + + ++ G++
Sbjct: 79 VADFQFLKHHVKELTHVDNLLSDGFKLSPHALHSWITRILYNRRSRLEPLWNTYLVGGIE 138
Query: 479 SDGKGCVYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALAL 658
++G+ + + +G N+ A G A P+L + +K + +T E A++
Sbjct: 139 ANGEPFIGYCNMLGVSFSENYVATGFGAYLATPILRECLEIKAKNDPKN--ITEEDAIST 196
Query: 659 LKDVFISAAERDIYTGDSIYILIITAHGIQ 748
+ RD D+ + +I G+Q
Sbjct: 197 ITCAMKQLYFRDCRAFDTYQMAVINKEGVQ 226
>UniRef50_Q9VNA5 Cluster: Probable proteasome subunit beta type-4;
n=3; Sophophora|Rep: Probable proteasome subunit beta
type-4 - Drosophila melanogaster (Fruit fly)
Length = 268
Score = 51.6 bits (118), Expect = 2e-05
Identities = 36/144 (25%), Positives = 73/144 (50%), Gaps = 3/144 (2%)
Frame = +2
Query: 161 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLL 340
G S++ I D ++ ADT +S G ++ +++FK++++ +LG +G + D ++ R +
Sbjct: 57 GTSVLGIRYDSGVMLAADTLVSYGSMARYQNIERVFKVNKNILLGGSGDFADIQSIKRNI 116
Query: 341 QARM-QMYEHEHNKSMTTPAVAQMLSTMLYYK--RFFPYYVSNVLAGLDSDGKGCVYSYD 511
+M + + N M ++A ++ +LY + R P Y+ V+ G+D++G + + D
Sbjct: 117 DQKMIEDQCCDDNIEMKPKSLASWMTRVLYNRRSRMNPLYIDVVVGGVDNEGTPYLANVD 176
Query: 512 PIGHCARHNFRAGGSAAAQLQPLL 583
G A G A PL+
Sbjct: 177 LRGRSYEDYVVATGFARHLAVPLV 200
>UniRef50_Q9VQE5 Cluster: Probable proteasome subunit beta type-2;
n=1; Drosophila melanogaster|Rep: Probable proteasome
subunit beta type-2 - Drosophila melanogaster (Fruit
fly)
Length = 210
Score = 51.6 bits (118), Expect = 2e-05
Identities = 40/197 (20%), Positives = 82/197 (41%), Gaps = 2/197 (1%)
Frame = +2
Query: 167 SIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLLQA 346
+I+ I G D+ ++ +DT + DQ K+ +LS+ ++ G DT+ T +
Sbjct: 5 TILGIKGPDFVMLASDTMQAKSLVFMKDDQSKIHRLSDFNMMATVGDGGDTIQFTDFISK 64
Query: 347 RMQMYEHEHNKSMTTPAVAQMLSTML--YYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG 520
+ +Y+ H ++ + A L Y + Y V+ +LAG D+ ++ D G
Sbjct: 65 NLHLYKISHGYHLSAKSAAHFTRKTLADYIRTNTRYQVAMLLAGYDAVEGPDLHYIDSYG 124
Query: 521 HCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERDIY 700
N G + +L Q + L++E A +L+K + R I
Sbjct: 125 AAQSINHAGHGWGSMFCGSIL---------QRYWNSKLSQEDAYSLMKKCVLEIQRRLII 175
Query: 701 TGDSIYILIITAHGIQE 751
+ + ++ + G+++
Sbjct: 176 NQRNFEVYVVDSKGMRK 192
>UniRef50_UPI00004991C1 Cluster: proteasome beta subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome beta
subunit - Entamoeba histolytica HM-1:IMSS
Length = 213
Score = 50.8 bits (116), Expect = 4e-05
Identities = 48/198 (24%), Positives = 83/198 (41%)
Frame = +2
Query: 161 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLL 340
G +I+ + + ++GAD R S G + R + K+ +S+S + G + T+ +
Sbjct: 14 GTTIIGVVYNGGVLLGADGRTSMGSIVVNRCKNKIRMVSDSIGMCTAGTAAHSETIGDYV 73
Query: 341 QARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG 520
+ ++MY + + T A A + ++Y + F S V G D +Y G
Sbjct: 74 KHALRMYTAQTGEEPTVLAAATSIKNIIYGNKSF-LSSSVVCGGYDPVNGATLYRILQSG 132
Query: 521 HCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERDIY 700
+ + GGS + + D KNM T E+A + A RD
Sbjct: 133 AMKQDDICVGGSGSTYIWGYCDAHFK-KNM--------TFEEAKQFIVTAVSLAIYRDGS 183
Query: 701 TGDSIYILIITAHGIQEE 754
+G I+ + ITA G+Q E
Sbjct: 184 SGGIIHTVNITAEGVQSE 201
>UniRef50_Q8SR11 Cluster: Proteasome subunit beta type; n=1;
Encephalitozoon cuniculi|Rep: Proteasome subunit beta
type - Encephalitozoon cuniculi
Length = 203
Score = 50.8 bits (116), Expect = 4e-05
Identities = 46/197 (23%), Positives = 88/197 (44%), Gaps = 1/197 (0%)
Frame = +2
Query: 161 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLL 340
G +I+AI DD +IGAD+R S G + +R KL ++++ + +G DT ++ L
Sbjct: 10 GTTIIAIKYDDGVLIGADSRTSMGAYVSSRVTDKLTQITDKIFVCRSGSSADTQMISSYL 69
Query: 341 QARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSN-VLAGLDSDGKGCVYSYDPI 517
+ + MY + A + S ++Y P ++ ++AG D K V++
Sbjct: 70 RMYLSMYSQLEDSIPQVQRAAALASKIIYEN---PSLLAGLIVAGYDD--KPRVFNISLG 124
Query: 518 GHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERDI 697
G ++ GGS +A + D + ++ E+ + +++ A RD
Sbjct: 125 GSLTERDWAIGGSGSAFIYGYCDVN---------WRSGMSLEEGIRFVRNAVSCAINRDN 175
Query: 698 YTGDSIYILIITAHGIQ 748
+G I + I+ G+Q
Sbjct: 176 ASGGCIRMSAISRTGVQ 192
>UniRef50_UPI0000499449 Cluster: proteasome beta subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome beta
subunit - Entamoeba histolytica HM-1:IMSS
Length = 252
Score = 50.4 bits (115), Expect = 5e-05
Identities = 38/181 (20%), Positives = 76/181 (41%)
Frame = +2
Query: 200 VIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNK 379
++ D+R + G I + +K ++ + G D R L + +++E +
Sbjct: 51 IVAVDSRATRGAFISSGSVQKYIPITSHIIGTMAGGAADCAYWERELTRQCRLFELRNKP 110
Query: 380 SMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCARHNFRAGGSA 559
++ A ++ML+ +LY R + V +++ G D G Y D H F G S
Sbjct: 111 PISVAAASKMLANILYQYRNYNLSVGSMICGYDKTGPHIFYVEDGGVRIPGHLFSVG-SG 169
Query: 560 AAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERDIYTGDSIYILIITAH 739
+ L+D++ + +EKA+ L + A RD+ +G ++ ++ I
Sbjct: 170 SPYAVSLIDSEYDYN---------MPKEKAIELARRAIFHATHRDVASGGNVNVIFIDKD 220
Query: 740 G 742
G
Sbjct: 221 G 221
>UniRef50_Q4SNR3 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=3; Coelomata|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 268
Score = 50.4 bits (115), Expect = 5e-05
Identities = 42/195 (21%), Positives = 89/195 (45%)
Frame = +2
Query: 158 NGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRL 337
+G + +A ++ D+R + G I ++ KK+ +++ + G D RL
Sbjct: 67 HGTTTLAFKFQHGVIVAVDSRATAGSYIASQTVKKVIEINPYLLGTMAGGAADCSFWERL 126
Query: 338 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPI 517
L + ++YE + + ++ A +++L+ M+Y + + ++ G D G G +Y D
Sbjct: 127 LARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMVCGWDKRGPG-LYYVDSE 185
Query: 518 GHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERDI 697
G+ + A GS + ++D+ GL++ L+ E+A L + A RD
Sbjct: 186 GNRVCGDLFAVGSGSMYAYGVMDS--GLRH-------DLSVEEACELGRRAIYQATYRDA 236
Query: 698 YTGDSIYILIITAHG 742
Y+G + + + + G
Sbjct: 237 YSGGQVNLYHVHSEG 251
>UniRef50_A2F2T6 Cluster: Proteasome subunit beta type; n=1;
Trichomonas vaginalis G3|Rep: Proteasome subunit beta
type - Trichomonas vaginalis G3
Length = 275
Score = 50.4 bits (115), Expect = 5e-05
Identities = 34/145 (23%), Positives = 69/145 (47%), Gaps = 1/145 (0%)
Frame = +2
Query: 161 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLL 340
G +I A D V+GADTR + G + +D+ KL +S++ + G D + ++
Sbjct: 31 GTTIAAAIFDGGVVLGADTRATAGPIVAVKDEMKLHYISDNIWVCGAGIAADNDNINAVI 90
Query: 341 QARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPY-YVSNVLAGLDSDGKGCVYSYDPI 517
A++++++ +L++ L+ ++ Y + ++ G+D G VY P
Sbjct: 91 SAKLRLFQMNTGLQPRVDQCTNILASRLF--QYMGYIQAALIVGGIDFQGPQ-VYQVAPH 147
Query: 518 GHCARHNFRAGGSAAAQLQPLLDNQ 592
G ++ F A GS + +L+N+
Sbjct: 148 GSFSKQPFIAQGSGSLAAISVLENR 172
>UniRef50_Q8SS01 Cluster: 26S PROTEASOME BETA-TYPE SUBUNIT; n=1;
Encephalitozoon cuniculi|Rep: 26S PROTEASOME BETA-TYPE
SUBUNIT - Encephalitozoon cuniculi
Length = 235
Score = 50.4 bits (115), Expect = 5e-05
Identities = 49/201 (24%), Positives = 86/201 (42%), Gaps = 6/201 (2%)
Frame = +2
Query: 161 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLL 340
G ++V+ D ++GADTR S G +++FK+ + T+LG +G D L + L
Sbjct: 16 GTTVVSFRYRDGIIMGADTRGSYGRLAKLSGVQRIFKVGDQTLLGMSGEISDMQYLVKTL 75
Query: 341 QARMQMYEHEHNKSMTTPAVAQMLSTMLYYKR--FFPYYVSNVLAGLD--SDGKGCVYSY 508
Q E N+ + +M+ +LY R P +S + GL+ SDG ++
Sbjct: 76 TILTQ----EDNRRIDPKGYHKMIQRILYSARSKISPLNLSVCVGGLNAASDGDRRTHTR 131
Query: 509 DPIGHCARH--NFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISA 682
+ + C H NF + L L+N E + RE+A+ L+++
Sbjct: 132 EKMLGCVNHLGNFYFSDVVCTGIGGYLVLPF-LRNRVEGREEEIAREEAIGLVEEAMRIL 190
Query: 683 AERDIYTGDSIYILIITAHGI 745
RD + I + + G+
Sbjct: 191 CYRDCNASNEIQVGYVDDQGV 211
>UniRef50_Q7QVB7 Cluster: Proteasome subunit beta type; n=2; Giardia
intestinalis|Rep: Proteasome subunit beta type - Giardia
lamblia ATCC 50803
Length = 273
Score = 49.2 bits (112), Expect = 1e-04
Identities = 32/147 (21%), Positives = 68/147 (46%), Gaps = 1/147 (0%)
Frame = +2
Query: 149 YADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTL 328
+ G +I+ + ++ ADTR + G + +++KKL ++E + G DT +
Sbjct: 63 FKKTGTTIMGLTFKGGVILAADTRSTGGPVVMNKNKKKLVCINEQMYMAGAGTAADTAAV 122
Query: 329 TRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLY-YKRFFPYYVSNVLAGLDSDGKGCVYS 505
R+ + ++++ ++ + + +++S L+ Y + YV ++AG+D G + S
Sbjct: 123 GRMAASSLRLHAYKTGRKPLVQSAVKLISDHLFRYMGYVSAYV--IIAGVDYKG-AHLCS 179
Query: 506 YDPIGHCARHNFRAGGSAAAQLQPLLD 586
D G F GS Q +L+
Sbjct: 180 IDAHGSITAQPFVTDGSGRLAAQSMLE 206
>UniRef50_Q5CQ43 Cluster: Proteasome subunit beta type; n=2;
Cryptosporidium|Rep: Proteasome subunit beta type -
Cryptosporidium parvum Iowa II
Length = 290
Score = 48.8 bits (111), Expect = 2e-04
Identities = 40/182 (21%), Positives = 84/182 (46%)
Frame = +2
Query: 200 VIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNK 379
++ D+R S G I +++ KK+ ++++ + G D R+L ++YE + +
Sbjct: 92 ILAVDSRASQGSYIASQEVKKIIQINDFLLGTMAGGAADCSYWERVLSKLCRLYELRNGE 151
Query: 380 SMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCARHNFRAGGSA 559
++ ++M++ + ++ R + ++AG D DG +Y D G + + GS
Sbjct: 152 RISVAGASKMITNIFFHYRAYDLSAGIMIAGFDKDGPH-LYYVDNEGSRVKDCKFSVGSG 210
Query: 560 AAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERDIYTGDSIYILIITAH 739
+ +LD+ G + LT E+A+ L K + A RD +G + + I +
Sbjct: 211 SLYAYGVLDS--GYR-------YDLTDEEAIDLGKRAIVIATNRDGGSGGLVRVYQINKN 261
Query: 740 GI 745
G+
Sbjct: 262 GV 263
>UniRef50_O62102 Cluster: Proteasome subunit beta type; n=2;
Caenorhabditis|Rep: Proteasome subunit beta type -
Caenorhabditis elegans
Length = 277
Score = 48.8 bits (111), Expect = 2e-04
Identities = 45/191 (23%), Positives = 87/191 (45%), Gaps = 1/191 (0%)
Frame = +2
Query: 161 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLL 340
G +IVA+A V+GAD+R + G I + +K+ KL+ES G D +T++L
Sbjct: 46 GTTIVAVAFKGGLVMGADSRATAGNIIADKHCEKVHKLTESIYACGAGTAADLDQVTKML 105
Query: 341 QARMQMYE-HEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPI 517
+++ E + K+ A+ Q + Y+ + Y+ ++ G+D G +Y
Sbjct: 106 SGNLRLLELNTGRKARVITALRQAKQHLFNYQGYIGAYL--LIGGVDPTGPH-LYMCSAN 162
Query: 518 GHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERDI 697
G F A GS + +L+ + +T+++A L++ + D
Sbjct: 163 GTTMAFPFTAQGSGSYAAITILERDF---------KVDMTKDEAEKLVQRALEAGMHGDN 213
Query: 698 YTGDSIYILII 730
+G+S+ ++II
Sbjct: 214 ASGNSLNLVII 224
>UniRef50_Q55DY7 Cluster: Proteasome subunit beta type 2; n=1;
Dictyostelium discoideum AX4|Rep: Proteasome subunit
beta type 2 - Dictyostelium discoideum AX4
Length = 198
Score = 48.4 bits (110), Expect = 2e-04
Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 4/130 (3%)
Frame = +2
Query: 209 ADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMT 388
AD+ ++ D+ K+ ++ +L + G D + T + +++Y ++ M+
Sbjct: 17 ADSSVNHSIVKMKDDEDKILEIDGHKLLLSAGEAGDRVQFTEYISKNIKLYSLRNSYPMS 76
Query: 389 TPAVAQMLSTMLYYK-RFFPYYVSNVLAGLDS---DGKGCVYSYDPIGHCARHNFRAGGS 556
TPA A + L R PY ++ +LAG D DG +Y D +G + NF G
Sbjct: 77 TPAAANFIRNELATSIRSHPYSINLILAGYDKEVEDGGTSLYYMDYLGSLQKLNFGCHGY 136
Query: 557 AAAQLQPLLD 586
A+ L LLD
Sbjct: 137 ASYFLLGLLD 146
>UniRef50_P28065 Cluster: Proteasome subunit beta type-9 precursor;
n=79; Eumetazoa|Rep: Proteasome subunit beta type-9
precursor - Homo sapiens (Human)
Length = 219
Score = 48.0 bits (109), Expect = 3e-04
Identities = 47/196 (23%), Positives = 84/196 (42%), Gaps = 1/196 (0%)
Frame = +2
Query: 161 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLL 340
G +I+A+ D V+G+D+R+S G ++ R KL L E +G D + +
Sbjct: 20 GTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCALSGSAADAQAVADMA 79
Query: 341 QARMQMYEHEHNKSMTTPAVAQMLSTMLY-YKRFFPYYVSNVLAGLDSDGKGCVYSYDPI 517
+++++ E + A A ++ + Y Y+ ++ ++AG D G VY
Sbjct: 80 AYQLELHGIELEEPPLVLAAANVVRNISYKYREDLSAHL--MVAGWDQREGGQVYGTLG- 136
Query: 518 GHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERDI 697
G R F GGS + + +D + ++ E+ D A RD
Sbjct: 137 GMLTRQPFAIGGSGSTFIYGYVDAAY---------KPGMSPEECRRFTTDAIALAMSRDG 187
Query: 698 YTGDSIYILIITAHGI 745
+G IY++ ITA G+
Sbjct: 188 SSGGVIYLVTITAAGV 203
>UniRef50_Q7R9U3 Cluster: Proteasome subunit beta type; n=5;
Plasmodium|Rep: Proteasome subunit beta type -
Plasmodium yoelii yoelii
Length = 287
Score = 47.6 bits (108), Expect = 4e-04
Identities = 48/220 (21%), Positives = 99/220 (45%)
Frame = +2
Query: 83 LSVNENFPEYAVPGAKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKK 262
+SV +F +YA K+ F+ + G + +A + ++ D+R S G I +++ +K
Sbjct: 36 ISVPRDFIKYAKTENKK-LFDFH--KGTTTLAFKFKEGIIVAVDSRASMGSFISSQNVEK 92
Query: 263 LFKLSESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFF 442
+ ++++ + G D + L +++YE +N+ ++ A + +LS +LY + +
Sbjct: 93 IIEINKYILGTMAGGAADCFYWEKYLGQIIKIYELRNNEKISVRAASTILSNILYQYKGY 152
Query: 443 PYYVSNVLAGLDSDGKGCVYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVT 622
+L+G D G Y D G N + GS + +LD +
Sbjct: 153 GLCCGIILSGYDHTGFNMFY-IDDEGKKVEGNLFSCGSGSTYAYSILD---------SAY 202
Query: 623 EAPLTREKALALLKDVFISAAERDIYTGDSIYILIITAHG 742
+ L+ E+A+ L ++ A RD +G + + I +G
Sbjct: 203 DYNLSVEQAVELGRNAIYHATFRDGGSGGKVRVFYIHKNG 242
>UniRef50_O23714 Cluster: Proteasome subunit beta type-2-A; n=9;
Magnoliophyta|Rep: Proteasome subunit beta type-2-A -
Arabidopsis thaliana (Mouse-ear cress)
Length = 204
Score = 47.6 bits (108), Expect = 4e-04
Identities = 28/117 (23%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
Frame = +2
Query: 170 IVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLLQAR 349
+ + G+ +A++ ADT ++ ++ K+ L ++ A+G D + T +Q
Sbjct: 4 VFGLVGNGFAIVAADTSAVHSILLHKNNEDKIMVLDSHKLVAASGEPGDRVQFTEYVQKN 63
Query: 350 MQMYEHEHNKSMTTPAVAQMLSTMLYYK-RFFPYYVSNVLAGLDSDGKGCVYSYDPI 517
+ +Y+ + +TT A A L R PY V+ ++AG D + +Y D I
Sbjct: 64 VSLYKFRNGIPLTTAAAANFTRGELATALRKNPYSVNILMAGYDDESGASLYYIDYI 120
>UniRef50_Q00WK9 Cluster: Proteasome subunit beta type; n=2;
Ostreococcus|Rep: Proteasome subunit beta type -
Ostreococcus tauri
Length = 265
Score = 47.2 bits (107), Expect = 5e-04
Identities = 54/223 (24%), Positives = 90/223 (40%), Gaps = 10/223 (4%)
Frame = +2
Query: 125 AKQHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATG 304
A HR P A +I+A+ D V+GAD+R STG + R K+ + E+ + +G
Sbjct: 37 ATTHRAPPRARAQTTIMAVKYADGVVLGADSRTSTGTYVANRASDKITPICENVWMCRSG 96
Query: 305 CWCDTLTLTRLLQARMQMY---------EHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVS 457
DT + + Q + + + VA + + Y +
Sbjct: 97 SAADTQNVAAYVSRLAQEHAVSVSSAGADADEGIKCDVKLVANITQKIAYQNK-DRLQAG 155
Query: 458 NVLAGLDSDGKGCVYSYDPIGHCARHN-FRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPL 634
++AG D VY P+G N F GGS +A + D+ +NM
Sbjct: 156 MIIAGYDRKLGPQVYGI-PLGGAMMENPFTVGGSGSAYIYGWCDDTF-RENM-------- 205
Query: 635 TREKALALLKDVFISAAERDIYTGDSIYILIITAHGIQEEKFE 763
++E+A A +K A RD +G I ++ I A G+ + +
Sbjct: 206 SKEEAQAWVKRAISLAIARDASSGGVIRLVTIDATGVSRQMIQ 248
>UniRef50_UPI000023D2A5 Cluster: hypothetical protein FG06803.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG06803.1 - Gibberella zeae PH-1
Length = 235
Score = 46.4 bits (105), Expect = 9e-04
Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 5/135 (3%)
Frame = +2
Query: 170 IVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLLQAR 349
++ I G D+ +I A G +I K L++ T+L +G DT+ +Q
Sbjct: 9 LLGITGKDFTIIAASKAAMRGATILKTTDDKTRALNKHTLLAFSGEAGDTVQFAEYIQRN 68
Query: 350 MQMYEHEHNKSMTTPAVAQM----LSTMLYYKRFFPYYVSNVLAGLDS-DGKGCVYSYDP 514
Q+Y + ++ A+A L+T L ++ PY V+ ++ G+D GK +Y D
Sbjct: 69 AQLYSMRNESDLSPSALAHFVRGELATSLRSRK--PYNVNLLMGGVDPITGKPSLYWLDY 126
Query: 515 IGHCARHNFRAGGSA 559
+ A + A G A
Sbjct: 127 LASLAEVPYAAHGYA 141
>UniRef50_A4RRA7 Cluster: Proteasome subunit beta type; n=2;
Ostreococcus|Rep: Proteasome subunit beta type -
Ostreococcus lucimarinus CCE9901
Length = 246
Score = 46.0 bits (104), Expect = 0.001
Identities = 42/174 (24%), Positives = 73/174 (41%), Gaps = 4/174 (2%)
Frame = +2
Query: 161 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLL 340
G +IVA V+GAD+R+STG + R K+ L++ T++ +G DT L +
Sbjct: 17 GTTIVACEYAGGVVLGADSRVSTGIYVSNRASDKMCALNDRTIMCRSGSAADTEALAGYV 76
Query: 341 QARMQMYEHEHNKSMTTPAVAQMLSTMLYY----KRFFPYYVSNVLAGLDSDGKGCVYSY 508
+ + +E E ++ VA + + + Y R ++ G D VY+
Sbjct: 77 RNIVSQHEMELDEIADVKTVATIANQIGYQNKGANRGRGLSAYTIVGGWDKRRGSQVYAC 136
Query: 509 DPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDV 670
G+ + + GS + + LD+ G + E KA+AL V
Sbjct: 137 TAGGNMIKERWTTDGSGSTYIWGFLDS--GWREGMTREECEAFVAKAIALAMSV 188
>UniRef50_O23717 Cluster: Proteasome subunit beta type-5-A
precursor; n=13; Viridiplantae|Rep: Proteasome subunit
beta type-5-A precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 274
Score = 45.6 bits (103), Expect = 0.002
Identities = 36/143 (25%), Positives = 65/143 (45%)
Frame = +2
Query: 200 VIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNK 379
++ AD+R S G I ++ KK+ +++ + G D R L + +++E + +
Sbjct: 70 MVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKR 129
Query: 380 SMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCARHNFRAGGSA 559
++ +++L+ MLY R V ++AG D G G Y + G F GS
Sbjct: 130 RISVSGASKLLANMLYSYRGMGLSVGTMIAGWDETGPGLYYVDNEGGRLKGDRFSV-GSG 188
Query: 560 AAQLQPLLDNQIGLKNMQNVTEA 628
+ +LD+ G K +V EA
Sbjct: 189 SPYAYGVLDS--GYKYDMSVEEA 209
>UniRef50_Q99436 Cluster: Proteasome subunit beta type-7 precursor;
n=44; Fungi/Metazoa group|Rep: Proteasome subunit beta
type-7 precursor - Homo sapiens (Human)
Length = 277
Score = 45.2 bits (102), Expect = 0.002
Identities = 41/192 (21%), Positives = 83/192 (43%), Gaps = 1/192 (0%)
Frame = +2
Query: 161 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLL 340
G +I + D V+GADTR + G + ++ K+ +S + G DT T+L+
Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLI 102
Query: 341 QARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYY-VSNVLAGLDSDGKGCVYSYDPI 517
+ ++++ + +ML ML+ R+ Y + VL G+D G +YS P
Sbjct: 103 SSNLELHSLSTGRLPRVVTANRMLKQMLF--RYQGYIGAALVLGGVDVTGPH-LYSIYPH 159
Query: 518 GHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERDI 697
G + + GS + + +++ + E+A L+ + + D+
Sbjct: 160 GSTDKLPYVTMGSGSLAAMAVFEDKF---------RPDMEEEEAKNLVSEAIAAGIFNDL 210
Query: 698 YTGDSIYILIIT 733
+G +I + +I+
Sbjct: 211 GSGSNIDLCVIS 222
>UniRef50_P28074 Cluster: Proteasome subunit beta type-5 precursor;
n=48; Eukaryota|Rep: Proteasome subunit beta type-5
precursor - Homo sapiens (Human)
Length = 208
Score = 45.2 bits (102), Expect = 0.002
Identities = 38/181 (20%), Positives = 78/181 (43%)
Frame = +2
Query: 200 VIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNK 379
++ AD+R + G I ++ KK+ +++ + G D RLL + ++YE + +
Sbjct: 17 IVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKE 76
Query: 380 SMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCARHNFRAGGSA 559
++ A +++L+ M+Y + + ++ G D G G +Y D G+ + GS
Sbjct: 77 RISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPG-LYYVDSEGNRISGATFSVGSG 135
Query: 560 AAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERDIYTGDSIYILIITAH 739
+ ++D L E+A L + A RD Y+G ++ + +
Sbjct: 136 SVYAYGVMDRGYSY---------DLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVRED 186
Query: 740 G 742
G
Sbjct: 187 G 187
>UniRef50_UPI000049877C Cluster: proteasome beta subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome beta
subunit - Entamoeba histolytica HM-1:IMSS
Length = 262
Score = 44.8 bits (101), Expect = 0.003
Identities = 41/186 (22%), Positives = 78/186 (41%), Gaps = 1/186 (0%)
Frame = +2
Query: 200 VIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNK 379
V+ D+R + G + + KL KL+ + G G D T + ++ ++ +
Sbjct: 40 VLACDSRATVGPIVADKACMKLHKLAPNIYCGGAGTAADLTHATNFIATKLGVHRFTIGQ 99
Query: 380 SMTTPAVAQMLSTMLY-YKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCARHNFRAGGS 556
ML L+ Y Y+ V+ G D G Y G ++HN+ + GS
Sbjct: 100 MPRVDTAVTMLKRHLFPYGGHIGAYL--VVGGYDYTGAHLWGVYAD-GSTSQHNYYSLGS 156
Query: 557 AAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERDIYTGDSIYILIITA 736
+ +LD+Q +N LTRE+ + L ++ D+ +G + + +I
Sbjct: 157 GSIAATTMLDDQWN----EN-----LTREEGVKLATQAILAGIFNDMGSGGRVNVCVIDK 207
Query: 737 HGIQEE 754
+G++E+
Sbjct: 208 NGVEEK 213
>UniRef50_Q9XUV0 Cluster: Proteasome subunit beta type; n=2;
Caenorhabditis|Rep: Proteasome subunit beta type -
Caenorhabditis elegans
Length = 284
Score = 44.8 bits (101), Expect = 0.003
Identities = 31/130 (23%), Positives = 56/130 (43%)
Frame = +2
Query: 200 VIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNK 379
++ D+R S+G I ++ K+ + + V G D TR++ +YE
Sbjct: 84 IVAVDSRASSGEYISSKSVMKILDIGDRMVATMAGGAADCQFWTRIVAKYCTLYELREKT 143
Query: 380 SMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCARHNFRAGGSA 559
S+T A ++ + LY R V +++AG D G ++ D G + + GS
Sbjct: 144 SITVSAASKYFANTLYGYRGQGLSVGSMVAGYDKKGPQ-IFKVDSEGDRCQLKVCSVGSG 202
Query: 560 AAQLQPLLDN 589
+ +LDN
Sbjct: 203 SLNAYGILDN 212
>UniRef50_P40306 Cluster: Proteasome subunit beta type-10 precursor;
n=28; Eukaryota|Rep: Proteasome subunit beta type-10
precursor - Homo sapiens (Human)
Length = 273
Score = 44.8 bits (101), Expect = 0.003
Identities = 47/214 (21%), Positives = 92/214 (42%), Gaps = 2/214 (0%)
Frame = +2
Query: 107 EYAVPGAKQHRFEPYADNGGSIVA-IAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSES 283
E +PG K P+A G+ +A + D ++GADTR + + + +K+ ++
Sbjct: 24 ERVLPGLKV----PHARKTGTTIAGLVFQDGVILGADTRATNDSVVADKSCEKIHFIAPK 79
Query: 284 TVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYY-VSN 460
G D TR++ ++M+++ + V ++L L+ R+ + S
Sbjct: 80 IYCCGAGVAADAEMTTRMVASKMELHALSTGREPRVATVTRILRQTLF--RYQGHVGASL 137
Query: 461 VLAGLDSDGKGCVYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTR 640
++ G+D G +Y P G +R F A GS +L+++ + +T
Sbjct: 138 IVGGVDLTGPQ-LYGVHPHGSYSRLPFTALGSGQDAALAVLEDRF---------QPNMTL 187
Query: 641 EKALALLKDVFISAAERDIYTGDSIYILIITAHG 742
E A LL + + D+ +G ++ +IT G
Sbjct: 188 EAAQGLLVEAVTAGILGDLGSGGNVDACVITKTG 221
>UniRef50_Q00U03 Cluster: 20S proteasome beta 4 subunit; n=3;
Viridiplantae|Rep: 20S proteasome beta 4 subunit -
Ostreococcus tauri
Length = 767
Score = 44.4 bits (100), Expect = 0.003
Identities = 29/124 (23%), Positives = 56/124 (45%), Gaps = 1/124 (0%)
Frame = +2
Query: 170 IVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLLQAR 349
+ G D+AV+ AD + + D+ K+ + + ++ +G D + + A
Sbjct: 4 VFGFVGYDFAVLVADRAATQQIIVQKSDEDKIAVVDGTKIMATSGPRGDCVAFAEYVAAN 63
Query: 350 MQMYEHEHNKSMTTPAVAQMLSTMLYYK-RFFPYYVSNVLAGLDSDGKGCVYSYDPIGHC 526
+++Y ++ + A A L R PY V+ +LAG+D++G +Y D + C
Sbjct: 64 VRLYRLKYQHELDVKATAHYARNELATALRKGPYQVNALLAGVDANGPE-LYFMDYLATC 122
Query: 527 ARHN 538
R N
Sbjct: 123 HRVN 126
>UniRef50_Q9AW13 Cluster: Proteasome subunit beta type; n=1;
Guillardia theta|Rep: Proteasome subunit beta type -
Guillardia theta (Cryptomonas phi)
Length = 198
Score = 44.0 bits (99), Expect = 0.005
Identities = 37/173 (21%), Positives = 74/173 (42%)
Frame = +2
Query: 149 YADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTL 328
Y + G +I+++ + +IG+D++++ G I R+ K+F+LS+ V +G D L
Sbjct: 4 YVNLGTTIISLKYINGIIIGSDSKVNIGSFISNRNSDKVFQLSKFIVCCRSGKSADNQNL 63
Query: 329 TRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSY 508
L+ + E + + + V Q + T++Y + + AG D Y
Sbjct: 64 CDKLKNYVIEKEFIYGRHVLVREVVQFIKTLMYNCNL---ECTMICAGWDCTNGFQNYLI 120
Query: 509 DPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKD 667
G + + G + + L+DN E +T+ ++A+ KD
Sbjct: 121 TNGGGLIQKSIIVNGGGSNYISGLIDNNFNETMSLEECEKLITKSLSIAINKD 173
>UniRef50_Q7QT27 Cluster: Proteasome subunit beta type; n=2; Giardia
intestinalis|Rep: Proteasome subunit beta type - Giardia
lamblia ATCC 50803
Length = 294
Score = 44.0 bits (99), Expect = 0.005
Identities = 40/202 (19%), Positives = 85/202 (42%)
Frame = +2
Query: 137 RFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCD 316
RF P ++G + +A ++ D+R + G + + +K+ +++ + G D
Sbjct: 76 RFHP--NHGTTTIAFCFRGGILLAVDSRSTQGQFVSSGVVQKVIEITPHILGTIAGVAGD 133
Query: 317 TLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGC 496
R L + ++YE E+ + + + +++ + L+ + V +++G DS C
Sbjct: 134 CQFWERDLGRKCRLYELENGERIYASSASKLFISTLHSQSGADMSVGAMISGFDSTNHPC 193
Query: 497 VYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFI 676
+Y D G GS + ++D + + +T E+A+AL K
Sbjct: 194 IYYCDSEGTRIGGYLYGAGSGSTFAFGIVDTEYDFE---------MTEEQAIALGKKAIY 244
Query: 677 SAAERDIYTGDSIYILIITAHG 742
A RD +G + + +I G
Sbjct: 245 HAVSRDAMSGGMLNVYVIRPGG 266
>UniRef50_Q23TC6 Cluster: Proteasome subunit alpha type 7-like,
putative; n=5; Oligohymenophorea|Rep: Proteasome subunit
alpha type 7-like, putative - Tetrahymena thermophila
SB210
Length = 242
Score = 44.0 bits (99), Expect = 0.005
Identities = 42/176 (23%), Positives = 77/176 (43%), Gaps = 4/176 (2%)
Frame = +2
Query: 173 VAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLLQARM 352
+ I G D V+G + +T TR +K+ +L ++T + +G D LT + +
Sbjct: 33 IGIRGTDCIVMGVEKNPTTILQ-ETRTIRKVQRLDDATCICYSGLTPDARILTNIAKVEC 91
Query: 353 QMYEHEHNKSMTTPAVAQMLSTML--YYKRFF--PYYVSNVLAGLDSDGKGCVYSYDPIG 520
Q Y ++ + +A+ ++++ Y ++ P+ +S ++ G DS G+ ++ DP G
Sbjct: 92 QSYSLNYDDRVPINYIARYIASVQQKYTQKSGARPFGISTLVGGFDSKGQPRLFQTDPSG 151
Query: 521 HCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAE 688
C A G + L+ KN Q E L EK L L V + +
Sbjct: 152 ACTEWKAVALGKHRKTVMENLE-----KNYQ---EEYLAEEKCLELACRVLLEVVQ 199
>UniRef50_Q7DLS1 Cluster: Proteasome subunit beta type-7-B
precursor; n=28; Eukaryota|Rep: Proteasome subunit beta
type-7-B precursor - Arabidopsis thaliana (Mouse-ear
cress)
Length = 274
Score = 44.0 bits (99), Expect = 0.005
Identities = 37/195 (18%), Positives = 86/195 (44%)
Frame = +2
Query: 149 YADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTL 328
+ G +IV + D ++GADTR + G + ++ +K+ ++ + G DT +
Sbjct: 35 FLKTGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAV 94
Query: 329 TRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSY 508
T ++ ++++++ ++ + +L L+ + + VL G+D G +++
Sbjct: 95 TDMVSSQLRLHRYQTGRDSRVVTALTLLKKHLFSYQGH-VSAALVLGGVDITGPH-LHTI 152
Query: 509 DPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAE 688
P G F GS + + + + + LTR++ + L+ + S
Sbjct: 153 YPHGSTDTLPFATMGSGSLAAMSVFEAKY---------KEGLTRDEGIKLVAEAICSGIF 203
Query: 689 RDIYTGDSIYILIIT 733
D+ +G ++ I +IT
Sbjct: 204 NDLGSGSNVDICVIT 218
>UniRef50_O96788 Cluster: Proteasome subunit alpha type-1; n=10;
Trypanosomatidae|Rep: Proteasome subunit alpha type-1 -
Trypanosoma brucei rhodesiense
Length = 266
Score = 44.0 bits (99), Expect = 0.005
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 5/116 (4%)
Frame = +2
Query: 155 DNGGSIVAIAGDDYAVIGADTRLS-TGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLT 331
+NG + V + G DY V+ A R +G S Y Q+K FKL E + +G D L+
Sbjct: 30 NNGSAAVGVKGADYVVLTALKRNPVSGLSSY---QEKAFKLDEHVGMAISGLVADGRALS 86
Query: 332 RLLQARMQMYEHEHNKSMTTPAVAQMLSTM----LYYKRFFPYYVSNVLAGLDSDG 487
R L+ Y + H+ +A ++ + + P+ V ++AG D G
Sbjct: 87 RFLRTECMNYRYMHDSDAPLVMLADIVGAKHQRHIQFAGKRPFGVGLLIAGYDRQG 142
>UniRef50_A1UHS7 Cluster: 20S proteasome, A and B subunits; n=19;
Corynebacterineae|Rep: 20S proteasome, A and B subunits
- Mycobacterium sp. (strain KMS)
Length = 304
Score = 43.6 bits (98), Expect = 0.006
Identities = 51/213 (23%), Positives = 83/213 (38%), Gaps = 15/213 (7%)
Frame = +2
Query: 158 NGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRL 337
+G +IVA+ V+ D R + G I +RD +K++ + T G G + RL
Sbjct: 64 HGTTIVALKFPGGVVMAGDRRATQGNMIASRDVQKVYITDDYTATGIAGTAAIAVEFARL 123
Query: 338 LQARMQMYEHEHNKSMTTPAVAQMLSTML---YYKRFFPYYVSNVLAGLDSD-----GKG 493
++ YE ++T L+TM+ + +LAG D D G
Sbjct: 124 YAVELEHYEKLEGVALTFAGKVNRLATMVRGNLGAALQGFVALPLLAGFDLDDPDPQAAG 183
Query: 494 CVYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVF 673
+ S+D G HN G + + K VT+A + AL + +
Sbjct: 184 RIVSFDAAG---GHNLEEEGFQSVGSGSIFAKSSMKKLYHQVTDA----DSALRVAVEAL 236
Query: 674 ISAAERDIYTGDSIYI-------LIITAHGIQE 751
AA+ D TG + ++ITA G +E
Sbjct: 237 YDAADDDSATGGPDLVRGIFPTAVLITADGAEE 269
>UniRef50_A1R6Q7 Cluster: Putative 20S proteasome beta-subunit; n=1;
Arthrobacter aurescens TC1|Rep: Putative 20S proteasome
beta-subunit - Arthrobacter aurescens (strain TC1)
Length = 324
Score = 42.7 bits (96), Expect = 0.011
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 4/129 (3%)
Frame = +2
Query: 146 PYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLT 325
P + + +IVA+ ++ D R + G I +R +K+F E +VLG G +
Sbjct: 96 PSSPHATTIVALTYAGGVLMAGDRRATMGNIIASRHIEKVFPADEYSVLGIAGTAGLAID 155
Query: 326 LTRLLQARMQMYEHEHNKSMTTPAVAQMLSTML---YYKRFFPYYVSNVLAGLDS-DGKG 493
+TRL Q ++ YE ++ A L M+ V + AG D G G
Sbjct: 156 ITRLFQVELEHYEKIEGTLLSLVGKANRLGAMIRGNLPMAMQGMAVIPLFAGFDQVAGVG 215
Query: 494 CVYSYDPIG 520
++SYD G
Sbjct: 216 RLFSYDVTG 224
>UniRef50_Q5TBG5 Cluster: Proteasome (Prosome, macropain) subunit,
beta type, 7; n=2; Euteleostomi|Rep: Proteasome
(Prosome, macropain) subunit, beta type, 7 - Homo
sapiens (Human)
Length = 210
Score = 42.7 bits (96), Expect = 0.011
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 1/121 (0%)
Frame = +2
Query: 161 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLL 340
G +I + D V+GADTR + G + ++ K+ +S + G DT T+L+
Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLI 102
Query: 341 QARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYY-VSNVLAGLDSDGKGCVYSYDPI 517
+ ++++ + +ML ML+ R+ Y + VL G+D G +YS P
Sbjct: 103 SSNLELHSLSTGRLPRVVTANRMLKQMLF--RYQGYIGAALVLGGVDVTGPH-LYSIYPH 159
Query: 518 G 520
G
Sbjct: 160 G 160
>UniRef50_P28062 Cluster: Proteasome subunit beta type-8 precursor;
n=93; Metazoa|Rep: Proteasome subunit beta type-8
precursor - Homo sapiens (Human)
Length = 276
Score = 42.3 bits (95), Expect = 0.014
Identities = 41/183 (22%), Positives = 76/183 (41%)
Frame = +2
Query: 158 NGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRL 337
+G + +A + D+R S G I K+ +++ + +GC D RL
Sbjct: 71 HGTTTLAFKFQHGVIAAVDSRASAGSYISALRVNKVIEINPYLLGTMSGCAADCQYWERL 130
Query: 338 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPI 517
L ++Y + + ++ A +++LS M+ R + +++ G D G G +Y D
Sbjct: 131 LAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKKGPG-LYYVDEH 189
Query: 518 GHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERDI 697
G N + GS ++D+ G + L+ E+A L + A RD
Sbjct: 190 GTRLSGNMFSTGSGNTYAYGVMDS--GYR-------PNLSPEEAYDLGRRAIAYATHRDS 240
Query: 698 YTG 706
Y+G
Sbjct: 241 YSG 243
>UniRef50_Q4MZR6 Cluster: 20S proteasome beta 7 subunit, putative;
n=2; Theileria|Rep: 20S proteasome beta 7 subunit,
putative - Theileria parva
Length = 229
Score = 41.9 bits (94), Expect = 0.019
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 9/211 (4%)
Frame = +2
Query: 161 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLL 340
G SI+A+ ++ ++ DT+ S G + +L +S +T+ +G D LTR+L
Sbjct: 7 GASIIAMKYNEGVLMMTDTKWSLGRMARYMNVLRLESVSSNTLFATSGDAADHQYLTRVL 66
Query: 341 QARMQMYEHEHN----KSMTTP-AVAQMLSTMLYYKR--FFPYYVSNVLAGLDSDGKGCV 499
+ + EHN K++ P + S +LY++R P VS V+ GL S+GK +
Sbjct: 67 KHAVHTDLLEHNNDASKALLNPEMLLNYTSRLLYHRRTKLDPVLVSAVVGGL-SNGKPFL 125
Query: 500 YSYDPIGHCARHNFRAGG-SAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFI 676
D G NF G + PL + +N +++EA +E AL ++ +++
Sbjct: 126 GYTDYYGTKYTDNFVVTGLGKYFAIGPLREEH---RNDMSLSEA---KELALKCMRVLYL 179
Query: 677 SAAERDIYTGDSIYILIITAHGI-QEEKFEL 766
RD + + + G+ EE F L
Sbjct: 180 ----RDCQASVRVQVGFVNKDGVFVEEPFVL 206
>UniRef50_P22141 Cluster: Proteasome component C11; n=36;
Ascomycota|Rep: Proteasome component C11 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 198
Score = 41.9 bits (94), Expect = 0.019
Identities = 35/145 (24%), Positives = 64/145 (44%), Gaps = 5/145 (3%)
Frame = +2
Query: 170 IVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLLQAR 349
I+ I D ++ + ++ G S+ K +LS T++ G DT+ +QA
Sbjct: 4 ILGIRVQDSVILASSKAVTRGISVLKDSDDKTRQLSPHTLMSFAGEAGDTVQFAEYIQAN 63
Query: 350 MQMY----EHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLD-SDGKGCVYSYDP 514
+Q+Y ++E + + V Q L+ + +R PY V+ ++ G D K +Y D
Sbjct: 64 IQLYSIREDYELSPQAVSSFVRQELAKSIRSRR--PYQVNVLIGGYDKKKNKPELYQIDY 121
Query: 515 IGHCARHNFRAGGSAAAQLQPLLDN 589
+G + A G + LLD+
Sbjct: 122 LGTKVELPYGAHGYSGFYTFSLLDH 146
>UniRef50_Q9U570 Cluster: Proteasome subunit beta type; n=6;
Plasmodium|Rep: Proteasome subunit beta type -
Plasmodium falciparum
Length = 265
Score = 41.5 bits (93), Expect = 0.025
Identities = 29/112 (25%), Positives = 55/112 (49%), Gaps = 5/112 (4%)
Frame = +2
Query: 161 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLL 340
G S++AI +I AD + S G ++ +++FK++ TV+G +G D L LL
Sbjct: 9 GTSVIAIKYKHGIMIAADRKASYGSYAKFQNVERIFKINNKTVMGFSGELADAQYLHELL 68
Query: 341 QAR--MQMYEHEHNKSMTTPAVAQMLSTMLYY---KRFFPYYVSNVLAGLDS 481
+ + E + + M TP + ++Y R P + + ++AG++S
Sbjct: 69 TRKNINNLSEKKRKEDMYTPQHYHSYVSRVFYVRKNRIDPLFNNIIIAGINS 120
>UniRef50_A7AVH7 Cluster: Proteasome subunit beta type 4; n=1;
Babesia bovis|Rep: Proteasome subunit beta type 4 -
Babesia bovis
Length = 226
Score = 41.5 bits (93), Expect = 0.025
Identities = 44/185 (23%), Positives = 85/185 (45%), Gaps = 8/185 (4%)
Frame = +2
Query: 245 TRDQKKLFKLSESTVLGATGCWCDTLTLTRLLQA--RMQMYEHEHNKS---MTTPAVAQM 409
T + +++ KL++ T+ +G D +T+LLQA R +M ++ ++ + + A+
Sbjct: 32 TNNVQRIEKLAKDTIFCTSGDVADHQYITQLLQATVRREMLDNNNDHASCHLGPEALHNY 91
Query: 410 LSTMLYYKR--FFPYYVSNVLAGLDSDGKGCVYSYDPIGHCARHNFRAGGSAAAQLQPLL 583
L + Y +R P + S ++AG+ +G Y+ D G + +F G +
Sbjct: 92 LGRVFYARRSKMNPLWNSAIVAGVSQNGPFLGYA-DMYGTQYKDDFVVTG---------M 141
Query: 584 DNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERDIYTGDSIYILIITAHGIQ-EEKF 760
+ ++ +T++ A AL D RD GD I I +TA GI+ EE
Sbjct: 142 GKYFAIGPLREKHNPNMTKDAARALAIDCMRLLYLRDCSAGDRIQIAYVTAQGIELEEPM 201
Query: 761 ELRKD 775
+++ +
Sbjct: 202 QIQAE 206
>UniRef50_Q8T8V8 Cluster: Proteasome subunit beta type; n=13;
Neoptera|Rep: Proteasome subunit beta type - Drosophila
melanogaster (Fruit fly)
Length = 315
Score = 41.1 bits (92), Expect = 0.033
Identities = 39/196 (19%), Positives = 85/196 (43%)
Frame = +2
Query: 155 DNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTR 334
D+G + + ++ AD+R ++G I ++ +K+ +L++ + G D + R
Sbjct: 69 DHGTTTLGFKYRGGVILCADSRATSGQYIGSQTMRKIVELNDYMLGTLAGGAADCVYWDR 128
Query: 335 LLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDP 514
+L ++++ + K MT A+++ + + + +LAG D +G +Y D
Sbjct: 129 VLAKECRLHQLRYRKRMTVDTAARIICNISTEYKGMGLVMGMMLAGFDDEGPKLIY-VDS 187
Query: 515 IGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERD 694
G + + GS + +LD G + L+ ++A L + A +D
Sbjct: 188 EGMRSHGQVFSVGSGSPYALGVLDT--GYR-------YDLSDQEAYDLARRAIYHATSKD 238
Query: 695 IYTGDSIYILIITAHG 742
Y+G + + I + G
Sbjct: 239 AYSGGIVRLYHIHSEG 254
>UniRef50_Q7R5Z3 Cluster: GLP_81_66910_67563; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_81_66910_67563 - Giardia lamblia
ATCC 50803
Length = 217
Score = 40.7 bits (91), Expect = 0.043
Identities = 46/196 (23%), Positives = 82/196 (41%), Gaps = 2/196 (1%)
Frame = +2
Query: 161 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLL 340
GG++VA+A D ++ ADT L+ G + T + +++ + T++G TG D L
Sbjct: 7 GGTVVAVAHKDGVLMAADTVLNYGSTRRTDNYERIIPVGTHTLIGFTGDEADFKDSLYTL 66
Query: 341 QARMQMYEHEHNKSMTTPAVAQMLSTMLYYKR--FFPYYVSNVLAGLDSDGKGCVYSYDP 514
++ + +T + L+T Y R P Y ++ G + + D
Sbjct: 67 KSMHREARCHGTPPPSTREIHGFLATRNYSSRLEMDPIYNGYIIGGCEPGESPYIGVVDL 126
Query: 515 IGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERD 694
G +F A G P+L + G K +++++A+ALL + + A D
Sbjct: 127 RGTQFTASFFATGMGRHYALPVL--REGWK-------PGISKDEAVALLLESLKTLAFND 177
Query: 695 IYTGDSIYILIITAHG 742
G S I T+ G
Sbjct: 178 AAAGSSFIICEATSDG 193
>UniRef50_Q4UI67 Cluster: Proteasome subunit beta type; n=3;
Piroplasmida|Rep: Proteasome subunit beta type -
Theileria annulata
Length = 270
Score = 40.7 bits (91), Expect = 0.043
Identities = 24/114 (21%), Positives = 52/114 (45%)
Frame = +2
Query: 161 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLL 340
G + + D ++ D+R S G + T++ K+ +++ + G D R L
Sbjct: 55 GTTTLGFIFDQGVILAVDSRASMGPIVSTQNVSKVIEINSYLLGTMAGGAADCSYWERHL 114
Query: 341 QARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVY 502
+++E + ++ A +Q+L+ + YY + + ++AG D +G G Y
Sbjct: 115 AKLCRLHELRNQCRISVGAASQILANIFYYFKGYGLSAGTMIAGYDLNGPGLYY 168
>UniRef50_Q4Q1Q9 Cluster: Proteasome subunit beta type; n=8;
Trypanosomatidae|Rep: Proteasome subunit beta type -
Leishmania major
Length = 302
Score = 40.7 bits (91), Expect = 0.043
Identities = 31/142 (21%), Positives = 64/142 (45%)
Frame = +2
Query: 161 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLL 340
G + +A + ++ D+R STG I ++ K+ ++++ + G D R+L
Sbjct: 99 GTTTLAFRFNGGIIVAVDSRASTGQYIASQTVLKVLEINDYLLGTLAGGAADCQYWERVL 158
Query: 341 QARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG 520
+++E + +T A +++L+ + Y R + +LAG D G +Y D G
Sbjct: 159 GMECRLWELRNGSRITVAAASKILANITYAYRNHGLSMGTMLAGWDEFGPS-LYYVDDKG 217
Query: 521 HCARHNFRAGGSAAAQLQPLLD 586
+ + + GS + +LD
Sbjct: 218 SRVKQDLFSVGSGSIYAYGVLD 239
>UniRef50_A2F3X4 Cluster: Family T1, proteasome beta subunit,
threonine peptidase; n=1; Trichomonas vaginalis G3|Rep:
Family T1, proteasome beta subunit, threonine peptidase
- Trichomonas vaginalis G3
Length = 214
Score = 40.7 bits (91), Expect = 0.043
Identities = 27/122 (22%), Positives = 58/122 (47%), Gaps = 3/122 (2%)
Frame = +2
Query: 164 GSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLLQ 343
G+IVA D ++ +D ++ G + +++ + ++GA+G + D TL +++
Sbjct: 8 GAIVAAKYDGGILLASDLSITYGSMFRHNNVSHFVEVAPNIIIGASGEFADFQTLIEVIK 67
Query: 344 ARMQMYEHEHN-KSMTTPAVAQMLSTMLYYKR--FFPYYVSNVLAGLDSDGKGCVYSYDP 514
+ + + +HN + +T V + +Y R P ++AG++ DG + DP
Sbjct: 68 SVILQQQCKHNGEYLTASEVHNYIKRYMYQCRSNMKPLSCKVIVAGINPDGSKFLACTDP 127
Query: 515 IG 520
G
Sbjct: 128 YG 129
>UniRef50_A0D881 Cluster: Proteasome subunit beta type; n=1;
Paramecium tetraurelia|Rep: Proteasome subunit beta type
- Paramecium tetraurelia
Length = 206
Score = 40.7 bits (91), Expect = 0.043
Identities = 39/178 (21%), Positives = 73/178 (41%), Gaps = 1/178 (0%)
Frame = +2
Query: 137 RFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCD 316
+FEP G +I+A+ D +IGAD+R S+G + R K+ + + +G D
Sbjct: 10 KFEPET-TGTTIMAVIYDGGLIIGADSRTSSGQFVADRCADKIDYIHDRIFCLRSGAAAD 68
Query: 317 TLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLY-YKRFFPYYVSNVLAGLDSDGKG 493
T +T+ ++ + + E + A + LY YK S ++AG D
Sbjct: 69 TQIITKHVRYYVDAHAQELGRLPAVATAANLFRNFLYEYKDSMS--ASIIVAGWDPYKGP 126
Query: 494 CVYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKD 667
+++ G + GGS + + D+ Q ++ + A A+ +D
Sbjct: 127 QIFTLPLGGSVIEQKWSIGGSGSTFIWGFCDSNYQSMLNQIMSRTFVLHAVAHAMFRD 184
>UniRef50_Q4P203 Cluster: Proteasome subunit beta type; n=1;
Ustilago maydis|Rep: Proteasome subunit beta type -
Ustilago maydis (Smut fungus)
Length = 266
Score = 40.3 bits (90), Expect = 0.057
Identities = 49/209 (23%), Positives = 86/209 (41%), Gaps = 4/209 (1%)
Frame = +2
Query: 134 HRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWC 313
H +P G S++ I D ++ DT S G D ++ + ++T++GA+G
Sbjct: 40 HTSQPIV-TGTSVLGIKYKDGIMLATDTLASYGSLARFMDITRISQFGQNTLIGASGDMS 98
Query: 314 DTLTLTRLLQARMQMYEHEHNKSMTTPA-VAQMLSTMLYYKR--FFPYYVSNVLAGLD-S 481
D + +L + + + TP + L+ ++Y +R P + S VL G+D
Sbjct: 99 DWQYVQHMLNKLITSEDVAADGHNLTPTQIYAYLARVMYQRRSKINPLWNSFVLGGVDPK 158
Query: 482 DGKGCVYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALL 661
DG + D +G + A G QPL L+ M E LT +A +L
Sbjct: 159 DGTPFLGYVDLLGTTFTSSTIATGFGLHLAQPL------LRKMVEGREDTLTEAEAKEIL 212
Query: 662 KDVFISAAERDIYTGDSIYILIITAHGIQ 748
++ RD + + I +T G +
Sbjct: 213 ENCMKVLFYRDARSLNRFRIAKVTRDGCE 241
>UniRef50_Q9VK14 Cluster: Proteasome subunit alpha type; n=2;
Sophophora|Rep: Proteasome subunit alpha type -
Drosophila melanogaster (Fruit fly)
Length = 289
Score = 39.9 bits (89), Expect = 0.075
Identities = 34/151 (22%), Positives = 59/151 (39%), Gaps = 6/151 (3%)
Frame = +2
Query: 161 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLL 340
G + V + G DYAV+ A R S + Q+K+ + + + G D + + +
Sbjct: 32 GAATVGLKGTDYAVLAALCRTSKDTNTL---QRKIMPVDDHVGMSIAGLTADARVVCQYM 88
Query: 341 QARMQMYEHEHNKSMTTPAVAQML------STMLYYKRFFPYYVSNVLAGLDSDGKGCVY 502
+ Y H +N + L +T Y +R PY V ++AG D G +Y
Sbjct: 89 RTECMAYRHSYNAEFPVRRLVSNLGNKLQTTTQRYDRR--PYGVGLLVAGYDEQGPH-IY 145
Query: 503 SYDPIGHCARHNFRAGGSAAAQLQPLLDNQI 595
P + A GS + + L+ +
Sbjct: 146 QVMPTANVLNCKAMAIGSRSQSARTYLERNM 176
>UniRef50_Q8SRU3 Cluster: 26S PROTEASOME ZETA CHAIN; n=4;
Microsporidia|Rep: 26S PROTEASOME ZETA CHAIN -
Encephalitozoon cuniculi
Length = 232
Score = 39.9 bits (89), Expect = 0.075
Identities = 31/120 (25%), Positives = 63/120 (52%), Gaps = 9/120 (7%)
Frame = +2
Query: 260 KLFKLSESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTM-LYY-- 430
K +K+ + VLG +G DT T+ + + + H + ++++ + + LS++ L +
Sbjct: 62 KHYKIYDHIVLGFSGISGDTKTIVKRSRDFCISHTHMYGENISVERLLKYLSSLSLRFGE 121
Query: 431 ----KRFF--PYYVSNVLAGLDSDGKGCVYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQ 592
K F P+ VS ++AG D++ + +YS DP G + +A GS ++ +L+N+
Sbjct: 122 EDEAKMIFRRPFGVSLIIAGFDTEPR--LYSLDPSGSYISYKAKAIGSGHEVVEGILENE 179
>UniRef50_Q60177 Cluster: Proteasome subunit alpha; n=29;
Archaea|Rep: Proteasome subunit alpha - Methanococcus
jannaschii
Length = 261
Score = 39.9 bits (89), Expect = 0.075
Identities = 30/148 (20%), Positives = 65/148 (43%), Gaps = 4/148 (2%)
Frame = +2
Query: 161 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLL 340
G + + IA D V+ D R+++ + R +K+F++ + +G D L
Sbjct: 35 GTTAIGIACKDGVVLAVDRRITSKL-VKIRSIEKIFQIDDHVAAATSGLVADARVLIDRA 93
Query: 341 QARMQMYEHEHNKSMTTPAVAQML----STMLYYKRFFPYYVSNVLAGLDSDGKGCVYSY 508
+ Q+Y + + ++ +A+ + + P+ VS ++AG+D + + ++
Sbjct: 94 RLEAQIYRLTYGEEISIEMLAKKICDIKQAYTQHGGVRPFGVSLLIAGIDKN-EARLFET 152
Query: 509 DPIGHCARHNFRAGGSAAAQLQPLLDNQ 592
DP G + A GS + LL+ +
Sbjct: 153 DPSGALIEYKATAIGSGRPVVMELLEKE 180
>UniRef50_Q89WM9 Cluster: ATP-dependent protease hslV; n=45;
cellular organisms|Rep: ATP-dependent protease hslV -
Bradyrhizobium japonicum
Length = 186
Score = 39.9 bits (89), Expect = 0.075
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +2
Query: 158 NGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGA-TGCWCDTLTLTR 334
+G +I+ + VIG D ++S G ++ + KK+ KL V+G G D TL
Sbjct: 12 HGTTILTVRKGGKVVIGGDGQVSIGQTVIKSNAKKVRKLGRGDVIGGFAGATADAFTLFE 71
Query: 335 LLQARMQMY 361
L+A+++ Y
Sbjct: 72 RLEAKLEQY 80
>UniRef50_Q98S31 Cluster: Proteasome subunit beta type; n=1;
Guillardia theta|Rep: Proteasome subunit beta type -
Guillardia theta (Cryptomonas phi)
Length = 236
Score = 39.5 bits (88), Expect = 0.099
Identities = 39/192 (20%), Positives = 79/192 (41%), Gaps = 1/192 (0%)
Frame = +2
Query: 161 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLL 340
G +I+ I ++ V+ ADTR + G KK+ + + + G D + L
Sbjct: 34 GTTIIGICIKNHIVLAADTRSTRGKITNDSSCKKIHFIGNNIGICGAGTSADIQNIINYL 93
Query: 341 QARMQMYEHEHNKSMTTPAVAQMLSTMLY-YKRFFPYYVSNVLAGLDSDGKGCVYSYDPI 517
+ + E K +++ L+ YK + ++ G D G +YS P
Sbjct: 94 KININFLNLEKLKETNLEECTKIIQNFLFNYKGMIS--AALIIGGFDYYGLN-LYSIYPD 150
Query: 518 GHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAERDI 697
G ++ F + GS + +L+ KN + ++ E A+ + K ++ D+
Sbjct: 151 GSMDKNFFISMGSGSFAAMTILE-----KNYNEI----MSLESAINISKQAILAGVYNDL 201
Query: 698 YTGDSIYILIIT 733
+G S+ + +I+
Sbjct: 202 GSGGSVDLYVIS 213
>UniRef50_Q98RW3 Cluster: Similar to proteasome A-type submit; n=1;
Guillardia theta|Rep: Similar to proteasome A-type
submit - Guillardia theta (Cryptomonas phi)
Length = 233
Score = 39.1 bits (87), Expect = 0.13
Identities = 27/140 (19%), Positives = 73/140 (52%), Gaps = 4/140 (2%)
Frame = +2
Query: 167 SIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLLQA 346
+++++ G++ ++ +S +I+T+ + K+F +++ +L A+G D + + ++
Sbjct: 30 TVISVKGNNL-LLTLTLDISNKKNIFTQIEPKVFIINKYIILSASGLKSDIIIVISKARS 88
Query: 347 RMQMYEHEHNKSMTTPAVAQMLSTMLY----YKRFFPYYVSNVLAGLDSDGKGCVYSYDP 514
+ ++H++ ++T ++++ LS+ L F P VS + G+D DG ++ +
Sbjct: 89 ICRDFQHKYGHQISTASLSKDLSSFLQNFTSSSGFRPLGVSLNILGIDKDGPE-LFEINT 147
Query: 515 IGHCARHNFRAGGSAAAQLQ 574
G NF + G ++ ++
Sbjct: 148 SGEINDVNFSSIGKSSKDIK 167
>UniRef50_Q7QXH1 Cluster: Proteasome subunit alpha type; n=2;
Giardia intestinalis|Rep: Proteasome subunit alpha type
- Giardia lamblia ATCC 50803
Length = 214
Score = 39.1 bits (87), Expect = 0.13
Identities = 45/176 (25%), Positives = 72/176 (40%), Gaps = 4/176 (2%)
Frame = +2
Query: 155 DNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTL-- 328
+ G S VA+ V+ + R T R +K+F + + + G D L
Sbjct: 29 ERGTSAVAVRSAAGIVLAIE-RKQTARLQDPRASQKIFDVDDHIIATFAGLTADARVLID 87
Query: 329 -TRL-LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVY 502
RL QA Y+ + + AVA +L + + P+ VS +LAG D +G V+
Sbjct: 88 RARLECQAYRMTYDVAPSVEIIAKAVASILQSHTHRGGTRPFGVSIILAGNDLNGSH-VF 146
Query: 503 SYDPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDV 670
DP G A G+ + L+ ++ QN +A + AL+ L DV
Sbjct: 147 MCDPSGVYTEWKALAIGNQCVTIIEFLEKKLKEGEPQNTNDALSLAKAALSELIDV 202
>UniRef50_Q22X00 Cluster: Proteasome A-type and B-type family
protein; n=2; Alveolata|Rep: Proteasome A-type and
B-type family protein - Tetrahymena thermophila SB210
Length = 282
Score = 39.1 bits (87), Expect = 0.13
Identities = 26/114 (22%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Frame = +2
Query: 149 YADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTL 328
+ G +IV + D V+GADTR + G + + K+ ++ + G DT +
Sbjct: 36 FTKTGTTIVGLVYKDGVVLGADTRATAGTIVAEKSCSKIHYIAPNMYCCGAGTAADTQWV 95
Query: 329 TRLLQARMQMYEHEHNK-SMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDG 487
T L + +++ N+ S A+A++ + Y+ ++ +L G D G
Sbjct: 96 TDRLSSELELMRLNTNRQSRIAGAIARLREHLYQYQGHVGAHL--ILGGFDCQG 147
>UniRef50_Q86T01 Cluster: Full-length cDNA clone CS0DK007YN03 of
HeLa cells of Homo sapiens; n=4; Eutheria|Rep:
Full-length cDNA clone CS0DK007YN03 of HeLa cells of
Homo sapiens - Homo sapiens (Human)
Length = 201
Score = 39.1 bits (87), Expect = 0.13
Identities = 21/96 (21%), Positives = 48/96 (50%)
Frame = +2
Query: 200 VIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNK 379
++ AD+R + G I ++ KK+ +++ + G D RLL + ++YE + +
Sbjct: 70 IVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKE 129
Query: 380 SMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDG 487
++ A +++L+ M+Y + + ++ G D G
Sbjct: 130 RISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRG 165
>UniRef50_Q4P0X9 Cluster: Proteasome subunit alpha type; n=3;
Fungi/Metazoa group|Rep: Proteasome subunit alpha type -
Ustilago maydis (Smut fungus)
Length = 305
Score = 37.9 bits (84), Expect = 0.30
Identities = 31/158 (19%), Positives = 67/158 (42%), Gaps = 4/158 (2%)
Frame = +2
Query: 131 QHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCW 310
++ F+ G + +A+ G D +V+ ++ I +F L+ TG
Sbjct: 23 EYAFKAINTAGLTSIAVRGKDCSVVVGQKKVPDKL-IDASSVTNIFNLTPEIGCIMTGRV 81
Query: 311 CDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTM--LYYKR--FFPYYVSNVLAGLD 478
D + + +++++ ++T +A+ ++ M +Y +R PY VS +L G+D
Sbjct: 82 ADARAQVQRAKMEAADFKYKYGYAITPDLLAKRMANMNQVYTQRAAMRPYGVSMILVGID 141
Query: 479 SDGKGCVYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQ 592
++ ++ DP G+ A G + L+ Q
Sbjct: 142 AERGPQIFKIDPAGYYVGFRATAAGVKQTEATNFLEKQ 179
>UniRef50_UPI000155FE5D Cluster: PREDICTED: similar to Proteasome
(prosome, macropain) subunit, beta type, 3; n=1; Equus
caballus|Rep: PREDICTED: similar to Proteasome (prosome,
macropain) subunit, beta type, 3 - Equus caballus
Length = 168
Score = 37.5 bits (83), Expect = 0.40
Identities = 20/78 (25%), Positives = 38/78 (48%)
Frame = +2
Query: 245 TRDQKKLFKLSESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTML 424
T D +K+F + E + TG + T + L+ ++ + E + + +++ +L
Sbjct: 3 TTDLQKIFPMGEWLDISLTGLATNFQTTAQHLKFQLNLCELNEGSQIKPYTLMSVMANLL 62
Query: 425 YYKRFFPYYVSNVLAGLD 478
Y K+F P Y V+A LD
Sbjct: 63 YKKQFGPCYTEPVIAWLD 80
>UniRef50_UPI000155BA31 Cluster: PREDICTED: similar to proteasome
subunit RC10-II; n=2; Mammalia|Rep: PREDICTED: similar
to proteasome subunit RC10-II - Ornithorhynchus anatinus
Length = 181
Score = 37.5 bits (83), Expect = 0.40
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +2
Query: 158 NGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTL 328
NGG+++A+ G + I AD R + T D +K+F + + +G G D T+
Sbjct: 31 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTV 87
>UniRef50_Q5CTQ7 Cluster: Proteasome subunit alpha type; n=3;
Cryptosporidium|Rep: Proteasome subunit alpha type -
Cryptosporidium parvum Iowa II
Length = 288
Score = 36.7 bits (81), Expect = 0.70
Identities = 44/210 (20%), Positives = 87/210 (41%), Gaps = 6/210 (2%)
Frame = +2
Query: 161 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLL 340
G ++V D+ V+ R ++ + Y QKKL+K+ + +G D + L
Sbjct: 61 GTAVVGARNDEIVVLACIKRSTSRLAGY---QKKLYKIDNHIGVAVSGITADAKVICNYL 117
Query: 341 QARMQMYEHEH------NKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVY 502
++ Y + N + + ++T Y +R P+ V +LAG D G ++
Sbjct: 118 RSECLNYSFTYDSPIPLNTLVNRLVLKSQVNTQEYGRR--PFGVGLLLAGFDESGPH-LF 174
Query: 503 SYDPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISA 682
P G+C + A GS + + L+ K N ++ L AL + +
Sbjct: 175 ETCPSGNCFEYYSIAIGSRSQASKTYLEKH--FKEFANCSKDQLILHTLRALRSSL---S 229
Query: 683 AERDIYTGDSIYILIITAHGIQEEKFELRK 772
+E+++ +++ + I+ + I E E K
Sbjct: 230 SEQEM-NQENVDVAILGRNDIYNELLEEEK 258
>UniRef50_A6SEI0 Cluster: Proteasome subunit beta type; n=1;
Botryotinia fuckeliana B05.10|Rep: Proteasome subunit
beta type - Botryotinia fuckeliana B05.10
Length = 184
Score = 36.7 bits (81), Expect = 0.70
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = +2
Query: 170 IVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLLQAR 349
++ I G D+ +I A G +I K L++ T++ +G DT+ +QA
Sbjct: 13 LLGITGKDFTIIAASKAAMRGATILKASDDKTRALNQHTLMAFSGEAGDTIQFAEYIQAN 72
Query: 350 MQMYEHEHN 376
Q+Y +N
Sbjct: 73 AQLYSMRNN 81
>UniRef50_Q27575 Cluster: Proteasome subunit alpha type-7-1B; n=16;
Drosophila|Rep: Proteasome subunit alpha type-7-1B -
Drosophila melanogaster (Fruit fly)
Length = 252
Score = 36.7 bits (81), Expect = 0.70
Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 4/124 (3%)
Frame = +2
Query: 161 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLL 340
G +++ + ++ VIG + R S G R +K+ L + V+ +G D L
Sbjct: 31 GSTVMGLRTNNAIVIGVEKR-SVGDLQEERMVRKICMLDDHVVMTFSGLTADARILVSRA 89
Query: 341 QARMQMYEHEHNKSMT----TPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSY 508
Q Q + K T T +AQ+ P+ +S ++ G D DG ++
Sbjct: 90 QMEAQSHRLNFEKPTTVEYITRYIAQLKQNYTQSNGRRPFGLSCLVGGFDEDGTPHLFQT 149
Query: 509 DPIG 520
DP G
Sbjct: 150 DPSG 153
>UniRef50_UPI0000DB76B0 Cluster: PREDICTED: similar to proteasome
(prosome, macropain) subunit, beta type, 6; n=1; Apis
mellifera|Rep: PREDICTED: similar to proteasome
(prosome, macropain) subunit, beta type, 6 - Apis
mellifera
Length = 209
Score = 36.3 bits (80), Expect = 0.93
Identities = 27/98 (27%), Positives = 46/98 (46%)
Frame = +2
Query: 461 VLAGLDSDGKGCVYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTR 640
++AG DS G VYS G C R GGS + + +D+Q + +++
Sbjct: 108 LVAGWDSRKGGQVYSVPIGGMCVRQPISIGGSGSTYVYGYMDSQY---------KPNMSK 158
Query: 641 EKALALLKDVFISAAERDIYTGDSIYILIITAHGIQEE 754
+ + L+++ A RD +G I I +IT GI+ +
Sbjct: 159 NECVKLVENTLALAMSRDGSSGGVIRIGVITNKGIERK 196
>UniRef50_Q8I6Y3 Cluster: Proteasome subunit beta type; n=8;
Trypanosomatidae|Rep: Proteasome subunit beta type -
Leishmania major
Length = 220
Score = 35.9 bits (79), Expect = 1.2
Identities = 48/207 (23%), Positives = 86/207 (41%), Gaps = 4/207 (1%)
Frame = +2
Query: 158 NGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRL 337
+G S++AI + ++ ADT LS G + ++ L + + ATG + D + +
Sbjct: 3 SGASVIAIKYNGGVLMAADTLLSYGSLAKWPNIPRIKLLGSHSAVCATGSYADFQMMAKQ 62
Query: 338 LQARMQMYEHEHNKSMTTPA-VAQMLSTMLYYKR--FFPYYVSNVLAGLDSDGKGCVYSY 508
++ ++ +N P+ V L +Y KR F P V G+ D + + +
Sbjct: 63 VEDNIERQRMYYNVDELNPSEVFSYLHRSIYQKRCDFEPCLCQMVFIGV-RDSETFLAAV 121
Query: 509 DPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLTREKALALLKDVFISAAE 688
D +G + A G A PLL Q KN L+R +A+ +L D
Sbjct: 122 DDVGTRWEDDCVATGYGAYIALPLL-RQALEKN-----PGGLSRAQAVQILTDCLRVLFY 175
Query: 689 RDIYTGDSIYILIITAHGIQ-EEKFEL 766
R+ T + + G++ E F++
Sbjct: 176 RECRTINKFQMADAAGDGVRISEPFDV 202
>UniRef50_A0RWA6 Cluster: 20S proteasome, alpha and beta subunit;
n=4; Thermoprotei|Rep: 20S proteasome, alpha and beta
subunit - Cenarchaeum symbiosum
Length = 245
Score = 35.5 bits (78), Expect = 1.6
Identities = 20/92 (21%), Positives = 39/92 (42%)
Frame = +2
Query: 341 QARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIG 520
Q+ MY+ +A Y P+ V+ ++ G+D GKG ++ DP G
Sbjct: 96 QSNRMMYDESVEVEAVAKHLADQCQQFTQYAGVRPFGVALIIGGVDDGGKGQLFLTDPSG 155
Query: 521 HCARHNFRAGGSAAAQLQPLLDNQIGLKNMQN 616
++ A G+ + Q+ L+ +M++
Sbjct: 156 TYISYDAIAIGAGSEQVTEFLEKSYKPGSMED 187
>UniRef50_UPI0000E47CE3 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 229
Score = 35.1 bits (77), Expect = 2.1
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +2
Query: 200 VIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNK 379
VI D+R + G I ++ KK+ +++ + G D R+L + ++YE + +
Sbjct: 83 VIAVDSRATAGPYIASQSVKKVIEINPYLLGTMAGGAADCAFWERVLAEQCRIYELRNKE 142
Query: 380 SMTTPAVAQMLSTMLY-YK 433
++ A +++L+ MLY YK
Sbjct: 143 RISVAAASKLLANMLYNYK 161
>UniRef50_Q59PN5 Cluster: Putative uncharacterized protein; n=2;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 124
Score = 35.1 bits (77), Expect = 2.1
Identities = 39/122 (31%), Positives = 46/122 (37%), Gaps = 2/122 (1%)
Frame = -2
Query: 489 LPSLSKPANTLDT*YGKNRL*YNIVESICATAGVVIDLLCSCS--YICILACRRRVKVNV 316
L L PA T G N L YN + + A V +L S Y +L K
Sbjct: 5 LSLLLNPATMGLTNQGPNLLSYN--DELTKFANVDGSILRSSRNLYKLVLNLNNSFKEIT 62
Query: 315 SHQQPVAPNTVLSDNLNSFFWSLVYMENPVLRRVSAPITA*SSPAMATILPPLSA*GSKR 136
S PV P VLS F L+ + S+PI P MAT PPL GS
Sbjct: 63 SVANPVNPKKVLSPTSKIFSKLLLTPSDCCPNLKSSPIAIQPLPIMATAAPPLIENGSDM 122
Query: 135 CC 130
C
Sbjct: 123 MC 124
>UniRef50_Q017X9 Cluster: Alpha 2 subunit of 20S proteasome; n=6;
Eukaryota|Rep: Alpha 2 subunit of 20S proteasome -
Ostreococcus tauri
Length = 270
Score = 34.7 bits (76), Expect = 2.8
Identities = 28/124 (22%), Positives = 54/124 (43%), Gaps = 4/124 (3%)
Frame = +2
Query: 161 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLL 340
G + + I D V+ + +L + + KK+ L++ + +G D LTR+
Sbjct: 67 GATSLGIKAVDGVVLATEKKLPSTL-VDASTVKKIATLTDDIGIAYSGMGPDFRVLTRMA 125
Query: 341 QARMQMYEHEHNKSMTTPAVAQMLSTML----YYKRFFPYYVSNVLAGLDSDGKGCVYSY 508
+ Q Y + +S+ + + +T++ P+ VS ++AG D G +Y
Sbjct: 126 RKETQTYYRTYKESIPVSQLVRETATVMQEFTQQGGVRPFGVSLLMAGYDESGPS-LYQV 184
Query: 509 DPIG 520
DP G
Sbjct: 185 DPSG 188
>UniRef50_A5B031 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 108
Score = 34.7 bits (76), Expect = 2.8
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +2
Query: 128 KQHRFEPYADNGGSIVAIAGDDYAVIGAD 214
+Q + Y +NGGS VAIAG DY VI A+
Sbjct: 38 QQANWSSYNNNGGSCVAIAGADYCVITAE 66
>UniRef50_Q8MSZ2 Cluster: GM14375p; n=3; Drosophila melanogaster|Rep:
GM14375p - Drosophila melanogaster (Fruit fly)
Length = 1162
Score = 34.7 bits (76), Expect = 2.8
Identities = 28/95 (29%), Positives = 40/95 (42%), Gaps = 2/95 (2%)
Frame = +2
Query: 446 YYVSNVLAGLDSDGKGCVYSYDPI--GHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNV 619
+ V + AG+ GK + H R + +AGG ++ QL L GLK
Sbjct: 722 FNVLEINAGMKRTGKKLIQELQEATQSHQIRKDGKAGGGSSQQLLQKLQKS-GLKAKAAA 780
Query: 620 TEAPLTREKALALLKDVFISAAERDIYTGDSIYIL 724
E P K+L L++D I D D+IY L
Sbjct: 781 VEPPSEVRKSLILIEDADILFDNLDAGFTDAIYTL 815
>UniRef50_Q7QUP6 Cluster: GLP_47_22543_21776; n=2; Giardia
intestinalis|Rep: GLP_47_22543_21776 - Giardia lamblia
ATCC 50803
Length = 255
Score = 34.3 bits (75), Expect = 3.7
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Frame = +2
Query: 161 GGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLL 340
G V +A D V+ A R +T S + Q KLF++ + + +G + D + RLL
Sbjct: 29 GSPSVGLASKDAVVLVAVRRQTTPLSSF---QDKLFEVDKHIGICISGIYADAYKMLRLL 85
Query: 341 QARMQMYEHEHNKSMTT-PAVAQMLSTMLYYKRFF---PYYVSNVLAGLDS 481
+ Y + ++ P VA++ +F+ PY S ++ G+D+
Sbjct: 86 RDECTEYTYVYDTPHPVGPLVAKLAEDAQARTQFWGYRPYGASLLIGGIDT 136
>UniRef50_A0CDQ2 Cluster: Chromosome undetermined scaffold_17, whole
genome shotgun sequence; n=3; Eukaryota|Rep: Chromosome
undetermined scaffold_17, whole genome shotgun sequence
- Paramecium tetraurelia
Length = 245
Score = 34.3 bits (75), Expect = 3.7
Identities = 34/169 (20%), Positives = 63/169 (37%), Gaps = 4/169 (2%)
Frame = +2
Query: 131 QHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCW 310
++ F+ +G + + + G D + + R+ I + LF +SE TG
Sbjct: 25 EYAFKAVKTSGLTSIGVKGTDTVCLITEKRVPDKL-IDEKSVTNLFNVSEKIGALTTGIP 83
Query: 311 CDTLTLTRLLQARMQMYEHEHNK----SMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLD 478
D L ++ + ++ + + +A + T Y + Y V +L D
Sbjct: 84 SDARALVTRMRYEAGEFRLKNGYYCPVDVLSKRMADLAQTNTQYYQMRSYGVETILCQYD 143
Query: 479 SDGKGCVYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTE 625
+ +Y DP GH + + A G + L+ QI K N E
Sbjct: 144 DELGPLLYKLDPSGHYSGYKATASGVKEQEAINYLEKQIKKKADLNYDE 192
>UniRef50_Q60KD2 Cluster: Putative uncharacterized protein CBG24113;
n=2; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG24113 - Caenorhabditis
briggsae
Length = 388
Score = 33.9 bits (74), Expect = 4.9
Identities = 16/55 (29%), Positives = 36/55 (65%)
Frame = -1
Query: 244 IYGKSSAETSVCSDNGIIIAGDGYNTTSVVRVGLETMLFRTRHSIFRKVLVNAQH 80
+YG+S+ + S GI++ D Y+T+ VVR E ++ +++ ++ +K+L++ Q+
Sbjct: 283 LYGESAIDDSTIE--GILLVADMYDTSIVVRKCEEFLMEKSKKNLKKKLLLSTQY 335
>UniRef50_Q4UHS5 Cluster: Putative uncharacterized protein; n=2;
Theileria|Rep: Putative uncharacterized protein -
Theileria annulata
Length = 204
Score = 33.9 bits (74), Expect = 4.9
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +2
Query: 350 MQMYEHE--HNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGC 496
++ Y HE KS T P+ S + ++ P Y+SN++A +SD KGC
Sbjct: 40 IKFYNHETKERKSKTKPSF-NFGSLNIRFQTKLPEYLSNIIAYAESDNKGC 89
>UniRef50_A5UNB7 Cluster: Putative uncharacterized protein; n=1;
Methanobrevibacter smithii ATCC 35061|Rep: Putative
uncharacterized protein - Methanobrevibacter smithii
(strain PS / ATCC 35061 / DSM 861)
Length = 161
Score = 33.5 bits (73), Expect = 6.5
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = -1
Query: 733 SDDENVDGVSGINVTFCSTDEHILQKSKGLFPSQRSFCYILHIL 602
S D NVD V+ N T ST E +++++ LF + F YI+ L
Sbjct: 103 SGDMNVDEVNNSNTTDNSTAEEVVEETNPLFSTSNIFIYIVVFL 146
>UniRef50_A3V8G4 Cluster: Putative glycosyltransferase; n=3;
Rhodobacterales|Rep: Putative glycosyltransferase -
Loktanella vestfoldensis SKA53
Length = 225
Score = 33.1 bits (72), Expect = 8.6
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 476 DSDGKGCVYSYDPIGHCARHNFRAGGSAAAQLQ 574
DS CVY D G+ ARHN R G S AQ++
Sbjct: 147 DSYDHACVYLRDIAGYGARHNVRPGVSGLAQVE 179
>UniRef50_P60900 Cluster: Proteasome subunit alpha type-6; n=69;
Eukaryota|Rep: Proteasome subunit alpha type-6 - Homo
sapiens (Human)
Length = 246
Score = 33.1 bits (72), Expect = 8.6
Identities = 35/164 (21%), Positives = 64/164 (39%), Gaps = 6/164 (3%)
Frame = +2
Query: 131 QHRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCW 310
++ F+ G + VA+ G D AVI ++ + + LFK++E+ TG
Sbjct: 26 EYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKL-LDSSTVTHLFKITENIGCVMTGMT 84
Query: 311 CDTLTLTRLLQARMQM------YEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAG 472
D+ + ++ +AR + Y +E M +A + P +L G
Sbjct: 85 ADSRS--QVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCMILIG 142
Query: 473 LDSDGKGCVYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQIGLK 604
+D + VY DP G+ A G + L+ ++ K
Sbjct: 143 IDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKK 186
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 810,248,735
Number of Sequences: 1657284
Number of extensions: 16703361
Number of successful extensions: 47723
Number of sequences better than 10.0: 156
Number of HSP's better than 10.0 without gapping: 45633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47656
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 70914189703
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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