Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_K24
(705 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z36753-9|CAA85337.1| 445|Caenorhabditis elegans Hypothetical pr... 161 3e-40
U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr... 34 0.11
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ... 32 0.46
Z83125-1|CAB05620.2| 420|Caenorhabditis elegans Hypothetical pr... 31 0.80
AY037795-1|AAK94760.1| 420|Caenorhabditis elegans GLY-16 protein. 31 0.80
Z71262-10|CAA95816.4| 436|Caenorhabditis elegans Hypothetical p... 30 1.4
Z71262-9|CAA95817.2| 440|Caenorhabditis elegans Hypothetical pr... 30 1.4
AY037801-1|AAK94766.1| 436|Caenorhabditis elegans GLY-19 protein. 30 1.4
AY037799-1|AAK94764.1| 352|Caenorhabditis elegans GLY-19 protein. 30 1.4
AY037797-1|AAK94762.1| 412|Caenorhabditis elegans GLY-18 protein. 30 1.4
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 30 1.4
U53344-5|AAA96226.2| 442|Caenorhabditis elegans More of ms prot... 29 3.2
AF013489-1|AAC47728.1| 442|Caenorhabditis elegans MOM-1 protein. 29 3.2
AC024201-2|AAK82924.1| 556|Caenorhabditis elegans Abnormal cell... 29 4.3
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z66495-6|CAA91275.2| 547|Caenorhabditis elegans Hypothetical pr... 27 9.9
U21321-6|AAG00046.1| 206|Caenorhabditis elegans Hypothetical pr... 27 9.9
>Z36753-9|CAA85337.1| 445|Caenorhabditis elegans Hypothetical
protein T09A5.11 protein.
Length = 445
Score = 161 bits (392), Expect = 3e-40
Identities = 84/193 (43%), Positives = 112/193 (58%), Gaps = 2/193 (1%)
Frame = +2
Query: 128 LVLIDNLNIKETHSQFFKSLQERGYGLTFKLADDANLVLSKYGEYLYKNLIVFAPSVLEF 307
LVL + +K+THS F S++ERG+ LT + ADD+ L L K+G+ ++ +L + AP V F
Sbjct: 24 LVLGETAAVKDTHSVFLNSVKERGHELTVRAADDSQLALFKHGQLIFDHLFILAPGVQVF 83
Query: 308 GGQVDSEAITKFIDDXXXXXXXXXXXXXDVYREIASECGFEMDEESAAVIDHFNYDVT-D 484
GG + I+KF+D D REIA+E GFE +E +VIDH NYD T D
Sbjct: 84 GGSLSPSEISKFVDAGGNVLVAAGSNIGDALREIAAEHGFEFEEAGTSVIDHHNYDQTLD 143
Query: 485 EGDHTRIVVSPKNLIKAPTIVGEQ-NTQPLLFEGTGLIVDKDNSLVLPILSADSTAYSYN 661
GDHT +VV LI A IVG P+LF+G GL+ K N+L L I+ A TAYSY+
Sbjct: 144 SGDHTTLVVGKDQLISAELIVGNSAKLHPVLFKGIGLVAGKTNNLALSIVRASGTAYSYD 203
Query: 662 PKSQVKEYPHAXG 700
PK+ P G
Sbjct: 204 PKAVRATNPSIAG 216
>U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical
protein F40H6.5 protein.
Length = 1288
Score = 33.9 bits (74), Expect = 0.11
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = -1
Query: 489 PSSVTS*LKWSMTAADSSSISNPHSEAISLYTSPAAALPAIRRFP-PSSMNLVMASLSTC 313
PS S SMT S S ++ S +S +PA + P I + PSS N S++T
Sbjct: 486 PSYAFSTTTSSMTTTASDSTTSDSSVIVSSSKNPAVSNPFITTYSLPSSPNNPFISITTT 545
Query: 312 PPNSSTEGANT 280
P ++S++ +T
Sbjct: 546 PDSASSQKIST 556
>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
protein Y51B11A.1 protein.
Length = 1079
Score = 31.9 bits (69), Expect = 0.46
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = -1
Query: 489 PSSVTS*LKWSMTAA-DSSSISNPHSEAISLYTSPAAALPAIRRFPPSSMNL-VMASLST 316
PSS TS ++ + T A +++S P S + T+ A PPSS V + +T
Sbjct: 181 PSSSTSPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTT 240
Query: 315 CPPNSSTEGANT 280
P +STE ++
Sbjct: 241 APETTSTESPSS 252
Score = 31.9 bits (69), Expect = 0.46
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = -1
Query: 492 SPSSVTS*LKWSMTAA-DSSSISNPHSEAISLYTSPAAALPAIRRFPPSSMNL-VMASLS 319
SPSS T+ ++ + T A +++S P S + T+ A PPSS V + +
Sbjct: 525 SPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTT 584
Query: 318 TCPPNSSTE 292
T P +STE
Sbjct: 585 TAPETTSTE 593
Score = 31.5 bits (68), Expect = 0.61
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = -1
Query: 489 PSSVTS*LKWSMTAA-DSSSISNPHSEAISLYTSPAAALPAIRRFPPSSMNL-VMASLST 316
PSS T+ ++ + T A +++S +P S + T+ A PPSS V + +T
Sbjct: 227 PSSSTTPVQTTTTTAPETTSTESPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTT 286
Query: 315 CPPNSSTE 292
P +STE
Sbjct: 287 APETTSTE 294
Score = 31.5 bits (68), Expect = 0.61
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = -1
Query: 489 PSSVTS*LKWSMTAA-DSSSISNPHSEAISLYTSPAAALPAIRRFPPSSMNL-VMASLST 316
PSS T+ ++ + T A +++S +P S + T+ A PPSS V + +T
Sbjct: 503 PSSSTTPVQTTTTTAPETTSTESPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTT 562
Query: 315 CPPNSSTE 292
P +STE
Sbjct: 563 APETTSTE 570
Score = 31.1 bits (67), Expect = 0.80
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = -1
Query: 489 PSSVTS*LKWSMTAA-DSSSISNPHSEAISLYTSPAAALPAIRRFPPSSMNL-VMASLST 316
PSS TS ++ + T A +++S P S + T+ A PPSS V + +T
Sbjct: 135 PSSSTSPVQTTTTTAPETTSTEAPSSSTTPVQTTTTTAPETTSTEPPSSSTSPVQTTTTT 194
Query: 315 CPPNSSTE 292
P +STE
Sbjct: 195 APETTSTE 202
Score = 31.1 bits (67), Expect = 0.80
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = -1
Query: 489 PSSVTS*LKWSMTAA-DSSSISNPHSEAISLYTSPAAALPAIRRFPPSSMNL-VMASLST 316
PSS TS ++ + T A +++S P S + T+ A PPSS V + +T
Sbjct: 710 PSSSTSPVQTTTTTAPETTSTEPPSSSTTPVQTTTITAPETTSTEPPSSSTTPVQTTTTT 769
Query: 315 CPPNSSTE 292
P +STE
Sbjct: 770 APETTSTE 777
Score = 31.1 bits (67), Expect = 0.80
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = -1
Query: 489 PSSVTS*LKWSMTAA-DSSSISNPHSEAISLYTSPAAALPAIRRFPPSSMNL-VMASLST 316
PSS TS ++ + T A +++S P S + T+ A PPSS V + +T
Sbjct: 848 PSSSTSPVQTTTTTAPETTSTEPPSSSTTPVQTTTITAPETTSTEPPSSSTTPVQTTTTT 907
Query: 315 CPPNSSTE 292
P +STE
Sbjct: 908 APETTSTE 915
Score = 30.7 bits (66), Expect = 1.1
Identities = 29/114 (25%), Positives = 45/114 (39%), Gaps = 1/114 (0%)
Frame = -1
Query: 618 TKLLSLSTISPVPSNSRGCVFCSPTIVGALIRFLGDTTMRVWSPSSVTS*LKWSMTAADS 439
T + +TI+ + S S T V +TT SS T + TA ++
Sbjct: 415 TTPVQTTTITAPETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPET 474
Query: 438 SSISNPHSEAISLYTSPAAALPAIRRFPPSSMNL-VMASLSTCPPNSSTEGANT 280
+S P S + T+ A PPSS V + +T P +STE ++
Sbjct: 475 TSTEPPSSSTTPVQTTTITAPETTSTEPPSSSTTPVQTTTTTAPETTSTESPSS 528
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = -1
Query: 489 PSSVTS*LKWS-MTAADSSSISNPHSEAISLYTSPAAALPAIRRFPPSSMNL-VMASLST 316
PSS TS ++ + +TA +++S P S + T+ A PPSS V + +T
Sbjct: 802 PSSSTSPVQTTTITAPETTSTEPPSSSNTPVQTTTTTAPETTSTEPPSSSTSPVQTTTTT 861
Query: 315 CPPNSSTE 292
P +STE
Sbjct: 862 APETTSTE 869
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = -1
Query: 489 PSSVTS*LKWSMTAA-DSSSISNPHSEAISLYTSPAAALPAIRRFPPSSMNL-VMASLST 316
PSS T+ ++ + T A +++S P S + T+ A PPSS V + +T
Sbjct: 89 PSSSTTPVQTTTTTAPETTSTEAPSSSTTPVQTTTTTAPETTSTEPPSSSTSPVQTTTTT 148
Query: 315 CPPNSSTEGANT 280
P +STE ++
Sbjct: 149 APETTSTEAPSS 160
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = -1
Query: 489 PSSVTS*LKWSMTAA-DSSSISNPHSEAISLYTSPAAALPAIRRFPPSSMNL-VMASLST 316
PSS T+ ++ + T A +++S P S + T+ A PPSS V + +T
Sbjct: 549 PSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTT 608
Query: 315 CPPNSSTE 292
P +STE
Sbjct: 609 APETTSTE 616
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = -1
Query: 489 PSSVTS*LKWSMTAA-DSSSISNPHSEAISLYTSPAAALPAIRRFPPSSMNL-VMASLST 316
PSS T+ ++ + T A +++S P S + T+ A PPSS V + +T
Sbjct: 572 PSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTT 631
Query: 315 CPPNSSTE 292
P +STE
Sbjct: 632 APETTSTE 639
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = -1
Query: 489 PSSVTS*LKWSMTAA-DSSSISNPHSEAISLYTSPAAALPAIRRFPPSSMNL-VMASLST 316
PSS T+ ++ + T A +++S P S + T+ A PPSS V + +T
Sbjct: 595 PSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTT 654
Query: 315 CPPNSSTE 292
P +STE
Sbjct: 655 APETTSTE 662
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = -1
Query: 489 PSSVTS*LKWSMTAA-DSSSISNPHSEAISLYTSPAAALPAIRRFPPSSMNL-VMASLST 316
PSS T+ ++ + T A +++S P S + T+ A PPSS V + +T
Sbjct: 273 PSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTITAPETTSTEPPSSSTTPVQTTTTT 332
Query: 315 CPPNSSTE 292
P +STE
Sbjct: 333 APETTSTE 340
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = -1
Query: 489 PSSVTS*LKWSMTAA-DSSSISNPHSEAISLYTSPAAALPAIRRFPPSSMNL-VMASLST 316
PSS T+ ++ + T A +++S P S + T+ A PPSS V + +T
Sbjct: 664 PSSSTTPVQTTTTTAPETTSTEPPSSSNTPVQTTTTTAPETTSTEPPSSSTSPVQTTTTT 723
Query: 315 CPPNSSTE 292
P +STE
Sbjct: 724 APETTSTE 731
Score = 27.9 bits (59), Expect = 7.5
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = -1
Query: 513 DTTMRVWSPSSVTS*LKWSMTAADSSSISNPHSEAISLYTSPAAALPAIRRFPPSSMNL- 337
+TT SS T ++TA +++S P S + T+ A PSS
Sbjct: 473 ETTSTEPPSSSTTPVQTTTITAPETTSTEPPSSSTTPVQTTTTTAPETTSTESPSSSTTP 532
Query: 336 VMASLSTCPPNSSTE 292
V + +T P +STE
Sbjct: 533 VQTTTTTAPETTSTE 547
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = -1
Query: 489 PSSVTS*LKWSMTAADSSSISNPHSEAISLYTSPAAALPAIR--RFPPSSMNLVMASLST 316
PSS T+ ++ + T A ++ + P S + + + P P SS V + +T
Sbjct: 204 PSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETTSTESPSSSTTPVQTTTTT 263
Query: 315 CPPNSSTE 292
P +STE
Sbjct: 264 APETTSTE 271
>Z83125-1|CAB05620.2| 420|Caenorhabditis elegans Hypothetical
protein T15D6.2 protein.
Length = 420
Score = 31.1 bits (67), Expect = 0.80
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = -3
Query: 481 SHIIVEVVYDCCRFLVHLKSTF*SDFSIYVSG 386
S+ I+ VYDC +FL HLKS + + Y+SG
Sbjct: 164 SYEIINSVYDCLKFLSHLKSNW--KYFQYLSG 193
>AY037795-1|AAK94760.1| 420|Caenorhabditis elegans GLY-16 protein.
Length = 420
Score = 31.1 bits (67), Expect = 0.80
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = -3
Query: 481 SHIIVEVVYDCCRFLVHLKSTF*SDFSIYVSG 386
S+ I+ VYDC +FL HLKS + + Y+SG
Sbjct: 164 SYEIINSVYDCLKFLSHLKSNW--KYFQYLSG 193
>Z71262-10|CAA95816.4| 436|Caenorhabditis elegans Hypothetical
protein F22D6.12 protein.
Length = 436
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = -3
Query: 493 VSLISHIIVEVVYDCCRFLVHLKSTF*SDFSIYVSG 386
+S SH I++ VYDC FL HL++ + + Y+SG
Sbjct: 177 ISWGSHEIIDSVYDCLEFLSHLETDW--RYFQYLSG 210
>Z71262-9|CAA95817.2| 440|Caenorhabditis elegans Hypothetical
protein F22D6.11 protein.
Length = 440
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -3
Query: 481 SHIIVEVVYDCCRFLVHLKSTF*SDFSIYVSG 386
SH I+ YDC FL HLKS + + Y+SG
Sbjct: 184 SHEIINSAYDCLEFLSHLKSDW--RYFQYLSG 213
>AY037801-1|AAK94766.1| 436|Caenorhabditis elegans GLY-19 protein.
Length = 436
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = -3
Query: 493 VSLISHIIVEVVYDCCRFLVHLKSTF*SDFSIYVSG 386
+S SH I++ VYDC FL HL++ + + Y+SG
Sbjct: 177 ISWGSHEIIDSVYDCLEFLSHLETDW--RYFQYLSG 210
>AY037799-1|AAK94764.1| 352|Caenorhabditis elegans GLY-19 protein.
Length = 352
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = -3
Query: 493 VSLISHIIVEVVYDCCRFLVHLKSTF*SDFSIYVSG 386
+S SH I++ VYDC FL HL++ + + Y+SG
Sbjct: 93 ISWGSHEIIDSVYDCLEFLSHLETDW--RYFQYLSG 126
>AY037797-1|AAK94762.1| 412|Caenorhabditis elegans GLY-18 protein.
Length = 412
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -3
Query: 481 SHIIVEVVYDCCRFLVHLKSTF*SDFSIYVSG 386
SH I+ YDC FL HLKS + + Y+SG
Sbjct: 156 SHEIINSAYDCLEFLSHLKSDW--RYFQYLSG 185
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = -1
Query: 453 TAADSSSISNPHSEAISLYTSPAAALPAIRRFPPSSMNLVMASLSTCPPNSSTEGANT 280
T SS + S A + T+ + + P S +L M+SLST P+SST GA +
Sbjct: 424 TTGGSSPSTAGTSLASTAVTTETSIGSSSTPLPSQSTSLSMSSLSTYTPSSSTAGATS 481
>U53344-5|AAA96226.2| 442|Caenorhabditis elegans More of ms protein
1 protein.
Length = 442
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 178 QIITRTRLWLNFQTCG*CKSCPVKIRRIFIQESHSIRTFRARV 306
+ + R RL + C K+CPV+ + + HS +T RA +
Sbjct: 341 ETVFRKRLSARYSMCVAAKACPVRSNSLSCKHRHSNKTGRALI 383
>AF013489-1|AAC47728.1| 442|Caenorhabditis elegans MOM-1 protein.
Length = 442
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 178 QIITRTRLWLNFQTCG*CKSCPVKIRRIFIQESHSIRTFRARV 306
+ + R RL + C K+CPV+ + + HS +T RA +
Sbjct: 341 ETVFRKRLSARYSMCVAAKACPVRSNSLSCKHRHSNKTGRALI 383
>AC024201-2|AAK82924.1| 556|Caenorhabditis elegans Abnormal cell
lineage protein 17,isoform b protein.
Length = 556
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 202 WLNFQTCG*CKSCPVKIR 255
W NF CG C S PVK++
Sbjct: 502 WKNFIFCGMCSSAPVKVK 519
>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 28.3 bits (60), Expect = 5.7
Identities = 25/105 (23%), Positives = 41/105 (39%), Gaps = 1/105 (0%)
Frame = -1
Query: 540 VGALIRFLGDTTMRVWSPSSVTS*LKWSMTAADSSSISNPHSEAI-SLYTSPAAALPAIR 364
+G+ T+ S SS L+ A +S ++ + + S YT AAA
Sbjct: 2324 IGSASGLSSQATIIASSSSSANESLQSRQAATSVTSANSGRTRGVRSYYTEEAAARARAF 2383
Query: 363 RFPPSSMNLVMASLSTCPPNSSTEGANTMRFLYKYSPYFDRTRFA 229
PP +L + +T ++ MR +K Y R+R A
Sbjct: 2384 GIPPEMASLSLRMETTQNAQTAFSAYQKMRREWKDRVYLARSRIA 2428
>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 28.3 bits (60), Expect = 5.7
Identities = 25/105 (23%), Positives = 41/105 (39%), Gaps = 1/105 (0%)
Frame = -1
Query: 540 VGALIRFLGDTTMRVWSPSSVTS*LKWSMTAADSSSISNPHSEAI-SLYTSPAAALPAIR 364
+G+ T+ S SS L+ A +S ++ + + S YT AAA
Sbjct: 2324 IGSASGLSSQATIIASSSSSANESLQSRQAATSVTSANSGRTRGVRSYYTEEAAARARAF 2383
Query: 363 RFPPSSMNLVMASLSTCPPNSSTEGANTMRFLYKYSPYFDRTRFA 229
PP +L + +T ++ MR +K Y R+R A
Sbjct: 2384 GIPPEMASLSLRMETTQNAQTAFSAYQKMRREWKDRVYLARSRIA 2428
>Z66495-6|CAA91275.2| 547|Caenorhabditis elegans Hypothetical
protein C36A4.8 protein.
Length = 547
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -1
Query: 378 LPAIRRFPPSSMNLVMASLSTCPPNSSTEGANTMRFLYKYSPYFDRTR-FASSASLKVKP 202
+P +R+F +++N +M PP S + AN R + S + + +S SL+ P
Sbjct: 231 MPTMRQFLRNNINQLMEKFHVAPPKKSEKPAN-RRVSFASSQDLENIKIMTASESLETPP 289
Query: 201 *P 196
P
Sbjct: 290 EP 291
>U21321-6|AAG00046.1| 206|Caenorhabditis elegans Hypothetical
protein ZK177.3 protein.
Length = 206
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -1
Query: 375 PAIRRFPPSSMNLVMASLSTCPPNSSTEGANTMRFLYKYSPYFDRTRFAS 226
PA+ +S +L M S CPP + + + + Y +PY D T F S
Sbjct: 130 PAVFEKDFASYDLPM--FSQCPPMNGIPVSTPIEYPYSQNPYQDHTPFDS 177
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,464,590
Number of Sequences: 27780
Number of extensions: 316203
Number of successful extensions: 923
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 914
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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