Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_K22
         (819 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0471 - 3672309-3672740,3673159-3673251,3673271-3673399,367...    32   0.63 
06_01_0730 + 5370575-5370761,5371395-5371438,5372057-5372204,537...    29   4.4  
05_03_0142 - 8866316-8866608,8867652-8867886,8868801-8869076,886...    29   4.4  
02_05_1041 - 33713561-33714564,33714844-33714904,33715640-337159...    28   7.8  
01_07_0375 - 43152161-43152262,43152556-43152664,43153433-431535...    28   7.8  

>12_01_0471 -
           3672309-3672740,3673159-3673251,3673271-3673399,
           3673400-3673448,3674291-3674378,3674477-3674573,
           3675195-3675278,3675377-3675464,3676589-3676715,
           3676774-3676848,3676934-3677042,3677125-3677448,
           3677863-3678039
          Length = 623

 Score = 31.9 bits (69), Expect = 0.63
 Identities = 15/42 (35%), Positives = 26/42 (61%)
 Frame = +3

Query: 582 LSTSNDNDLCEVGASVARCLVKFGDGTHSWAPVSSLKLLSVP 707
           L T  ++DL +V +   R +V +G+G +SW  ++  K LS+P
Sbjct: 396 LLTGGEDDLVQVWSMDDRKIVAWGEGHNSWVQLNLPKKLSMP 437


>06_01_0730 +
           5370575-5370761,5371395-5371438,5372057-5372204,
           5372289-5372397,5373349-5373863,5374571-5374808,
           5375296-5375560,5375740-5375844,5375950-5376015,
           5376562-5377020,5377267-5377464,5378149-5378211
          Length = 798

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +3

Query: 414 HHVQVKRMKKKEEETQDAMPDSTTSTEKNN 503
           H V+ KR KK+E   Q  +PD++   E N+
Sbjct: 66  HEVKRKRDKKRESAGQKTVPDASAQAEHNS 95


>05_03_0142 -
           8866316-8866608,8867652-8867886,8868801-8869076,
           8869166-8869292,8869869-8870116,8870189-8871104,
           8871980-8872086,8872562-8872930
          Length = 856

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +3

Query: 456 TQDAMPDSTTSTEKNNANPFHCGDDVLVANKD 551
           TQD M  S T+    N N +HCG      N+D
Sbjct: 738 TQDQMKSSMTAIHNENKNLYHCGIVYAHRNED 769


>02_05_1041 -
           33713561-33714564,33714844-33714904,33715640-33715951,
           33716780-33716917
          Length = 504

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 17/67 (25%), Positives = 25/67 (37%)
 Frame = +3

Query: 399 LTKRLHHVQVKRMKKKEEETQDAMPDSTTSTEKNNANPFHCGDDVLVANKDGRYYLGTII 578
           L K++  +   +    E       P      E      F  G      +KDGR+Y G +I
Sbjct: 70  LVKQIDEIFPNQEPTSEAPEVAVDPPDDVEPEPLEPQEFSVGSKCRFRHKDGRWYNGCVI 129

Query: 579 ELSTSND 599
            L  S+D
Sbjct: 130 GLEGSSD 136


>01_07_0375 -
           43152161-43152262,43152556-43152664,43153433-43153504,
           43153690-43153834,43153930-43154085,43154557-43154618,
           43154695-43155020
          Length = 323

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 17/57 (29%), Positives = 27/57 (47%)
 Frame = -3

Query: 814 PXPHMSHAMIALVAGPVAGPSRRLHTTHMMRPSSAGGTLSSFSDDTGAHECVPSPNL 644
           P P M H  +A   G VA   R L   + +   +  GTL+   ++T  + C  +PN+
Sbjct: 116 PFPGMKHLDVAGGTGDVA--FRALERINSVSHRAMQGTLTDIEEETQIYVCDINPNM 170


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,128,998
Number of Sequences: 37544
Number of extensions: 384078
Number of successful extensions: 1138
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1137
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2244686244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)