BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_K22
(819 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L35153-1|AAA64457.1| 857|Drosophila melanogaster polycomblike n... 39 0.007
AY075585-1|AAL68389.1| 1043|Drosophila melanogaster SD09488p pro... 39 0.007
AE013599-2620|AAF57748.2| 1043|Drosophila melanogaster CG5109-PA... 39 0.007
AE013599-3815|AAF47164.2| 2291|Drosophila melanogaster CG11290-P... 31 1.9
DQ423241-1|ABD96028.1| 1573|Drosophila melanogaster Gef26 dizzy ... 30 3.3
AF434686-1|AAL28130.1| 1573|Drosophila melanogaster guanine nucl... 30 3.3
AE014134-1072|AAF52365.2| 1573|Drosophila melanogaster CG9491-PA... 30 3.3
BT001690-1|AAN71445.1| 647|Drosophila melanogaster RE58362p pro... 29 5.8
AE013599-1057|AAF58813.2| 639|Drosophila melanogaster CG18408-P... 29 5.8
DQ099897-1|AAZ42161.1| 418|Drosophila melanogaster oncogene yor... 29 7.6
AE013599-3803|ABI31113.1| 418|Drosophila melanogaster CG4005-PC... 29 7.6
>L35153-1|AAA64457.1| 857|Drosophila melanogaster polycomblike
nuclear protein protein.
Length = 857
Score = 39.1 bits (87), Expect = 0.007
Identities = 31/102 (30%), Positives = 42/102 (41%), Gaps = 4/102 (3%)
Frame = +3
Query: 525 DDVLVANKDGRYYLGTIIELSTSNDNDLCEVGASVARC----LVKFGDGTHSWAPVSSLK 692
+DV + DGR+YLGTII+ TS+ + S C L K G G+ A
Sbjct: 355 EDVFIKCNDGRFYLGTIID-QTSDQYLIRFDDQSEQWCEPDKLRKLGGGSSITAGGGGAS 413
Query: 693 LLSVPPADDGRIMCVVCKRREGPATGPATNAIIACDMCGXGY 818
MCV CKR + + + C+ CG GY
Sbjct: 414 TTESTNTSPSGPMCVACKRSD------IEDVVEICERCGRGY 449
>AY075585-1|AAL68389.1| 1043|Drosophila melanogaster SD09488p
protein.
Length = 1043
Score = 39.1 bits (87), Expect = 0.007
Identities = 31/102 (30%), Positives = 42/102 (41%), Gaps = 4/102 (3%)
Frame = +3
Query: 525 DDVLVANKDGRYYLGTIIELSTSNDNDLCEVGASVARC----LVKFGDGTHSWAPVSSLK 692
+DV + DGR+YLGTII+ TS+ + S C L K G G+ A
Sbjct: 355 EDVFIKCNDGRFYLGTIID-QTSDQYLIRFDDQSEQWCEPDKLRKLGGGSSITAGGGGAS 413
Query: 693 LLSVPPADDGRIMCVVCKRREGPATGPATNAIIACDMCGXGY 818
MCV CKR + + + C+ CG GY
Sbjct: 414 TTESTNTSPSGPMCVACKRSD------IEDVVEICERCGRGY 449
>AE013599-2620|AAF57748.2| 1043|Drosophila melanogaster CG5109-PA
protein.
Length = 1043
Score = 39.1 bits (87), Expect = 0.007
Identities = 31/102 (30%), Positives = 42/102 (41%), Gaps = 4/102 (3%)
Frame = +3
Query: 525 DDVLVANKDGRYYLGTIIELSTSNDNDLCEVGASVARC----LVKFGDGTHSWAPVSSLK 692
+DV + DGR+YLGTII+ TS+ + S C L K G G+ A
Sbjct: 355 EDVFIKCNDGRFYLGTIID-QTSDQYLIRFDDQSEQWCEPDKLRKLGGGSSITAGGGGAS 413
Query: 693 LLSVPPADDGRIMCVVCKRREGPATGPATNAIIACDMCGXGY 818
MCV CKR + + + C+ CG GY
Sbjct: 414 TTESTNTSPSGPMCVACKRSD------IEDVVEICERCGRGY 449
>AE013599-3815|AAF47164.2| 2291|Drosophila melanogaster CG11290-PA
protein.
Length = 2291
Score = 31.1 bits (67), Expect = 1.9
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +3
Query: 402 TKRLHHVQVKRMKKKEEETQDAMPDSTTSTEKNNANPFHCGDDVLVANKDGRYY 563
TK H V+ K KKEE+ + + ST + +A+ HC + AN Y
Sbjct: 1628 TKEKHKVERKNSGKKEEQNKVVSSVNVVSTAREDAHVQHCNE--YAANNQAALY 1679
>DQ423241-1|ABD96028.1| 1573|Drosophila melanogaster Gef26 dizzy AI
isoform protein.
Length = 1573
Score = 30.3 bits (65), Expect = 3.3
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = -3
Query: 766 VAGPSRRLHTTHMMRPSSAGGTLSSFSDDTGAH-ECVPSPNLTKHR 632
V P +H H S GG ++S + A+ +C PSP+ HR
Sbjct: 1300 VIPPLHHMHAAHGFSTPSPGGVVTSPATSAVANVQCTPSPSPCSHR 1345
>AF434686-1|AAL28130.1| 1573|Drosophila melanogaster guanine
nucleotide exchange factor protein.
Length = 1573
Score = 30.3 bits (65), Expect = 3.3
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = -3
Query: 766 VAGPSRRLHTTHMMRPSSAGGTLSSFSDDTGAH-ECVPSPNLTKHR 632
V P +H H S GG ++S + A+ +C PSP+ HR
Sbjct: 1300 VIPPLHHMHAAHGFSTPSPGGVVTSPATSAVANVQCTPSPSPCSHR 1345
>AE014134-1072|AAF52365.2| 1573|Drosophila melanogaster CG9491-PA
protein.
Length = 1573
Score = 30.3 bits (65), Expect = 3.3
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = -3
Query: 766 VAGPSRRLHTTHMMRPSSAGGTLSSFSDDTGAH-ECVPSPNLTKHR 632
V P +H H S GG ++S + A+ +C PSP+ HR
Sbjct: 1300 VIPPLHHMHAAHGFSTPSPGGVVTSPATSAVANVQCTPSPSPCSHR 1345
>BT001690-1|AAN71445.1| 647|Drosophila melanogaster RE58362p
protein.
Length = 647
Score = 29.5 bits (63), Expect = 5.8
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +3
Query: 672 APVSSLKLLSVPPADDGRIMCVVCKRREGP---ATGPATNAIIACDMCGXGY 818
A SSL+L VP D + + +R GP A A N++ C CG Y
Sbjct: 29 AKSSSLRLKDVPLNDAQLLQVLHAQRERGPLILALSSAKNSVQTCRKCGTPY 80
>AE013599-1057|AAF58813.2| 639|Drosophila melanogaster CG18408-PI,
isoform I protein.
Length = 639
Score = 29.5 bits (63), Expect = 5.8
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +3
Query: 672 APVSSLKLLSVPPADDGRIMCVVCKRREGP---ATGPATNAIIACDMCGXGY 818
A SSL+L VP D + + +R GP A A N++ C CG Y
Sbjct: 21 AKSSSLRLKDVPLNDAQLLQVLHAQRERGPLILALSSAKNSVQTCRKCGTPY 72
>DQ099897-1|AAZ42161.1| 418|Drosophila melanogaster oncogene yorkie
protein.
Length = 418
Score = 29.1 bits (62), Expect = 7.6
Identities = 18/65 (27%), Positives = 28/65 (43%)
Frame = +3
Query: 444 KEEETQDAMPDSTTSTEKNNANPFHCGDDVLVANKDGRYYLGTIIELSTSNDNDLCEVGA 623
K+ + +TTST NN P G + V Y++ I ++ ND + + G
Sbjct: 312 KQNDVLQTTKQTTTSTIANNLGPLPDGWEQAVTESGDLYFINHIDRTTSWNDPRM-QSGL 370
Query: 624 SVARC 638
SV C
Sbjct: 371 SVLDC 375
>AE013599-3803|ABI31113.1| 418|Drosophila melanogaster CG4005-PC,
isoform C protein.
Length = 418
Score = 29.1 bits (62), Expect = 7.6
Identities = 18/65 (27%), Positives = 28/65 (43%)
Frame = +3
Query: 444 KEEETQDAMPDSTTSTEKNNANPFHCGDDVLVANKDGRYYLGTIIELSTSNDNDLCEVGA 623
K+ + +TTST NN P G + V Y++ I ++ ND + + G
Sbjct: 312 KQNDVLQTTKQTTTSTIANNLGPLPDGWEQAVTESGDLYFINHIDRTTSWNDPRM-QSGL 370
Query: 624 SVARC 638
SV C
Sbjct: 371 SVLDC 375
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,030,820
Number of Sequences: 53049
Number of extensions: 668572
Number of successful extensions: 2035
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2035
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3860063376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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