Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_K22
         (819 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U21322-6|AAN65314.2|  669|Caenorhabditis elegans Hypothetical pr...    33   0.32 
U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical pr...    33   0.32 
Z75712-4|CAB00043.1|  694|Caenorhabditis elegans Hypothetical pr...    32   0.57 
AC024845-1|AAF60850.2|  347|Caenorhabditis elegans Hypothetical ...    30   1.7  

>U21322-6|AAN65314.2|  669|Caenorhabditis elegans Hypothetical
           protein K10D2.1b protein.
          Length = 669

 Score = 32.7 bits (71), Expect = 0.32
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = +3

Query: 441 KKEEETQDAMPDSTTSTEKNNANPFHCGDDVLVANK 548
           K+E+E+QD+   S  S+  NNA+   C +DVL+  K
Sbjct: 388 KEEDESQDSFNLSDLSSSANNASFVTCPEDVLIKRK 423


>U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical
           protein K10D2.1a protein.
          Length = 1223

 Score = 32.7 bits (71), Expect = 0.32
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = +3

Query: 441 KKEEETQDAMPDSTTSTEKNNANPFHCGDDVLVANK 548
           K+E+E+QD+   S  S+  NNA+   C +DVL+  K
Sbjct: 676 KEEDESQDSFNLSDLSSSANNASFVTCPEDVLIKRK 711


>Z75712-4|CAB00043.1|  694|Caenorhabditis elegans Hypothetical
           protein K04G2.6 protein.
          Length = 694

 Score = 31.9 bits (69), Expect = 0.57
 Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 5/57 (8%)
 Frame = +2

Query: 257 EFDLTYKY*NLIMLLPCCV*IIKTILEMDIKAEVSKQL--SLIDE--LLRD-LDKTI 412
           EF   YK   L+ML  C V I+ +I+E ++KA+   +L  +L+ E  L +D LDKTI
Sbjct: 287 EFVKLYKTDLLVMLSTCLVGILPSIVETELKADAVNRLLMALVGEAKLEQDILDKTI 343


>AC024845-1|AAF60850.2|  347|Caenorhabditis elegans Hypothetical
           protein Y65B4BL.3 protein.
          Length = 347

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = -3

Query: 781 LVAGPVAGPSRRLHTTHMMRPSSAGGTLSSFSDDTGAHECVPSPNLTKHR 632
           L AGP+   S RL   +    +   GT+SS+S   G +  + S N  + R
Sbjct: 287 LNAGPLLSDSYRLSVNNWQAANETRGTVSSYSQIRGWNNTIRSTNTMRQR 336


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,461,718
Number of Sequences: 27780
Number of extensions: 344307
Number of successful extensions: 1030
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 981
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1030
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2019417216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)