Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_K17
         (815 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    24   1.7  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    23   2.2  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    23   2.2  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   3.8  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   6.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   6.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   6.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.9  

>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 8/32 (25%), Positives = 18/32 (56%)
 Frame = +1

Query: 283 YYLQVFAKSSKMNISHYFAGIIHYFACIVVCV 378
           Y+ +  A++ ++    Y+     YF C++VC+
Sbjct: 141 YFREYLAEAVQLYFQFYYT----YFLCVIVCI 168


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -2

Query: 790 KGRLQFSSLDSS*MFSYTIHGHGCLFVS 707
           KGR  F  L S+ +++Y I G   +FV+
Sbjct: 73  KGRTTFRWLSSTSIYAYFIFGAETIFVT 100


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -2

Query: 790 KGRLQFSSLDSS*MFSYTIHGHGCLFVS 707
           KGR  F  L S+ +++Y I G   +FV+
Sbjct: 73  KGRTTFRWLSSTSIYAYFIFGAETIFVT 100


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +2

Query: 53  NT*SLLQTFLFIFVNFQCFIIILYDISLFSRL 148
           N   L    +FIFVN   ++IIL     F+R+
Sbjct: 89  NEPKLRHYLIFIFVNVFFWVIILMSNYAFTRI 120


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -3

Query: 432 NPCHFFSILTSTKQWCLSNTHNYTC 358
           NP H  S +T    W ++ +  Y C
Sbjct: 121 NPIHTSSYMTGIWVWLINISATYIC 145


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -3

Query: 432 NPCHFFSILTSTKQWCLSNTHNYTC 358
           NP H  S +T    W ++ +  Y C
Sbjct: 354 NPIHTSSYMTGIWVWLINISATYIC 378


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -3

Query: 432 NPCHFFSILTSTKQWCLSNTHNYTC 358
           NP H  S +T    W ++ +  Y C
Sbjct: 354 NPIHTSSYMTGIWVWLINISATYIC 378


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = +1

Query: 442 TTILFVPCTLIFLWCWYEQYQTNIIF 519
           T  L   C LI L C Y  Y   I+F
Sbjct: 223 TIHLLFYCVLIILLCIYYFYYAFILF 248


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,816
Number of Sequences: 336
Number of extensions: 4833
Number of successful extensions: 19
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22310335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)