SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_K17
         (815 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457312-1|CAG33593.1|  318|Homo sapiens FLJ13352 protein.             75   2e-13
BC002480-1|AAH02480.1|  318|Homo sapiens steroid 5 alpha-reducta...    75   2e-13
AK023414-1|BAB14568.1|  318|Homo sapiens protein ( Homo sapiens ...    75   2e-13
M74047-1|AAA60586.1|  254|Homo sapiens steroid 5-alpha-reductase...    44   7e-04
EF560740-1|ABQ59050.1|  254|Homo sapiens SRD5A2 protein protein.       44   7e-04
BC113641-1|AAI13642.1|  254|Homo sapiens steroid-5-alpha-reducta...    44   7e-04
BC112252-1|AAI12253.1|  254|Homo sapiens steroid-5-alpha-reducta...    44   7e-04
AY884245-1|AAW56942.1|  254|Homo sapiens steroid-5-alpha-reducta...    44   7e-04
M68886-1|AAA60995.1|  259|Homo sapiens steroid 5-alpha-reductase...    39   0.025
M32313-1|AAA35490.1|  259|Homo sapiens protein ( Human steroid 5...    39   0.025
BT006834-1|AAP35480.1|  259|Homo sapiens steroid-5-alpha-reducta...    39   0.025
BC008673-1|AAH08673.1|  259|Homo sapiens steroid-5-alpha-reducta...    39   0.025
BC007033-1|AAH07033.1|  259|Homo sapiens steroid-5-alpha-reducta...    39   0.025
AY341029-1|AAP88935.1|  259|Homo sapiens steroid-5-alpha-reducta...    39   0.025
AF113128-1|AAF14869.1|  211|Homo sapiens steroid-5-alpha-reducta...    39   0.025
AF052126-1|AAC28620.1|  259|Homo sapiens steroid 5-alpha-reducta...    39   0.025

>CR457312-1|CAG33593.1|  318|Homo sapiens FLJ13352 protein.
          Length = 318

 Score = 75.4 bits (177), Expect = 2e-13
 Identities = 45/176 (25%), Positives = 89/176 (50%), Gaps = 2/176 (1%)
 Frame = +1

Query: 274 YETYYLQVFAKSSKMNISHYFAGIIHYFACIVVCVGQAPLFCGSQNREKVTWIDTKTTIL 453
           +E  Y+ VF+ +  +++  Y  G+++Y    +  + Q P+  G         +  +    
Sbjct: 145 FECLYVSVFS-NVMIHVVQYCFGLVYYVLVGLTVLSQVPMD-GRNAYITGKNLLMQARWF 202

Query: 454 FVPCTLIFLWCWYEQYQTNIIFAYLRKDKKSNKIVTEDHRVPNGRMFKYVSSPHRMCEII 633
            +   ++F+W    QY+ ++I   LRK+K +  ++  +HR+P G  F+YVSSP+ + E++
Sbjct: 203 HILGMMMFIWSSAHQYKCHVILGNLRKNK-AGVVIHCNHRIPFGDWFEYVSSPNYLAELM 261

Query: 634 MYT--VLVFLITTKTFVCIYLWVLSNQIQTGIHAHEWYKKTFKNYPAKRTAVFPYV 795
           +Y    + F     T+  +   V  NQ  +   +H++YK  F +YP  R A  P++
Sbjct: 262 IYVSMAVTFGFHNLTWWLVVTNVFFNQALSAFLSHQFYKSKFVSYPKHRKAFLPFL 317


>BC002480-1|AAH02480.1|  318|Homo sapiens steroid 5 alpha-reductase
           2-like protein.
          Length = 318

 Score = 75.4 bits (177), Expect = 2e-13
 Identities = 45/176 (25%), Positives = 89/176 (50%), Gaps = 2/176 (1%)
 Frame = +1

Query: 274 YETYYLQVFAKSSKMNISHYFAGIIHYFACIVVCVGQAPLFCGSQNREKVTWIDTKTTIL 453
           +E  Y+ VF+ +  +++  Y  G+++Y    +  + Q P+  G         +  +    
Sbjct: 145 FECLYVSVFS-NVMIHVVQYCFGLVYYVLVGLTVLSQVPMD-GRNAYITGKNLLMQARWF 202

Query: 454 FVPCTLIFLWCWYEQYQTNIIFAYLRKDKKSNKIVTEDHRVPNGRMFKYVSSPHRMCEII 633
            +   ++F+W    QY+ ++I   LRK+K +  ++  +HR+P G  F+YVSSP+ + E++
Sbjct: 203 HILGMMMFIWSSAHQYKCHVILGNLRKNK-AGVVIHCNHRIPFGDWFEYVSSPNYLAELM 261

Query: 634 MYT--VLVFLITTKTFVCIYLWVLSNQIQTGIHAHEWYKKTFKNYPAKRTAVFPYV 795
           +Y    + F     T+  +   V  NQ  +   +H++YK  F +YP  R A  P++
Sbjct: 262 IYVSMAVTFGFHNLTWWLVVTNVFFNQALSAFLSHQFYKSKFVSYPKHRKAFLPFL 317


>AK023414-1|BAB14568.1|  318|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13352 fis, clone OVARC1002165, weakly similar to
           3-OXO-5-ALPHA-STEROID 4-DEHYDROGENASE 2 (EC 1.3.99.5).
           ).
          Length = 318

 Score = 75.4 bits (177), Expect = 2e-13
 Identities = 45/176 (25%), Positives = 89/176 (50%), Gaps = 2/176 (1%)
 Frame = +1

Query: 274 YETYYLQVFAKSSKMNISHYFAGIIHYFACIVVCVGQAPLFCGSQNREKVTWIDTKTTIL 453
           +E  Y+ VF+ +  +++  Y  G+++Y    +  + Q P+  G         +  +    
Sbjct: 145 FECLYVSVFS-NVMIHVVQYCFGLVYYVLVGLTVLSQVPMD-GRNAYITGKNLLMQARWF 202

Query: 454 FVPCTLIFLWCWYEQYQTNIIFAYLRKDKKSNKIVTEDHRVPNGRMFKYVSSPHRMCEII 633
            +   ++F+W    QY+ ++I   LRK+K +  ++  +HR+P G  F+YVSSP+ + E++
Sbjct: 203 HILGMMMFIWSSAHQYKCHVILGNLRKNK-AGVVIHCNHRIPFGDWFEYVSSPNYLAELM 261

Query: 634 MYT--VLVFLITTKTFVCIYLWVLSNQIQTGIHAHEWYKKTFKNYPAKRTAVFPYV 795
           +Y    + F     T+  +   V  NQ  +   +H++YK  F +YP  R A  P++
Sbjct: 262 IYVSMAVTFGFHNLTWWLVVTNVFFNQALSAFLSHQFYKSKFVSYPKHRKAFLPFL 317


>M74047-1|AAA60586.1|  254|Homo sapiens steroid 5-alpha-reductase 2
           protein.
          Length = 254

 Score = 44.0 bits (99), Expect = 7e-04
 Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
 Frame = +1

Query: 526 LRKDKKSNKIVTEDHRVPNGRMFKYVSSPHRMCEIIM---YTVLVFLITTKTFVCIYLWV 696
           LR+ +K  +I    +R+P G +F YVS  + + EII    Y +  + +    F    L  
Sbjct: 167 LRQLRKPGEI---SYRIPQGGLFTYVSGANFLGEIIEWIGYALATWSLPALAFAFFSLCF 223

Query: 697 LSNQIQTGIHAHEWYKKTFKNYPAKRTAVFPYV 795
           L  +     H H +Y K F++YP  R A+ P++
Sbjct: 224 LGLR---AFHHHRFYLKMFEDYPKSRKALIPFI 253


>EF560740-1|ABQ59050.1|  254|Homo sapiens SRD5A2 protein protein.
          Length = 254

 Score = 44.0 bits (99), Expect = 7e-04
 Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
 Frame = +1

Query: 526 LRKDKKSNKIVTEDHRVPNGRMFKYVSSPHRMCEIIM---YTVLVFLITTKTFVCIYLWV 696
           LR+ +K  +I    +R+P G +F YVS  + + EII    Y +  + +    F    L  
Sbjct: 167 LRQLRKPGEI---SYRIPQGGLFTYVSGANFLGEIIEWIGYALATWSLPALAFAFFSLCF 223

Query: 697 LSNQIQTGIHAHEWYKKTFKNYPAKRTAVFPYV 795
           L  +     H H +Y K F++YP  R A+ P++
Sbjct: 224 LGLR---AFHHHRFYLKMFEDYPKSRKALIPFI 253


>BC113641-1|AAI13642.1|  254|Homo sapiens steroid-5-alpha-reductase,
           alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-d
           protein.
          Length = 254

 Score = 44.0 bits (99), Expect = 7e-04
 Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
 Frame = +1

Query: 526 LRKDKKSNKIVTEDHRVPNGRMFKYVSSPHRMCEIIM---YTVLVFLITTKTFVCIYLWV 696
           LR+ +K  +I    +R+P G +F YVS  + + EII    Y +  + +    F    L  
Sbjct: 167 LRQLRKPGEI---SYRIPQGGLFTYVSGANFLGEIIEWIGYALATWSLPALAFAFFSLCF 223

Query: 697 LSNQIQTGIHAHEWYKKTFKNYPAKRTAVFPYV 795
           L  +     H H +Y K F++YP  R A+ P++
Sbjct: 224 LGLR---AFHHHRFYLKMFEDYPKSRKALIPFI 253


>BC112252-1|AAI12253.1|  254|Homo sapiens steroid-5-alpha-reductase,
           alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-d
           protein.
          Length = 254

 Score = 44.0 bits (99), Expect = 7e-04
 Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
 Frame = +1

Query: 526 LRKDKKSNKIVTEDHRVPNGRMFKYVSSPHRMCEIIM---YTVLVFLITTKTFVCIYLWV 696
           LR+ +K  +I    +R+P G +F YVS  + + EII    Y +  + +    F    L  
Sbjct: 167 LRQLRKPGEI---SYRIPQGGLFTYVSGANFLGEIIEWIGYALATWSLPALAFAFFSLCF 223

Query: 697 LSNQIQTGIHAHEWYKKTFKNYPAKRTAVFPYV 795
           L  +     H H +Y K F++YP  R A+ P++
Sbjct: 224 LGLR---AFHHHRFYLKMFEDYPKSRKALIPFI 253


>AY884245-1|AAW56942.1|  254|Homo sapiens steroid-5-alpha-reductase,
           alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-d
           protein.
          Length = 254

 Score = 44.0 bits (99), Expect = 7e-04
 Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
 Frame = +1

Query: 526 LRKDKKSNKIVTEDHRVPNGRMFKYVSSPHRMCEIIM---YTVLVFLITTKTFVCIYLWV 696
           LR+ +K  +I    +R+P G +F YVS  + + EII    Y +  + +    F    L  
Sbjct: 167 LRQLRKPGEI---SYRIPQGGLFTYVSGANFLGEIIEWIGYALATWSLPALAFAFFSLCF 223

Query: 697 LSNQIQTGIHAHEWYKKTFKNYPAKRTAVFPYV 795
           L  +     H H +Y K F++YP  R A+ P++
Sbjct: 224 LGLR---AFHHHRFYLKMFEDYPKSRKALIPFI 253


>M68886-1|AAA60995.1|  259|Homo sapiens steroid 5-alpha-reductase
           protein.
          Length = 259

 Score = 38.7 bits (86), Expect = 0.025
 Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
 Frame = +1

Query: 568 HRVPNGRMFKYVSSPHRMCEIIM---YTVLVFLITTKTFVCIYLWVLSNQIQTGIHAHEW 738
           +++P G +F+YV++ +   EI+    Y +  + +    F       LS + +   H HEW
Sbjct: 183 YKIPRGGLFEYVTAANYFGEIMEWCGYALASWSVQGAAFAFFTFCFLSGRAKE--H-HEW 239

Query: 739 YKKTFKNYPAKRTAVFPYV 795
           Y + F+ YP  R  + P++
Sbjct: 240 YLRKFEEYPKFRKIIIPFL 258


>M32313-1|AAA35490.1|  259|Homo sapiens protein ( Human steroid
           5-alpha-reductase mRNA, complete cds. ).
          Length = 259

 Score = 38.7 bits (86), Expect = 0.025
 Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
 Frame = +1

Query: 568 HRVPNGRMFKYVSSPHRMCEIIM---YTVLVFLITTKTFVCIYLWVLSNQIQTGIHAHEW 738
           +++P G +F+YV++ +   EI+    Y +  + +    F       LS + +   H HEW
Sbjct: 183 YKIPRGGLFEYVTAANYFGEIMEWCGYALASWSVQGAAFAFFTFCFLSGRAKE--H-HEW 239

Query: 739 YKKTFKNYPAKRTAVFPYV 795
           Y + F+ YP  R  + P++
Sbjct: 240 YLRKFEEYPKFRKIIIPFL 258


>BT006834-1|AAP35480.1|  259|Homo sapiens steroid-5-alpha-reductase,
           alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-d
           protein.
          Length = 259

 Score = 38.7 bits (86), Expect = 0.025
 Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
 Frame = +1

Query: 568 HRVPNGRMFKYVSSPHRMCEIIM---YTVLVFLITTKTFVCIYLWVLSNQIQTGIHAHEW 738
           +++P G +F+YV++ +   EI+    Y +  + +    F       LS + +   H HEW
Sbjct: 183 YKIPRGGLFEYVTAANYFGEIMEWCGYALASWSVQGAAFAFFTFCFLSGRAKE--H-HEW 239

Query: 739 YKKTFKNYPAKRTAVFPYV 795
           Y + F+ YP  R  + P++
Sbjct: 240 YLRKFEEYPKFRKIIIPFL 258


>BC008673-1|AAH08673.1|  259|Homo sapiens steroid-5-alpha-reductase,
           alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-d
           protein.
          Length = 259

 Score = 38.7 bits (86), Expect = 0.025
 Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
 Frame = +1

Query: 568 HRVPNGRMFKYVSSPHRMCEIIM---YTVLVFLITTKTFVCIYLWVLSNQIQTGIHAHEW 738
           +++P G +F+YV++ +   EI+    Y +  + +    F       LS + +   H HEW
Sbjct: 183 YKIPRGGLFEYVTAANYFGEIMEWCGYALASWSVQGAAFAFFTFCFLSGRAKE--H-HEW 239

Query: 739 YKKTFKNYPAKRTAVFPYV 795
           Y + F+ YP  R  + P++
Sbjct: 240 YLRKFEEYPKFRKIIIPFL 258


>BC007033-1|AAH07033.1|  259|Homo sapiens steroid-5-alpha-reductase,
           alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-d
           protein.
          Length = 259

 Score = 38.7 bits (86), Expect = 0.025
 Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
 Frame = +1

Query: 568 HRVPNGRMFKYVSSPHRMCEIIM---YTVLVFLITTKTFVCIYLWVLSNQIQTGIHAHEW 738
           +++P G +F+YV++ +   EI+    Y +  + +    F       LS + +   H HEW
Sbjct: 183 YKIPRGGLFEYVTAANYFGEIMEWCGYALASWSVQGAAFAFFTFCFLSGRAKE--H-HEW 239

Query: 739 YKKTFKNYPAKRTAVFPYV 795
           Y + F+ YP  R  + P++
Sbjct: 240 YLRKFEEYPKFRKIIIPFL 258


>AY341029-1|AAP88935.1|  259|Homo sapiens steroid-5-alpha-reductase,
           alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-d
           protein.
          Length = 259

 Score = 38.7 bits (86), Expect = 0.025
 Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
 Frame = +1

Query: 568 HRVPNGRMFKYVSSPHRMCEIIM---YTVLVFLITTKTFVCIYLWVLSNQIQTGIHAHEW 738
           +++P G +F+YV++ +   EI+    Y +  + +    F       LS + +   H HEW
Sbjct: 183 YKIPRGGLFEYVTAANYFGEIMEWCGYALASWSVQGAAFAFFTFCFLSGRAKE--H-HEW 239

Query: 739 YKKTFKNYPAKRTAVFPYV 795
           Y + F+ YP  R  + P++
Sbjct: 240 YLRKFEEYPKFRKIIIPFL 258


>AF113128-1|AAF14869.1|  211|Homo sapiens steroid-5-alpha-reductase
           isoform protein.
          Length = 211

 Score = 38.7 bits (86), Expect = 0.025
 Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
 Frame = +1

Query: 568 HRVPNGRMFKYVSSPHRMCEIIM---YTVLVFLITTKTFVCIYLWVLSNQIQTGIHAHEW 738
           +++P G +F+YV++ +   EI+    Y +  + +    F       LS + +   H HEW
Sbjct: 135 YKIPRGGLFEYVTAANYFGEIMEWCGYALASWSVQGAAFAFFTFCFLSGRAKE--H-HEW 191

Query: 739 YKKTFKNYPAKRTAVFPYV 795
           Y + F+ YP  R  + P++
Sbjct: 192 YLRKFEEYPKFRKIIIPFL 210


>AF052126-1|AAC28620.1|  259|Homo sapiens steroid 5-alpha-reductase
           protein.
          Length = 259

 Score = 38.7 bits (86), Expect = 0.025
 Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
 Frame = +1

Query: 568 HRVPNGRMFKYVSSPHRMCEIIM---YTVLVFLITTKTFVCIYLWVLSNQIQTGIHAHEW 738
           +++P G +F+YV++ +   EI+    Y +  + +    F       LS + +   H HEW
Sbjct: 183 YKIPRGGLFEYVTAANYFGEIMEWCGYALASWSVQGAAFAFFTFCFLSGRAKE--H-HEW 239

Query: 739 YKKTFKNYPAKRTAVFPYV 795
           Y + F+ YP  R  + P++
Sbjct: 240 YLRKFEEYPKFRKIIIPFL 258


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,681,012
Number of Sequences: 237096
Number of extensions: 2349916
Number of successful extensions: 7457
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 7342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7437
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10147868276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -