BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_K17
(815 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457312-1|CAG33593.1| 318|Homo sapiens FLJ13352 protein. 75 2e-13
BC002480-1|AAH02480.1| 318|Homo sapiens steroid 5 alpha-reducta... 75 2e-13
AK023414-1|BAB14568.1| 318|Homo sapiens protein ( Homo sapiens ... 75 2e-13
M74047-1|AAA60586.1| 254|Homo sapiens steroid 5-alpha-reductase... 44 7e-04
EF560740-1|ABQ59050.1| 254|Homo sapiens SRD5A2 protein protein. 44 7e-04
BC113641-1|AAI13642.1| 254|Homo sapiens steroid-5-alpha-reducta... 44 7e-04
BC112252-1|AAI12253.1| 254|Homo sapiens steroid-5-alpha-reducta... 44 7e-04
AY884245-1|AAW56942.1| 254|Homo sapiens steroid-5-alpha-reducta... 44 7e-04
M68886-1|AAA60995.1| 259|Homo sapiens steroid 5-alpha-reductase... 39 0.025
M32313-1|AAA35490.1| 259|Homo sapiens protein ( Human steroid 5... 39 0.025
BT006834-1|AAP35480.1| 259|Homo sapiens steroid-5-alpha-reducta... 39 0.025
BC008673-1|AAH08673.1| 259|Homo sapiens steroid-5-alpha-reducta... 39 0.025
BC007033-1|AAH07033.1| 259|Homo sapiens steroid-5-alpha-reducta... 39 0.025
AY341029-1|AAP88935.1| 259|Homo sapiens steroid-5-alpha-reducta... 39 0.025
AF113128-1|AAF14869.1| 211|Homo sapiens steroid-5-alpha-reducta... 39 0.025
AF052126-1|AAC28620.1| 259|Homo sapiens steroid 5-alpha-reducta... 39 0.025
>CR457312-1|CAG33593.1| 318|Homo sapiens FLJ13352 protein.
Length = 318
Score = 75.4 bits (177), Expect = 2e-13
Identities = 45/176 (25%), Positives = 89/176 (50%), Gaps = 2/176 (1%)
Frame = +1
Query: 274 YETYYLQVFAKSSKMNISHYFAGIIHYFACIVVCVGQAPLFCGSQNREKVTWIDTKTTIL 453
+E Y+ VF+ + +++ Y G+++Y + + Q P+ G + +
Sbjct: 145 FECLYVSVFS-NVMIHVVQYCFGLVYYVLVGLTVLSQVPMD-GRNAYITGKNLLMQARWF 202
Query: 454 FVPCTLIFLWCWYEQYQTNIIFAYLRKDKKSNKIVTEDHRVPNGRMFKYVSSPHRMCEII 633
+ ++F+W QY+ ++I LRK+K + ++ +HR+P G F+YVSSP+ + E++
Sbjct: 203 HILGMMMFIWSSAHQYKCHVILGNLRKNK-AGVVIHCNHRIPFGDWFEYVSSPNYLAELM 261
Query: 634 MYT--VLVFLITTKTFVCIYLWVLSNQIQTGIHAHEWYKKTFKNYPAKRTAVFPYV 795
+Y + F T+ + V NQ + +H++YK F +YP R A P++
Sbjct: 262 IYVSMAVTFGFHNLTWWLVVTNVFFNQALSAFLSHQFYKSKFVSYPKHRKAFLPFL 317
>BC002480-1|AAH02480.1| 318|Homo sapiens steroid 5 alpha-reductase
2-like protein.
Length = 318
Score = 75.4 bits (177), Expect = 2e-13
Identities = 45/176 (25%), Positives = 89/176 (50%), Gaps = 2/176 (1%)
Frame = +1
Query: 274 YETYYLQVFAKSSKMNISHYFAGIIHYFACIVVCVGQAPLFCGSQNREKVTWIDTKTTIL 453
+E Y+ VF+ + +++ Y G+++Y + + Q P+ G + +
Sbjct: 145 FECLYVSVFS-NVMIHVVQYCFGLVYYVLVGLTVLSQVPMD-GRNAYITGKNLLMQARWF 202
Query: 454 FVPCTLIFLWCWYEQYQTNIIFAYLRKDKKSNKIVTEDHRVPNGRMFKYVSSPHRMCEII 633
+ ++F+W QY+ ++I LRK+K + ++ +HR+P G F+YVSSP+ + E++
Sbjct: 203 HILGMMMFIWSSAHQYKCHVILGNLRKNK-AGVVIHCNHRIPFGDWFEYVSSPNYLAELM 261
Query: 634 MYT--VLVFLITTKTFVCIYLWVLSNQIQTGIHAHEWYKKTFKNYPAKRTAVFPYV 795
+Y + F T+ + V NQ + +H++YK F +YP R A P++
Sbjct: 262 IYVSMAVTFGFHNLTWWLVVTNVFFNQALSAFLSHQFYKSKFVSYPKHRKAFLPFL 317
>AK023414-1|BAB14568.1| 318|Homo sapiens protein ( Homo sapiens
cDNA FLJ13352 fis, clone OVARC1002165, weakly similar to
3-OXO-5-ALPHA-STEROID 4-DEHYDROGENASE 2 (EC 1.3.99.5).
).
Length = 318
Score = 75.4 bits (177), Expect = 2e-13
Identities = 45/176 (25%), Positives = 89/176 (50%), Gaps = 2/176 (1%)
Frame = +1
Query: 274 YETYYLQVFAKSSKMNISHYFAGIIHYFACIVVCVGQAPLFCGSQNREKVTWIDTKTTIL 453
+E Y+ VF+ + +++ Y G+++Y + + Q P+ G + +
Sbjct: 145 FECLYVSVFS-NVMIHVVQYCFGLVYYVLVGLTVLSQVPMD-GRNAYITGKNLLMQARWF 202
Query: 454 FVPCTLIFLWCWYEQYQTNIIFAYLRKDKKSNKIVTEDHRVPNGRMFKYVSSPHRMCEII 633
+ ++F+W QY+ ++I LRK+K + ++ +HR+P G F+YVSSP+ + E++
Sbjct: 203 HILGMMMFIWSSAHQYKCHVILGNLRKNK-AGVVIHCNHRIPFGDWFEYVSSPNYLAELM 261
Query: 634 MYT--VLVFLITTKTFVCIYLWVLSNQIQTGIHAHEWYKKTFKNYPAKRTAVFPYV 795
+Y + F T+ + V NQ + +H++YK F +YP R A P++
Sbjct: 262 IYVSMAVTFGFHNLTWWLVVTNVFFNQALSAFLSHQFYKSKFVSYPKHRKAFLPFL 317
>M74047-1|AAA60586.1| 254|Homo sapiens steroid 5-alpha-reductase 2
protein.
Length = 254
Score = 44.0 bits (99), Expect = 7e-04
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Frame = +1
Query: 526 LRKDKKSNKIVTEDHRVPNGRMFKYVSSPHRMCEIIM---YTVLVFLITTKTFVCIYLWV 696
LR+ +K +I +R+P G +F YVS + + EII Y + + + F L
Sbjct: 167 LRQLRKPGEI---SYRIPQGGLFTYVSGANFLGEIIEWIGYALATWSLPALAFAFFSLCF 223
Query: 697 LSNQIQTGIHAHEWYKKTFKNYPAKRTAVFPYV 795
L + H H +Y K F++YP R A+ P++
Sbjct: 224 LGLR---AFHHHRFYLKMFEDYPKSRKALIPFI 253
>EF560740-1|ABQ59050.1| 254|Homo sapiens SRD5A2 protein protein.
Length = 254
Score = 44.0 bits (99), Expect = 7e-04
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Frame = +1
Query: 526 LRKDKKSNKIVTEDHRVPNGRMFKYVSSPHRMCEIIM---YTVLVFLITTKTFVCIYLWV 696
LR+ +K +I +R+P G +F YVS + + EII Y + + + F L
Sbjct: 167 LRQLRKPGEI---SYRIPQGGLFTYVSGANFLGEIIEWIGYALATWSLPALAFAFFSLCF 223
Query: 697 LSNQIQTGIHAHEWYKKTFKNYPAKRTAVFPYV 795
L + H H +Y K F++YP R A+ P++
Sbjct: 224 LGLR---AFHHHRFYLKMFEDYPKSRKALIPFI 253
>BC113641-1|AAI13642.1| 254|Homo sapiens steroid-5-alpha-reductase,
alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-d
protein.
Length = 254
Score = 44.0 bits (99), Expect = 7e-04
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Frame = +1
Query: 526 LRKDKKSNKIVTEDHRVPNGRMFKYVSSPHRMCEIIM---YTVLVFLITTKTFVCIYLWV 696
LR+ +K +I +R+P G +F YVS + + EII Y + + + F L
Sbjct: 167 LRQLRKPGEI---SYRIPQGGLFTYVSGANFLGEIIEWIGYALATWSLPALAFAFFSLCF 223
Query: 697 LSNQIQTGIHAHEWYKKTFKNYPAKRTAVFPYV 795
L + H H +Y K F++YP R A+ P++
Sbjct: 224 LGLR---AFHHHRFYLKMFEDYPKSRKALIPFI 253
>BC112252-1|AAI12253.1| 254|Homo sapiens steroid-5-alpha-reductase,
alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-d
protein.
Length = 254
Score = 44.0 bits (99), Expect = 7e-04
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Frame = +1
Query: 526 LRKDKKSNKIVTEDHRVPNGRMFKYVSSPHRMCEIIM---YTVLVFLITTKTFVCIYLWV 696
LR+ +K +I +R+P G +F YVS + + EII Y + + + F L
Sbjct: 167 LRQLRKPGEI---SYRIPQGGLFTYVSGANFLGEIIEWIGYALATWSLPALAFAFFSLCF 223
Query: 697 LSNQIQTGIHAHEWYKKTFKNYPAKRTAVFPYV 795
L + H H +Y K F++YP R A+ P++
Sbjct: 224 LGLR---AFHHHRFYLKMFEDYPKSRKALIPFI 253
>AY884245-1|AAW56942.1| 254|Homo sapiens steroid-5-alpha-reductase,
alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-d
protein.
Length = 254
Score = 44.0 bits (99), Expect = 7e-04
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Frame = +1
Query: 526 LRKDKKSNKIVTEDHRVPNGRMFKYVSSPHRMCEIIM---YTVLVFLITTKTFVCIYLWV 696
LR+ +K +I +R+P G +F YVS + + EII Y + + + F L
Sbjct: 167 LRQLRKPGEI---SYRIPQGGLFTYVSGANFLGEIIEWIGYALATWSLPALAFAFFSLCF 223
Query: 697 LSNQIQTGIHAHEWYKKTFKNYPAKRTAVFPYV 795
L + H H +Y K F++YP R A+ P++
Sbjct: 224 LGLR---AFHHHRFYLKMFEDYPKSRKALIPFI 253
>M68886-1|AAA60995.1| 259|Homo sapiens steroid 5-alpha-reductase
protein.
Length = 259
Score = 38.7 bits (86), Expect = 0.025
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = +1
Query: 568 HRVPNGRMFKYVSSPHRMCEIIM---YTVLVFLITTKTFVCIYLWVLSNQIQTGIHAHEW 738
+++P G +F+YV++ + EI+ Y + + + F LS + + H HEW
Sbjct: 183 YKIPRGGLFEYVTAANYFGEIMEWCGYALASWSVQGAAFAFFTFCFLSGRAKE--H-HEW 239
Query: 739 YKKTFKNYPAKRTAVFPYV 795
Y + F+ YP R + P++
Sbjct: 240 YLRKFEEYPKFRKIIIPFL 258
>M32313-1|AAA35490.1| 259|Homo sapiens protein ( Human steroid
5-alpha-reductase mRNA, complete cds. ).
Length = 259
Score = 38.7 bits (86), Expect = 0.025
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = +1
Query: 568 HRVPNGRMFKYVSSPHRMCEIIM---YTVLVFLITTKTFVCIYLWVLSNQIQTGIHAHEW 738
+++P G +F+YV++ + EI+ Y + + + F LS + + H HEW
Sbjct: 183 YKIPRGGLFEYVTAANYFGEIMEWCGYALASWSVQGAAFAFFTFCFLSGRAKE--H-HEW 239
Query: 739 YKKTFKNYPAKRTAVFPYV 795
Y + F+ YP R + P++
Sbjct: 240 YLRKFEEYPKFRKIIIPFL 258
>BT006834-1|AAP35480.1| 259|Homo sapiens steroid-5-alpha-reductase,
alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-d
protein.
Length = 259
Score = 38.7 bits (86), Expect = 0.025
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = +1
Query: 568 HRVPNGRMFKYVSSPHRMCEIIM---YTVLVFLITTKTFVCIYLWVLSNQIQTGIHAHEW 738
+++P G +F+YV++ + EI+ Y + + + F LS + + H HEW
Sbjct: 183 YKIPRGGLFEYVTAANYFGEIMEWCGYALASWSVQGAAFAFFTFCFLSGRAKE--H-HEW 239
Query: 739 YKKTFKNYPAKRTAVFPYV 795
Y + F+ YP R + P++
Sbjct: 240 YLRKFEEYPKFRKIIIPFL 258
>BC008673-1|AAH08673.1| 259|Homo sapiens steroid-5-alpha-reductase,
alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-d
protein.
Length = 259
Score = 38.7 bits (86), Expect = 0.025
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = +1
Query: 568 HRVPNGRMFKYVSSPHRMCEIIM---YTVLVFLITTKTFVCIYLWVLSNQIQTGIHAHEW 738
+++P G +F+YV++ + EI+ Y + + + F LS + + H HEW
Sbjct: 183 YKIPRGGLFEYVTAANYFGEIMEWCGYALASWSVQGAAFAFFTFCFLSGRAKE--H-HEW 239
Query: 739 YKKTFKNYPAKRTAVFPYV 795
Y + F+ YP R + P++
Sbjct: 240 YLRKFEEYPKFRKIIIPFL 258
>BC007033-1|AAH07033.1| 259|Homo sapiens steroid-5-alpha-reductase,
alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-d
protein.
Length = 259
Score = 38.7 bits (86), Expect = 0.025
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = +1
Query: 568 HRVPNGRMFKYVSSPHRMCEIIM---YTVLVFLITTKTFVCIYLWVLSNQIQTGIHAHEW 738
+++P G +F+YV++ + EI+ Y + + + F LS + + H HEW
Sbjct: 183 YKIPRGGLFEYVTAANYFGEIMEWCGYALASWSVQGAAFAFFTFCFLSGRAKE--H-HEW 239
Query: 739 YKKTFKNYPAKRTAVFPYV 795
Y + F+ YP R + P++
Sbjct: 240 YLRKFEEYPKFRKIIIPFL 258
>AY341029-1|AAP88935.1| 259|Homo sapiens steroid-5-alpha-reductase,
alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-d
protein.
Length = 259
Score = 38.7 bits (86), Expect = 0.025
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = +1
Query: 568 HRVPNGRMFKYVSSPHRMCEIIM---YTVLVFLITTKTFVCIYLWVLSNQIQTGIHAHEW 738
+++P G +F+YV++ + EI+ Y + + + F LS + + H HEW
Sbjct: 183 YKIPRGGLFEYVTAANYFGEIMEWCGYALASWSVQGAAFAFFTFCFLSGRAKE--H-HEW 239
Query: 739 YKKTFKNYPAKRTAVFPYV 795
Y + F+ YP R + P++
Sbjct: 240 YLRKFEEYPKFRKIIIPFL 258
>AF113128-1|AAF14869.1| 211|Homo sapiens steroid-5-alpha-reductase
isoform protein.
Length = 211
Score = 38.7 bits (86), Expect = 0.025
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = +1
Query: 568 HRVPNGRMFKYVSSPHRMCEIIM---YTVLVFLITTKTFVCIYLWVLSNQIQTGIHAHEW 738
+++P G +F+YV++ + EI+ Y + + + F LS + + H HEW
Sbjct: 135 YKIPRGGLFEYVTAANYFGEIMEWCGYALASWSVQGAAFAFFTFCFLSGRAKE--H-HEW 191
Query: 739 YKKTFKNYPAKRTAVFPYV 795
Y + F+ YP R + P++
Sbjct: 192 YLRKFEEYPKFRKIIIPFL 210
>AF052126-1|AAC28620.1| 259|Homo sapiens steroid 5-alpha-reductase
protein.
Length = 259
Score = 38.7 bits (86), Expect = 0.025
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = +1
Query: 568 HRVPNGRMFKYVSSPHRMCEIIM---YTVLVFLITTKTFVCIYLWVLSNQIQTGIHAHEW 738
+++P G +F+YV++ + EI+ Y + + + F LS + + H HEW
Sbjct: 183 YKIPRGGLFEYVTAANYFGEIMEWCGYALASWSVQGAAFAFFTFCFLSGRAKE--H-HEW 239
Query: 739 YKKTFKNYPAKRTAVFPYV 795
Y + F+ YP R + P++
Sbjct: 240 YLRKFEEYPKFRKIIIPFL 258
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,681,012
Number of Sequences: 237096
Number of extensions: 2349916
Number of successful extensions: 7457
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 7342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7437
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10147868276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -