Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_K17
(815 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71178-13|CAF31498.1| 342|Caenorhabditis elegans Hypothetical p... 78 7e-15
Z71178-11|CAA94885.2| 309|Caenorhabditis elegans Hypothetical p... 78 7e-15
Z68116-2|CAA92173.1| 243|Caenorhabditis elegans Hypothetical pr... 49 5e-06
Z68115-3|CAA92168.1| 243|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z68222-3|CAA92499.1| 253|Caenorhabditis elegans Hypothetical pr... 42 7e-04
AC006608-6|AAF39753.1| 308|Caenorhabditis elegans Steroid alpha... 36 0.046
Z78413-1|CAB01663.1| 727|Caenorhabditis elegans Hypothetical pr... 31 0.75
Z70038-1|CAA93884.1| 2219|Caenorhabditis elegans Hypothetical pr... 31 1.3
U88184-3|AAK31519.1| 648|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z93374-5|CAB07557.1| 935|Caenorhabditis elegans Hypothetical pr... 29 4.0
U88309-1|AAB42331.3| 395|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z83216-8|CAB05677.1| 261|Caenorhabditis elegans Hypothetical pr... 29 5.3
U29535-9|AAK31453.2| 2148|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z75554-6|CAA99958.1| 304|Caenorhabditis elegans Hypothetical pr... 28 9.2
>Z71178-13|CAF31498.1| 342|Caenorhabditis elegans Hypothetical
protein B0024.13b protein.
Length = 342
Score = 78.2 bits (184), Expect = 7e-15
Identities = 55/177 (31%), Positives = 85/177 (48%), Gaps = 2/177 (1%)
Frame = +1
Query: 274 YETYYLQVFAKSSKMNISHYFAGIIHYFACIVVCVGQAPLFCGSQNREKVTWIDTKTTIL 453
YET ++ V++ S+MN+ HY GI+HY + + + + V+ ID +
Sbjct: 171 YETIFVSVYS-DSRMNLFHYAVGIVHYIILPISIMCETQGVASKLPQLHVS-IDDISLTQ 228
Query: 454 FVPCTLIFLWCWYEQYQTNIIFAYLRKDKKSNKIVTEDHRVPNGRMFKYVSSPHRMCEII 633
+ L ++ C ++Q+Q A RK + I + + G F VS PH + EI
Sbjct: 229 WAGAVLFWI-CNWKQHQLAEQIANTRKGPRG-LIRNYAYGICFGGWFNLVSCPHFLFEIC 286
Query: 634 MYTVLVFLITTKTFVC--IYLWVLSNQIQTGIHAHEWYKKTFKNYPAKRTAVFPYVL 798
+Y L FL+ +V I ++V NQ + H WY KTF YP R A+ PYVL
Sbjct: 287 IYLSL-FLVIPDAYVYRFIIMFVCINQTFAALITHSWYHKTFPKYPKSRKALIPYVL 342
>Z71178-11|CAA94885.2| 309|Caenorhabditis elegans Hypothetical
protein B0024.13a protein.
Length = 309
Score = 78.2 bits (184), Expect = 7e-15
Identities = 55/177 (31%), Positives = 85/177 (48%), Gaps = 2/177 (1%)
Frame = +1
Query: 274 YETYYLQVFAKSSKMNISHYFAGIIHYFACIVVCVGQAPLFCGSQNREKVTWIDTKTTIL 453
YET ++ V++ S+MN+ HY GI+HY + + + + V+ ID +
Sbjct: 138 YETIFVSVYS-DSRMNLFHYAVGIVHYIILPISIMCETQGVASKLPQLHVS-IDDISLTQ 195
Query: 454 FVPCTLIFLWCWYEQYQTNIIFAYLRKDKKSNKIVTEDHRVPNGRMFKYVSSPHRMCEII 633
+ L ++ C ++Q+Q A RK + I + + G F VS PH + EI
Sbjct: 196 WAGAVLFWI-CNWKQHQLAEQIANTRKGPRG-LIRNYAYGICFGGWFNLVSCPHFLFEIC 253
Query: 634 MYTVLVFLITTKTFVC--IYLWVLSNQIQTGIHAHEWYKKTFKNYPAKRTAVFPYVL 798
+Y L FL+ +V I ++V NQ + H WY KTF YP R A+ PYVL
Sbjct: 254 IYLSL-FLVIPDAYVYRFIIMFVCINQTFAALITHSWYHKTFPKYPKSRKALIPYVL 309
>Z68116-2|CAA92173.1| 243|Caenorhabditis elegans Hypothetical
protein F42F12.3 protein.
Length = 243
Score = 48.8 bits (111), Expect = 5e-06
Identities = 21/76 (27%), Positives = 38/76 (50%)
Frame = +1
Query: 568 HRVPNGRMFKYVSSPHRMCEIIMYTVLVFLITTKTFVCIYLWVLSNQIQTGIHAHEWYKK 747
+++P G +++Y+S P+ EI+ + L + ++ +N I H WYK+
Sbjct: 167 YKIPTGFLYEYISCPNYFGEIMEWIGYAILGWNLPALAFAIFTFANIGPRAIAHHNWYKE 226
Query: 748 TFKNYPAKRTAVFPYV 795
F YP R A+ PY+
Sbjct: 227 KFPKYPPTRRALIPYI 242
>Z68115-3|CAA92168.1| 243|Caenorhabditis elegans Hypothetical
protein F19H6.4 protein.
Length = 243
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/110 (22%), Positives = 53/110 (48%)
Frame = +1
Query: 466 TLIFLWCWYEQYQTNIIFAYLRKDKKSNKIVTEDHRVPNGRMFKYVSSPHRMCEIIMYTV 645
+L++ Y ++++ I LR D + +++P G +++Y+S P+ EI+ +
Sbjct: 139 SLMYCTGMYINHKSDTILRELRADGGTG------YKIPTGFLYEYISCPNYAGEIMEWIG 192
Query: 646 LVFLITTKTFVCIYLWVLSNQIQTGIHAHEWYKKTFKNYPAKRTAVFPYV 795
L + ++ ++N + H+WYK+TF YP R + P +
Sbjct: 193 YSILAWNLPALAFAIFTIANIGPRAVAHHKWYKETFPGYPPNRRILIPRI 242
>Z68222-3|CAA92499.1| 253|Caenorhabditis elegans Hypothetical
protein ZK1251.3 protein.
Length = 253
Score = 41.5 bits (93), Expect = 7e-04
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +1
Query: 568 HRVPNGRMFKYVSSPHRMCEIIMYTVLVFLITTKTFVCIYLWVLSNQIQTGIHAHEWYKK 747
+ +P G F+Y+S P+ E + + + + +++ N + H+WY+K
Sbjct: 176 YSIPRGHYFEYISCPNYFGECLQWIGYALAARSFPAIAFAFFIVCNLAPRAMSHHKWYQK 235
Query: 748 TF-KNYPAKRTAVFPYV 795
F + YP R A+ P V
Sbjct: 236 MFGEQYPRDRHALVPGV 252
>AC006608-6|AAF39753.1| 308|Caenorhabditis elegans Steroid alpha
reductase familyprotein 1 protein.
Length = 308
Score = 35.5 bits (78), Expect = 0.046
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
Frame = +1
Query: 508 NIIFAYLRKDKKSNKIVTEDHRVPNGRMFKYVSSPHRMCEIIMYTVLVFLITTKTFVCIY 687
+I+ LR + + + P +F YVS P+ E+ + + F I ++ I
Sbjct: 212 HILLRNLRPAGTRERRIPKPDGNPLSLLFNYVSCPNYTYEVASW--IFFSIMVQSLPAI- 268
Query: 688 LWVLSNQIQTGIHA---HEWYKKTFKNYPAKRTAVFPYVL 798
++ + Q I A H Y K F +YP R A+ P+VL
Sbjct: 269 IFTTAGFAQMAIWAQGKHRNYLKEFPDYPKNRKAIVPFVL 308
>Z78413-1|CAB01663.1| 727|Caenorhabditis elegans Hypothetical
protein T01C3.1 protein.
Length = 727
Score = 31.5 bits (68), Expect = 0.75
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +1
Query: 280 TYYLQVFAKSSKMNISHYFAGIIHYFACIVVCVGQAPLF-CGSQNREKVTW 429
T+ L + K+ +++++ Y IH F V C + + CGS++ V W
Sbjct: 337 THVLDQYTKNLELSVNSYTGATIHNFYTQVACSPVSDVIACGSEDSRAVVW 387
>Z70038-1|CAA93884.1| 2219|Caenorhabditis elegans Hypothetical protein
ZK1067.2 protein.
Length = 2219
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = +1
Query: 358 ACIVVCVGQAPLFCGSQNREKVTWIDTKTTILFVPCTLIFLWCWYEQYQTNIIFAYLRKD 537
AC+ +C Q P CG+ R K + T+ LI + Y + ++ +++K
Sbjct: 1881 ACLGICGEQCPKICGTCERNKYIECVSGTSSTSRVHRLIMIPKCYHVFPVEVLDDHVKKQ 1940
Query: 538 KKSNK 552
K++N+
Sbjct: 1941 KEANE 1945
>U88184-3|AAK31519.1| 648|Caenorhabditis elegans Hypothetical
protein F36H5.8 protein.
Length = 648
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +2
Query: 491 MNSIKQTSYSHISEKTKNQIKLLQ 562
MN I Q +S +SEK+KN+I LL+
Sbjct: 239 MNPIAQLGFSLLSEKSKNRISLLR 262
>Z93374-5|CAB07557.1| 935|Caenorhabditis elegans Hypothetical
protein C06C6.7 protein.
Length = 935
Score = 29.1 bits (62), Expect = 4.0
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 448 ILFVPCTLIFLWCWYEQ 498
I + T+ FLWCWY+Q
Sbjct: 809 IAVILVTITFLWCWYDQ 825
>U88309-1|AAB42331.3| 395|Caenorhabditis elegans Hypothetical
protein T23B3.4 protein.
Length = 395
Score = 29.1 bits (62), Expect = 4.0
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +1
Query: 403 SQNREKVTWIDTKTTILFVPCTLIFLWCWYEQY 501
S N+EK+ K T + + ++F +CW Y
Sbjct: 266 STNQEKILIAKKKVTRMLITLVIVFAFCWVPSY 298
>Z83216-8|CAB05677.1| 261|Caenorhabditis elegans Hypothetical
protein C08F11.10 protein.
Length = 261
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/56 (26%), Positives = 30/56 (53%)
Frame = +1
Query: 511 IIFAYLRKDKKSNKIVTEDHRVPNGRMFKYVSSPHRMCEIIMYTVLVFLITTKTFV 678
I + L++ K+ ++ED + GR+ Y S R+ + +MY ++ +T+K V
Sbjct: 31 IFSSILKRKKRQQDKLSEDVKKRCGRVESYKSCCDRLHQALMYMLVENAVTSKQLV 86
>U29535-9|AAK31453.2| 2148|Caenorhabditis elegans Hypothetical
protein C25H3.8 protein.
Length = 2148
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = -1
Query: 500 YCSYQHQRKIKVQGTNKIVVFVSIHVTFSLF--*LPQNSGACPTHTTIHA 357
+CS QH+++ + +N + +++H+ SLF QN G T HA
Sbjct: 562 WCSMQHEKQTRNLCSNDFSITIALHIDTSLFVNQSKQNKGMVVTPPIRHA 611
>Z75554-6|CAA99958.1| 304|Caenorhabditis elegans Hypothetical
protein ZC455.7 protein.
Length = 304
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +1
Query: 619 MCEIIMYTVLVFLITTKTFVCIYLWVLSNQIQTGIHAHEWY 741
M E IMY ++V + + T +C+ + SN + W+
Sbjct: 1 MTENIMYIIIVLIASIATILCLLIVGRSNTFHPNLQGPIWF 41
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,103,355
Number of Sequences: 27780
Number of extensions: 394843
Number of successful extensions: 898
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 896
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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