Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_K15
         (388 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92544-4|CAM26350.1|  373|Homo sapiens rhomboid, veinlet-like 1 ...    31   0.98 
Z92544-3|CAM26349.1|  438|Homo sapiens rhomboid, veinlet-like 1 ...    31   0.98 
Y17108-1|CAA76629.1|  438|Homo sapiens rhomboid-related protein ...    31   0.98 
BC120875-1|AAI20876.1|  438|Homo sapiens rhomboid, veinlet-like ...    31   0.98 
BC120874-1|AAI20875.1|  438|Homo sapiens rhomboid, veinlet-like ...    31   0.98 
AJ272344-1|CAC00640.1|  373|Homo sapiens rhomboid-related protei...    31   0.98 
AE006464-9|AAK61241.1|  438|Homo sapiens rhomboid related protei...    31   0.98 

>Z92544-4|CAM26350.1|  373|Homo sapiens rhomboid, veinlet-like 1
           (Drosophila) protein.
          Length = 373

 Score = 31.5 bits (68), Expect = 0.98
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -2

Query: 219 ILITVYINYFSFDILCVYIPPPP 151
           +L  V+ N F++D+L  +IPPPP
Sbjct: 351 LLFAVFWNVFAYDLLGAHIPPPP 373


>Z92544-3|CAM26349.1|  438|Homo sapiens rhomboid, veinlet-like 1
           (Drosophila) protein.
          Length = 438

 Score = 31.5 bits (68), Expect = 0.98
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -2

Query: 219 ILITVYINYFSFDILCVYIPPPP 151
           +L  V+ N F++D+L  +IPPPP
Sbjct: 416 LLFAVFWNVFAYDLLGAHIPPPP 438


>Y17108-1|CAA76629.1|  438|Homo sapiens rhomboid-related protein
           protein.
          Length = 438

 Score = 31.5 bits (68), Expect = 0.98
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -2

Query: 219 ILITVYINYFSFDILCVYIPPPP 151
           +L  V+ N F++D+L  +IPPPP
Sbjct: 416 LLFAVFWNVFAYDLLGAHIPPPP 438


>BC120875-1|AAI20876.1|  438|Homo sapiens rhomboid, veinlet-like 1
           (Drosophila) protein.
          Length = 438

 Score = 31.5 bits (68), Expect = 0.98
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -2

Query: 219 ILITVYINYFSFDILCVYIPPPP 151
           +L  V+ N F++D+L  +IPPPP
Sbjct: 416 LLFAVFWNVFAYDLLGAHIPPPP 438


>BC120874-1|AAI20875.1|  438|Homo sapiens rhomboid, veinlet-like 1
           (Drosophila) protein.
          Length = 438

 Score = 31.5 bits (68), Expect = 0.98
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -2

Query: 219 ILITVYINYFSFDILCVYIPPPP 151
           +L  V+ N F++D+L  +IPPPP
Sbjct: 416 LLFAVFWNVFAYDLLGAHIPPPP 438


>AJ272344-1|CAC00640.1|  373|Homo sapiens rhomboid-related protein
           protein.
          Length = 373

 Score = 31.5 bits (68), Expect = 0.98
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -2

Query: 219 ILITVYINYFSFDILCVYIPPPP 151
           +L  V+ N F++D+L  +IPPPP
Sbjct: 351 LLFAVFWNVFAYDLLGAHIPPPP 373


>AE006464-9|AAK61241.1|  438|Homo sapiens rhomboid related protein
           protein.
          Length = 438

 Score = 31.5 bits (68), Expect = 0.98
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -2

Query: 219 ILITVYINYFSFDILCVYIPPPP 151
           +L  V+ N F++D+L  +IPPPP
Sbjct: 416 LLFAVFWNVFAYDLLGAHIPPPP 438


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,009,566
Number of Sequences: 237096
Number of extensions: 487098
Number of successful extensions: 873
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 873
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2641190740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)