Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_K15
         (388 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY180919-1|AAN87272.1|  884|Drosophila melanogaster ORF1 protein.      30   1.2  
AF456125-1|AAL57609.1|  832|Drosophila melanogaster reverse tran...    30   1.2  
M38643-2|AAA28940.1|  192|Drosophila melanogaster protein ( D.me...    28   4.9  
M22874-2|AAA28675.1|  916|Drosophila melanogaster protein ( D.me...    28   4.9  

>AY180919-1|AAN87272.1|  884|Drosophila melanogaster ORF1 protein.
          Length = 884

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -2

Query: 102 VSNNYLIIGDFNAHHASW 49
           ++ N+LI GDFN+ H +W
Sbjct: 152 INGNFLICGDFNSRHRAW 169


>AF456125-1|AAL57609.1|  832|Drosophila melanogaster reverse
           transcriptase protein.
          Length = 832

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -2

Query: 102 VSNNYLIIGDFNAHHASW 49
           ++ N+LI GDFN+ H +W
Sbjct: 100 INGNFLICGDFNSRHRAW 117


>M38643-2|AAA28940.1|  192|Drosophila melanogaster protein (
           D.melanogaster mobileelement jockey gag-specific protein
           gene, complete cds.).
          Length = 192

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -2

Query: 180 ILCVYIPPPPNGKFTINLLKDSCSKFVSNNYLIIGDFNAHHASW 49
           +  VY+PP    ++ ++  K S    + N ++  GD+NA HA W
Sbjct: 106 VAAVYLPPAE--RWIVDDFK-SMFAALGNKFIAGGDYNAKHAWW 146


>M22874-2|AAA28675.1|  916|Drosophila melanogaster protein (
           D.melanogaster LINEelement J-1, clone J-1. ).
          Length = 916

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -2

Query: 180 ILCVYIPPPPNGKFTINLLKDSCSKFVSNNYLIIGDFNAHHASW 49
           +  VY+PP    ++ ++  K S    + N ++  GD+NA HA W
Sbjct: 106 VAAVYLPPAE--RWIVDDFK-SMFAALGNKFIAGGDYNAKHAWW 146


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,651,682
Number of Sequences: 53049
Number of extensions: 159810
Number of successful extensions: 322
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 322
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1066083345
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)