SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_K11
         (423 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2108|AAF48428.1|   93|Drosophila melanogaster CG9091-PA...   140   7e-34
AE013599-3544|AAF46957.1|   89|Drosophila melanogaster CG9873-PA...   113   9e-26
BT023213-1|AAY55629.1|   89|Drosophila melanogaster IP02962p pro...   109   1e-24
BT023224-1|AAY55640.1|  103|Drosophila melanogaster IP02862p pro...    59   2e-09
BT023192-1|AAY55608.1|   78|Drosophila melanogaster IP03162p pro...    45   5e-05

>AE014298-2108|AAF48428.1|   93|Drosophila melanogaster CG9091-PA
           protein.
          Length = 93

 Score =  140 bits (339), Expect = 7e-34
 Identities = 64/89 (71%), Positives = 68/89 (76%)
 Frame = +1

Query: 49  GPSSFGKRRNXPHTLCRSCGXSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXXX 228
           G SSFGKR N  HTLCR CG SSYHIQKS CAQCGYPAAKLRSY+WSVKA          
Sbjct: 4   GTSSFGKRHNKTHTLCRRCGRSSYHIQKSTCAQCGYPAAKLRSYNWSVKAKRRKTTGTGR 63

Query: 229 MRHLKIVRRRFRNGFKEGKPTPPKKAVAS 315
           M+HLK+VRRRFRNGF+EG    PKKAVAS
Sbjct: 64  MQHLKVVRRRFRNGFREGTQAKPKKAVAS 92


>AE013599-3544|AAF46957.1|   89|Drosophila melanogaster CG9873-PA
           protein.
          Length = 89

 Score =  113 bits (272), Expect = 9e-26
 Identities = 49/78 (62%), Positives = 58/78 (74%)
 Frame = +1

Query: 49  GPSSFGKRRNXPHTLCRSCGXSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXXX 228
           G +SFGKR N  HT+CR CG SSYH+QKSKC+QCGYPAAK RS++WS KA          
Sbjct: 4   GTTSFGKRHNKTHTICRRCGNSSYHLQKSKCSQCGYPAAKTRSFNWSRKAKGRKAQGTGR 63

Query: 229 MRHLKIVRRRFRNGFKEG 282
           MR+LK +RRRFRNG +EG
Sbjct: 64  MRYLKNLRRRFRNGLREG 81


>BT023213-1|AAY55629.1|   89|Drosophila melanogaster IP02962p
           protein.
          Length = 89

 Score =  109 bits (262), Expect = 1e-24
 Identities = 48/78 (61%), Positives = 57/78 (73%)
 Frame = +1

Query: 49  GPSSFGKRRNXPHTLCRSCGXSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXXX 228
           G +SFGKR N  HT+CR CG SSYH+QKSKC+Q GYPAAK RS++WS KA          
Sbjct: 4   GTTSFGKRHNKTHTICRRCGNSSYHLQKSKCSQSGYPAAKTRSFNWSRKAKGRKAQGTGR 63

Query: 229 MRHLKIVRRRFRNGFKEG 282
           MR+LK +RRRFRNG +EG
Sbjct: 64  MRYLKNLRRRFRNGLREG 81


>BT023224-1|AAY55640.1|  103|Drosophila melanogaster IP02862p
           protein.
          Length = 103

 Score = 59.3 bits (137), Expect = 2e-09
 Identities = 23/33 (69%), Positives = 27/33 (81%)
 Frame = +1

Query: 49  GPSSFGKRRNXPHTLCRSCGXSSYHIQKSKCAQ 147
           G +SFGKR N  HT+CR CG SSYH+QKSKC+Q
Sbjct: 4   GTTSFGKRHNKTHTICRRCGNSSYHLQKSKCSQ 36


>BT023192-1|AAY55608.1|   78|Drosophila melanogaster IP03162p
           protein.
          Length = 78

 Score = 44.8 bits (101), Expect = 5e-05
 Identities = 17/25 (68%), Positives = 19/25 (76%)
 Frame = +1

Query: 49  GPSSFGKRRNXPHTLCRSCGXSSYH 123
           G +SFGKR N  HT+CR CG SSYH
Sbjct: 4   GTTSFGKRHNKTHTICRRCGNSSYH 28


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,527,712
Number of Sequences: 53049
Number of extensions: 247340
Number of successful extensions: 483
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 476
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 483
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1292733852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -