BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_K11
(423 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014298-2108|AAF48428.1| 93|Drosophila melanogaster CG9091-PA... 140 7e-34
AE013599-3544|AAF46957.1| 89|Drosophila melanogaster CG9873-PA... 113 9e-26
BT023213-1|AAY55629.1| 89|Drosophila melanogaster IP02962p pro... 109 1e-24
BT023224-1|AAY55640.1| 103|Drosophila melanogaster IP02862p pro... 59 2e-09
BT023192-1|AAY55608.1| 78|Drosophila melanogaster IP03162p pro... 45 5e-05
>AE014298-2108|AAF48428.1| 93|Drosophila melanogaster CG9091-PA
protein.
Length = 93
Score = 140 bits (339), Expect = 7e-34
Identities = 64/89 (71%), Positives = 68/89 (76%)
Frame = +1
Query: 49 GPSSFGKRRNXPHTLCRSCGXSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXXX 228
G SSFGKR N HTLCR CG SSYHIQKS CAQCGYPAAKLRSY+WSVKA
Sbjct: 4 GTSSFGKRHNKTHTLCRRCGRSSYHIQKSTCAQCGYPAAKLRSYNWSVKAKRRKTTGTGR 63
Query: 229 MRHLKIVRRRFRNGFKEGKPTPPKKAVAS 315
M+HLK+VRRRFRNGF+EG PKKAVAS
Sbjct: 64 MQHLKVVRRRFRNGFREGTQAKPKKAVAS 92
>AE013599-3544|AAF46957.1| 89|Drosophila melanogaster CG9873-PA
protein.
Length = 89
Score = 113 bits (272), Expect = 9e-26
Identities = 49/78 (62%), Positives = 58/78 (74%)
Frame = +1
Query: 49 GPSSFGKRRNXPHTLCRSCGXSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXXX 228
G +SFGKR N HT+CR CG SSYH+QKSKC+QCGYPAAK RS++WS KA
Sbjct: 4 GTTSFGKRHNKTHTICRRCGNSSYHLQKSKCSQCGYPAAKTRSFNWSRKAKGRKAQGTGR 63
Query: 229 MRHLKIVRRRFRNGFKEG 282
MR+LK +RRRFRNG +EG
Sbjct: 64 MRYLKNLRRRFRNGLREG 81
>BT023213-1|AAY55629.1| 89|Drosophila melanogaster IP02962p
protein.
Length = 89
Score = 109 bits (262), Expect = 1e-24
Identities = 48/78 (61%), Positives = 57/78 (73%)
Frame = +1
Query: 49 GPSSFGKRRNXPHTLCRSCGXSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXXX 228
G +SFGKR N HT+CR CG SSYH+QKSKC+Q GYPAAK RS++WS KA
Sbjct: 4 GTTSFGKRHNKTHTICRRCGNSSYHLQKSKCSQSGYPAAKTRSFNWSRKAKGRKAQGTGR 63
Query: 229 MRHLKIVRRRFRNGFKEG 282
MR+LK +RRRFRNG +EG
Sbjct: 64 MRYLKNLRRRFRNGLREG 81
>BT023224-1|AAY55640.1| 103|Drosophila melanogaster IP02862p
protein.
Length = 103
Score = 59.3 bits (137), Expect = 2e-09
Identities = 23/33 (69%), Positives = 27/33 (81%)
Frame = +1
Query: 49 GPSSFGKRRNXPHTLCRSCGXSSYHIQKSKCAQ 147
G +SFGKR N HT+CR CG SSYH+QKSKC+Q
Sbjct: 4 GTTSFGKRHNKTHTICRRCGNSSYHLQKSKCSQ 36
>BT023192-1|AAY55608.1| 78|Drosophila melanogaster IP03162p
protein.
Length = 78
Score = 44.8 bits (101), Expect = 5e-05
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +1
Query: 49 GPSSFGKRRNXPHTLCRSCGXSSYH 123
G +SFGKR N HT+CR CG SSYH
Sbjct: 4 GTTSFGKRHNKTHTICRRCGNSSYH 28
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,527,712
Number of Sequences: 53049
Number of extensions: 247340
Number of successful extensions: 483
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 476
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 483
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1292733852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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