Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_K09
         (754 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.65 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   2.0  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   3.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   3.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   3.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   3.5  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   6.0  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   6.0  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.0 bits (52), Expect = 0.65
 Identities = 16/53 (30%), Positives = 21/53 (39%)
 Frame = +3

Query: 327  VPLYIHGFTALPDDDWGHCRDPVHPLPGSLHGGNRSRPIQYYIYYDICHRFNN 485
            VP Y   FT       G+  D   P  G    G  ++      YY+IC+R  N
Sbjct: 867  VPFYGQSFTLTK----GNNHDQGVPSAGPGEAGEYTKQPGMLAYYEICNRIRN 915



 Score = 25.0 bits (52), Expect = 0.65
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 405  PGSLHGGNRSRPIQYYIYYDICH 473
            PG    G  +R   +  YY+ICH
Sbjct: 1662 PGPGQAGEYTRAAGFLAYYEICH 1684



 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -3

Query: 230  TASSPIWITLLCTMALTLRPSEVS 159
            T +SP W T       T RP+  S
Sbjct: 1046 TTTSPWWTTTTTRRTTTTRPTTTS 1069


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = -1

Query: 748  SRTSTATRSHQSTLKTIGIKPQLRWHRTVHTSYSSTPAAVLRYSW 614
            + T T  R+H +T  +  +         + T+  +TP A+L +SW
Sbjct: 1001 TETHTNNRTHSATSNS-SVNANTN---NIPTNAGTTPGAILAFSW 1041


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 10/39 (25%), Positives = 20/39 (51%)
 Frame = -3

Query: 704  NNWNKAATAMAPDSSHILLVHTCRRSSVLMATKISSSGH 588
            +NW      + P    +L+  TC+ +  L+  +I S+G+
Sbjct: 942  DNWTSFYYNIIPILFFMLVCFTCKSNIQLIVAQILSTGY 980


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 10/39 (25%), Positives = 20/39 (51%)
 Frame = -3

Query: 704  NNWNKAATAMAPDSSHILLVHTCRRSSVLMATKISSSGH 588
            +NW      + P    +L+  TC+ +  L+  +I S+G+
Sbjct: 942  DNWTSFYYNIIPILFFMLVCFTCKSNIQLIVAQILSTGY 980


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 10/39 (25%), Positives = 20/39 (51%)
 Frame = -3

Query: 704  NNWNKAATAMAPDSSHILLVHTCRRSSVLMATKISSSGH 588
            +NW      + P    +L+  TC+ +  L+  +I S+G+
Sbjct: 942  DNWTSFYYNIIPILFFMLVCFTCKSNIQLIVAQILSTGY 980


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 10/39 (25%), Positives = 20/39 (51%)
 Frame = -3

Query: 704  NNWNKAATAMAPDSSHILLVHTCRRSSVLMATKISSSGH 588
            +NW      + P    +L+  TC+ +  L+  +I S+G+
Sbjct: 942  DNWTSFYYNIIPILFFMLVCFTCKSNIQLIVAQILSTGY 980


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
 Frame = +3

Query: 393 VHPLPGS--LHGGNRSRPIQYYIYYDICHRFN 482
           V+P  G+  +   NR   I YY++  I  RFN
Sbjct: 213 VYPFEGAREIVDKNRRGEIFYYMHQQIIARFN 244


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 660 THPTRPHLPPFFGTHGD 610
           TH   P +PP F T GD
Sbjct: 689 THADLPPVPPNFPTCGD 705


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,561
Number of Sequences: 336
Number of extensions: 4305
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)