Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_K09
(754 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0782 + 31969677-31969767,31969863-31969960,31970059-319702... 102 3e-22
07_03_0435 + 18182657-18183509,18184477-18184574,18184663-181848... 100 1e-21
08_02_0439 + 17184384-17184474,17184614-17184711,17185134-171853... 95 7e-20
09_02_0423 + 9153088-9153181,9153281-9153378,9153532-9153708,915... 91 7e-19
09_03_0154 + 12831120-12831222,12831761-12831858,12832019-128321... 89 4e-18
03_05_0773 + 27612237-27612330,27612426-27612523,27612605-276127... 89 4e-18
08_02_0695 + 20122838-20122949,20123238-20123335,20123520-201236... 83 2e-16
01_06_1402 + 37052996-37053449,37053533-37053630,37053718-370538... 83 2e-16
03_06_0502 - 34384285-34384503,34384595-34384755,34384854-343849... 81 9e-16
12_02_0917 + 24281029-24281137,24281998-24282095,24282196-242823... 74 1e-13
02_05_0704 - 31064996-31065214,31065306-31065466,31065583-310656... 50 2e-06
01_06_0807 + 32125987-32126029,32126030-32126208,32126760-321269... 31 0.98
07_01_0184 - 1304328-1304951,1305328-1305441,1305549-1305839,130... 30 1.7
04_04_0585 - 26386248-26386271,26386510-26386699,26387363-263874... 29 3.0
08_02_1605 - 28166338-28166418,28166496-28166567,28166655-281667... 29 4.0
06_03_1393 + 29846884-29847465 29 5.2
12_01_0590 - 4813764-4814401,4814785-4814872,4815176-4815376,481... 28 9.2
03_05_1130 + 30602452-30602712,30603033-30603950,30605501-306055... 28 9.2
02_01_0327 - 2241228-2242509,2243227-2243247,2243299-2243614,224... 28 9.2
>01_06_0782 +
31969677-31969767,31969863-31969960,31970059-31970235,
31970367-31970467,31970626-31970701,31970827-31970886,
31970979-31971215,31971612-31971686,31971981-31972039,
31972110-31972201,31972463-31972623,31972964-31973176
Length = 479
Score = 102 bits (245), Expect = 3e-22
Identities = 60/161 (37%), Positives = 88/161 (54%)
Frame = +1
Query: 271 PEEARKGNVTYGIDDTPPWYLCIFMALQHYLTMIGAIVAIPFILCPALCMEETDPDRSNI 450
P E +G Y ID PPW I + QHY+ +G V IP +L P M +D DR +
Sbjct: 13 PMEQLQG-FEYCIDSNPPWGEAIILGFQHYILALGTAVMIPAVLVPM--MGGSDGDRVRV 69
Query: 451 ISTMIFVTGLITWLQATFGCRLPIVQGGTISFLVPTLAILNLPAWKCPDEEILVAMSTEE 630
+ T++FVTG+ T LQ+ FG RLP V GG+ +F+VP +AI+ + L A+ +
Sbjct: 70 VQTLLFVTGINTLLQSLFGTRLPTVIGGSYAFVVPIMAII--------QDSSLAAIPDDH 121
Query: 631 RRQVWTSRMCELSGAIAVAALFQLFLGYFGVIGSLXRFVTP 753
R + T R + GA+ V++ Q+ LGY + G RF +P
Sbjct: 122 ERFLQTMR--AIQGALIVSSSIQIILGYSQLWGIFSRFFSP 160
>07_03_0435 +
18182657-18183509,18184477-18184574,18184663-18184833,
18185524-18185624,18185702-18185837,18186007-18186057,
18186202-18186489,18186610-18186844,18186924-18187204,
18187336-18187557
Length = 811
Score = 100 bits (239), Expect = 1e-21
Identities = 59/167 (35%), Positives = 88/167 (52%)
Frame = +1
Query: 253 VRGEQKPEEARKGNVTYGIDDTPPWYLCIFMALQHYLTMIGAIVAIPFILCPALCMEETD 432
V E P G + G+ + P W IF +QHYL++ G++V +P IL P M +D
Sbjct: 261 VTSETAPLYGESG-LRCGVTENPGWVPLIFYGIQHYLSIAGSLVFVPLILVPT--MGGSD 317
Query: 433 PDRSNIISTMIFVTGLITWLQATFGCRLPIVQGGTISFLVPTLAILNLPAWKCPDEEILV 612
D + +IST++ V+GL T L FG RLP++QG + +L P L I N E
Sbjct: 318 EDTATVISTILLVSGLTTILHTFFGSRLPLIQGSSFVYLAPALVISN--------SEEFR 369
Query: 613 AMSTEERRQVWTSRMCELSGAIAVAALFQLFLGYFGVIGSLXRFVTP 753
+S + + + M EL GAI V ++FQ+ LGY G++ R + P
Sbjct: 370 NLSENKFKHI----MRELQGAILVGSVFQIILGYSGLMSLFLRLINP 412
>08_02_0439 +
17184384-17184474,17184614-17184711,17185134-17185310,
17185450-17185550,17186028-17186103,17186438-17186682,
17186784-17186880,17186990-17187076,17187268-17187362,
17187462-17187553,17187630-17187707,17187832-17187992,
17188095-17188307
Length = 536
Score = 94.7 bits (225), Expect = 7e-20
Identities = 51/151 (33%), Positives = 82/151 (54%)
Frame = +1
Query: 301 YGIDDTPPWYLCIFMALQHYLTMIGAIVAIPFILCPALCMEETDPDRSNIISTMIFVTGL 480
Y ID P W I + QHY+ +G V IP +L P M D++ ++ TM+FVTG+
Sbjct: 22 YCIDSNPSWGEAIALGFQHYILCLGTAVMIPTLLVPL--MGGNAHDKAKVVQTMLFVTGI 79
Query: 481 ITWLQATFGCRLPIVQGGTISFLVPTLAILNLPAWKCPDEEILVAMSTEERRQVWTSRMC 660
T LQ FG RLP + GG+ +F++P ++I+ P+ L ++ + R + T R
Sbjct: 80 NTMLQTLFGTRLPTIIGGSYAFVIPVISIIKDPS--------LAQITDDHTRFIMTMR-- 129
Query: 661 ELSGAIAVAALFQLFLGYFGVIGSLXRFVTP 753
+ GA+ +++ Q+ LGY + G RF +P
Sbjct: 130 AIQGALIISSCIQIILGYSQLWGICSRFFSP 160
>09_02_0423 +
9153088-9153181,9153281-9153378,9153532-9153708,
9153827-9153927,9154334-9154490
Length = 208
Score = 91.5 bits (217), Expect = 7e-19
Identities = 53/151 (35%), Positives = 81/151 (53%)
Frame = +1
Query: 301 YGIDDTPPWYLCIFMALQHYLTMIGAIVAIPFILCPALCMEETDPDRSNIISTMIFVTGL 480
Y ID P W I + QHY+ +G V IP +L P M D D++ ++ T++FVTG+
Sbjct: 23 YCIDSNPSWGEAIALGFQHYILSLGTAVMIPTMLVPL--MGGNDHDKARVVQTLLFVTGI 80
Query: 481 ITWLQATFGCRLPIVQGGTISFLVPTLAILNLPAWKCPDEEILVAMSTEERRQVWTSRMC 660
T LQ FG RLP + GG+ +F+VP L+I+ P+ L ++ R V T R
Sbjct: 81 KTLLQTLFGTRLPTIIGGSYAFVVPILSIIRDPS--------LAQIADGHTRFVQTMR-- 130
Query: 661 ELSGAIAVAALFQLFLGYFGVIGSLXRFVTP 753
+ G++ V++ Q+ LGY + RF +P
Sbjct: 131 AIQGSLIVSSSIQIILGYSQLWAICSRFFSP 161
>09_03_0154 +
12831120-12831222,12831761-12831858,12832019-12832195,
12832307-12832407,12832503-12832578,12832665-12832724,
12832810-12832994,12833078-12833174,12833279-12833365,
12833453-12833511,12833617-12833708,12833821-12833898,
12834000-12834160,12834267-12834485
Length = 530
Score = 89.0 bits (211), Expect = 4e-18
Identities = 47/161 (29%), Positives = 86/161 (53%)
Frame = +1
Query: 271 PEEARKGNVTYGIDDTPPWYLCIFMALQHYLTMIGAIVAIPFILCPALCMEETDPDRSNI 450
P + + +V++ I PPW I + QH++ M+G V IP L P M + +++ +
Sbjct: 16 PPKEQLASVSFCITSPPPWPEAIILGFQHFIVMLGTTVIIPSALVPQ--MGGGNDEKARV 73
Query: 451 ISTMIFVTGLITWLQATFGCRLPIVQGGTISFLVPTLAILNLPAWKCPDEEILVAMSTEE 630
I T++FV G+ T Q FG RLP+V GG+ +F+ PT++I+ + + +
Sbjct: 74 IQTLLFVAGINTLFQTFFGSRLPVVMGGSYTFVAPTISIILAGRYN----------NEAD 123
Query: 631 RRQVWTSRMCELSGAIAVAALFQLFLGYFGVIGSLXRFVTP 753
R+ + M GA+ +A+ Q+ LG+ G+ ++ R ++P
Sbjct: 124 PREKFLRTMRGTQGALIIASTIQMILGFSGLWRNVVRLLSP 164
>03_05_0773 +
27612237-27612330,27612426-27612523,27612605-27612781,
27612869-27612969,27613079-27613154,27613255-27613314,
27613412-27613596,27613669-27613807,27614229-27614315,
27614939-27615127,27615243-27615461
Length = 474
Score = 89.0 bits (211), Expect = 4e-18
Identities = 54/161 (33%), Positives = 85/161 (52%)
Frame = +1
Query: 271 PEEARKGNVTYGIDDTPPWYLCIFMALQHYLTMIGAIVAIPFILCPALCMEETDPDRSNI 450
P+E G V Y I PPW + +A QHYL M+G V + IL P M +++ +
Sbjct: 14 PKEQYDG-VDYCITSPPPWLTAVLLAFQHYLVMLGTTVIVATILVP--LMGGGHVEKAIV 70
Query: 451 ISTMIFVTGLITWLQATFGCRLPIVQGGTISFLVPTLAILNLPAWKCPDEEILVAMSTEE 630
+ T++F+ G+ T LQ G RLP V G + +++ P +AI+ P + +V E
Sbjct: 71 VQTILFLAGINTLLQVHLGTRLPAVMGASYAYIYPAVAIILSPRF------AIVVDPFE- 123
Query: 631 RRQVWTSRMCELSGAIAVAALFQLFLGYFGVIGSLXRFVTP 753
R V+T R L GA+ +A + Q +G+FG+ RF++P
Sbjct: 124 -RFVYTMR--SLQGALIIAGVVQAIIGFFGIWRIFIRFLSP 161
>08_02_0695 +
20122838-20122949,20123238-20123335,20123520-20123696,
20123790-20123890,20124049-20124124,20124213-20124272,
20124362-20124546,20124638-20124734,20124817-20124903,
20124989-20125047,20125157-20125248,20125436-20125513,
20125617-20125777,20125880-20126098
Length = 533
Score = 83.4 bits (197), Expect = 2e-16
Identities = 45/154 (29%), Positives = 81/154 (52%)
Frame = +1
Query: 292 NVTYGIDDTPPWYLCIFMALQHYLTMIGAIVAIPFILCPALCMEETDPDRSNIISTMIFV 471
+V+Y I PPW + + QHY+ M+G V IP L P M + +++ +I T++FV
Sbjct: 26 SVSYCITSPPPWPEAVILGFQHYIVMLGTSVIIPSALVPQ--MGGGNEEKARVIQTLLFV 83
Query: 472 TGLITWLQATFGCRLPIVQGGTISFLVPTLAILNLPAWKCPDEEILVAMSTEERRQVWTS 651
G+ T Q+ FG RLP V GG+ + + PT++I+ + + + + +
Sbjct: 84 AGINTLCQSFFGTRLPAVMGGSYTIVAPTISIILAGRYS----------NEADPHEKFLR 133
Query: 652 RMCELSGAIAVAALFQLFLGYFGVIGSLXRFVTP 753
M GA+ +A+ Q+ LG+ G+ ++ R ++P
Sbjct: 134 TMRGTQGALIIASTIQIILGFSGLWRNVVRLLSP 167
>01_06_1402 +
37052996-37053449,37053533-37053630,37053718-37053888,
37054017-37054117,37054928-37055063,37055155-37055205,
37055311-37055598,37055896-37056130,37056408-37056523,
37057300-37057496,37057739-37057745
Length = 617
Score = 83.0 bits (196), Expect = 2e-16
Identities = 47/151 (31%), Positives = 79/151 (52%)
Frame = +1
Query: 301 YGIDDTPPWYLCIFMALQHYLTMIGAIVAIPFILCPALCMEETDPDRSNIISTMIFVTGL 480
Y + D+P + QHY++M+G+I+ IP ++ PA M + D + ++ST++ V+G+
Sbjct: 143 YELRDSPGVFPIAVYGFQHYISMLGSIILIPLLMVPA--MGGSPDDMAAVVSTVLLVSGM 200
Query: 481 ITWLQATFGCRLPIVQGGTISFLVPTLAILNLPAWKCPDEEILVAMSTEERRQVWTSRMC 660
T L G RLP+VQG + +L P LAI+ P + ++ + + M
Sbjct: 201 TTLLHTFCGTRLPLVQGPSFVYLAPALAIIYSPEF--------FGLNHNNFKHI----MK 248
Query: 661 ELSGAIAVAALFQLFLGYFGVIGSLXRFVTP 753
L GAI + FQ+ LGY G++ R + P
Sbjct: 249 HLQGAIIIGGAFQVLLGYTGLMSLFLRLINP 279
>03_06_0502 -
34384285-34384503,34384595-34384755,34384854-34384931,
34385444-34385595,34385645-34385703,34385808-34385894,
34385990-34386086,34386232-34386416,34386494-34386553,
34386640-34386715,34386824-34386924,34387039-34387215,
34387302-34387399,34387505-34387604
Length = 549
Score = 81.0 bits (191), Expect = 9e-16
Identities = 45/153 (29%), Positives = 79/153 (51%)
Frame = +1
Query: 295 VTYGIDDTPPWYLCIFMALQHYLTMIGAIVAIPFILCPALCMEETDPDRSNIISTMIFVT 474
++Y + PPW I + QHYL M+G V IP L P M + +++ +I T++FV
Sbjct: 23 ISYCLTSPPPWPEAILLGFQHYLVMLGTTVIIPTALVPQ--MGGGNEEKARVIQTLLFVA 80
Query: 475 GLITWLQATFGCRLPIVQGGTISFLVPTLAILNLPAWKCPDEEILVAMSTEERRQVWTSR 654
G+ T +Q+ G RLP V GG+ +F+ PT++I+ + + + +
Sbjct: 81 GINTLIQSFLGTRLPAVIGGSYTFVAPTISIILAGRYN----------GIADPHEKFVRI 130
Query: 655 MCELSGAIAVAALFQLFLGYFGVIGSLXRFVTP 753
M GA+ VA+ Q+ +G+ G+ + R ++P
Sbjct: 131 MRGTQGALIVASTLQIIMGFSGLWRIVVRLLSP 163
>12_02_0917 +
24281029-24281137,24281998-24282095,24282196-24282372,
24282490-24282590,24282684-24282759,24282843-24282902,
24282999-24283195,24283296-24283392,24283478-24283564,
24283925-24283983,24284535-24284626,24284706-24284783,
24284891-24285051,24285303-24285530
Length = 539
Score = 74.1 bits (174), Expect = 1e-13
Identities = 47/161 (29%), Positives = 79/161 (49%)
Frame = +1
Query: 271 PEEARKGNVTYGIDDTPPWYLCIFMALQHYLTMIGAIVAIPFILCPALCMEETDPDRSNI 450
P + ++ Y + P W +A HYL M+G+ V + + PA M T D++ +
Sbjct: 18 PPHEQFHHLAYCVHSNPSWVQVAALAFLHYLVMLGSTVMLASTIVPA--MGGTPGDKARV 75
Query: 451 ISTMIFVTGLITWLQATFGCRLPIVQGGTISFLVPTLAILNLPAWKCPDEEILVAMSTEE 630
I + +F++G+ T LQ G RLP V + +F+VP L+I D E S+ +
Sbjct: 76 IQSFLFMSGINTLLQTLVGTRLPTVMNASFAFVVPVLSI-------AKDFEQNNYASSHQ 128
Query: 631 RRQVWTSRMCELSGAIAVAALFQLFLGYFGVIGSLXRFVTP 753
R +T M GA+ VA++ + LG+ + G+ R +P
Sbjct: 129 R---FTHTMRATQGALIVASILNMILGFSTIWGAFARKFSP 166
>02_05_0704 -
31064996-31065214,31065306-31065466,31065583-31065660,
31066560-31066651,31066775-31066833,31066924-31067010,
31067118-31067214,31067311-31067495,31067593-31067665,
31067725-31067805,31067948-31068048,31068133-31068246,
31068391-31068488,31069789-31069915
Length = 523
Score = 50.0 bits (114), Expect = 2e-06
Identities = 45/161 (27%), Positives = 71/161 (44%)
Frame = +1
Query: 271 PEEARKGNVTYGIDDTPPWYLCIFMALQHYLTMIGAIVAIPFILCPALCMEETDPDRSNI 450
P + + V+Y I PPW I + QHYL M+G V IP L P + N
Sbjct: 24 PVKDQLPGVSYCITSPPPWPEAILLGFQHYLVMLGTTVIIPTALVPQM--------GGN- 74
Query: 451 ISTMIFVTGLITWLQATFGCRLPIVQGGTISFLVPTLAILNLPAWKCPDEEILVAMSTEE 630
+ FG RLP V GG+ +F+VPT++I + A + +E
Sbjct: 75 --------------NSFFGTRLPAVIGGSYTFVVPTISI--ILAGRYANE--------PN 110
Query: 631 RRQVWTSRMCELSGAIAVAALFQLFLGYFGVIGSLXRFVTP 753
+ M GA+ VA+ Q+ G+ G+ ++ R+++P
Sbjct: 111 PHTKFLRIMRGTQGALIVASALQIIFGFSGLWRNVARYLSP 151
>01_06_0807 +
32125987-32126029,32126030-32126208,32126760-32126943,
32127714-32127788,32128079-32128188,32128747-32128965,
32129124-32129279,32129759-32129911,32130223-32130349,
32131598-32131728,32131858-32132139
Length = 552
Score = 31.1 bits (67), Expect = 0.98
Identities = 23/61 (37%), Positives = 33/61 (54%)
Frame = +3
Query: 390 PVHPLPGSLHGGNRSRPIQYYIYYDICHRFNNLASGDLRLSTANSSRRHHIIPGADARDT 569
P+ PLP S G RP+Q + Y+I HR +N G++ TA + R I GAD +T
Sbjct: 32 PLFPLP-SKSNGIEKRPLQTFRPYNIAHRGSN---GEIPEETAAAYLR-AIEEGADFIET 86
Query: 570 E 572
+
Sbjct: 87 D 87
>07_01_0184 -
1304328-1304951,1305328-1305441,1305549-1305839,
1305930-1306238,1306326-1307048
Length = 686
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 313 DTPPWYLCIFMALQHYLTMIGAIVAIPFILCPALCMEET 429
+ P W +C AL +L ++ A + PFI+ P L E T
Sbjct: 522 ELPDWVVCYIPALMSFLNILPAPKSFPFII-PYLLFENT 559
>04_04_0585 -
26386248-26386271,26386510-26386699,26387363-26387463,
26387554-26387685,26387759-26387857,26387956-26388127,
26388217-26388512,26388601-26388726,26388848-26389062,
26389154-26389225,26389299-26389368,26389441-26389517,
26389605-26389923,26390034-26390225,26390321-26390551,
26390585-26390950,26392251-26392313,26392394-26392456,
26392544-26392642,26393497-26393523,26394299-26394358,
26395230-26396147,26396243-26397268
Length = 1645
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 238 VCVNDVRGEQKPEEARKGNVTYGIDDTPPW 327
V V D+RGE +P+E+ N G TP W
Sbjct: 532 VSVRDIRGEAEPQESAGSNSFAGNAWTPSW 561
>08_02_1605 -
28166338-28166418,28166496-28166567,28166655-28166771,
28166846-28166956,28167077-28167252,28167340-28167421,
28167662-28167808,28167887-28168252,28168558-28168741,
28169104-28169213,28169452-28169508,28169589-28169600,
28169899-28169961,28170010-28170057,28170166-28170246,
28170326-28170389,28170661-28170686,28170782-28170868,
28170942-28170969,28171194-28171255,28171364-28171576,
28171667-28171774,28171948-28172022,28172136-28172249,
28172597-28172644,28172688-28172767,28172974-28173049,
28173287-28173427,28173685-28173762,28175100-28175204,
28177061-28177147,28177287-28178579
Length = 1463
Score = 29.1 bits (62), Expect = 4.0
Identities = 25/109 (22%), Positives = 48/109 (44%), Gaps = 6/109 (5%)
Frame = +1
Query: 43 TLAVYYHLINIAVLTITALGLVV*RVWFLGLCYIRP------HIRLTSDGRRVNAMVHNN 204
++A ++ L L+I + ++ +W+LGL + + + S G +N +
Sbjct: 242 SMAAFHDLAAFLRLSIESAVMLCLEIWYLGLITVLTGDLDDAQMAVDSLGICMNINGYEG 301
Query: 205 VIQIGLDAVRGVCVNDVRGEQKPEEARKGNVTYGIDDTPPWYLCIFMAL 351
+I IGL+A V V++ G +P A V + LC+ + L
Sbjct: 302 MIFIGLNAAISVRVSNELGSGRPRAAMHAVVVVVAESLLIGLLCMALVL 350
>06_03_1393 + 29846884-29847465
Length = 193
Score = 28.7 bits (61), Expect = 5.2
Identities = 22/64 (34%), Positives = 28/64 (43%)
Frame = -1
Query: 715 STLKTIGIKPQLRWHRTVHTSYSSTPAAVLRYSWRPRSPHQDTSRPADSVSRASAPGMIW 536
S K G+K +LR TP A L + + +S +SRPA S S ASA
Sbjct: 56 SGAKPTGVKNRLRARNQARRVQEFTPPAPLGITMKSKS--SSSSRPAASKSSASASASAA 113
Query: 535 CRLE 524
R E
Sbjct: 114 TRRE 117
>12_01_0590 -
4813764-4814401,4814785-4814872,4815176-4815376,
4816803-4816830,4817136-4817339,4817352-4819136,
4820358-4821139
Length = 1241
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 490 LQATFGCRLPIVQGGTISFLVPTLAILNLPAWKCPDEEIL 609
L+ T LP+ G TI +P+L L+L CP+E ++
Sbjct: 772 LKLTIRKALPMDDGVTILACLPSLVHLDLRLLVCPEERVI 811
>03_05_1130 +
30602452-30602712,30603033-30603950,30605501-30605548,
30605629-30606072
Length = 556
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -2
Query: 291 AFACLLWFLFTSYII-DAHSPDSVQSDLDHVVV 196
+FAC+ + L T ++ D HS DS D DH+ +
Sbjct: 366 SFACICFELATGDVLFDPHSGDSYDRDEDHLAL 398
>02_01_0327 -
2241228-2242509,2243227-2243247,2243299-2243614,
2244232-2244496,2245887-2245985
Length = 660
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -1
Query: 649 SSTPAAVLRYSWRPRSPHQDTSRPADS 569
++TP + LR++WR R PH+D P S
Sbjct: 507 TATPPS-LRHTWRYRPPHKDWPAPVAS 532
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,381,168
Number of Sequences: 37544
Number of extensions: 504906
Number of successful extensions: 1411
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1393
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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