Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_K09
(754 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78410-3|CAB01641.1| 555|Caenorhabditis elegans Hypothetical pr... 68 8e-12
Z82282-2|CAB05274.2| 544|Caenorhabditis elegans Hypothetical pr... 67 1e-11
AF100669-2|AAK39264.1| 546|Caenorhabditis elegans Hypothetical ... 63 2e-10
Z82282-5|CAB05270.1| 555|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z81489-10|CAB04004.2| 337|Caenorhabditis elegans Hypothetical p... 30 1.5
Z77664-2|CAB01217.1| 643|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z73970-5|CAA98248.1| 643|Caenorhabditis elegans Hypothetical pr... 29 4.7
U42848-2|AAA83608.2| 315|Caenorhabditis elegans Hypothetical pr... 28 6.2
AY008141-1|AAG32094.1| 375|Caenorhabditis elegans heterotrimeri... 28 6.2
AF039715-1|AAB96733.2| 375|Caenorhabditis elegans G protein, su... 28 6.2
AB003487-1|BAA22402.1| 375|Caenorhabditis elegans G protein alp... 28 6.2
AB003486-1|BAA22401.1| 375|Caenorhabditis elegans G protein a(s... 28 6.2
Z69634-3|CAA93454.4| 553|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z54218-4|CAA90958.1| 1367|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z49910-9|CAA90125.1| 1367|Caenorhabditis elegans Hypothetical pr... 28 8.2
>Z78410-3|CAB01641.1| 555|Caenorhabditis elegans Hypothetical
protein C51E3.6 protein.
Length = 555
Score = 67.7 bits (158), Expect = 8e-12
Identities = 36/148 (24%), Positives = 72/148 (48%), Gaps = 1/148 (0%)
Frame = +1
Query: 313 DTPPWYLCIFMALQHYLTMIGAIVAIPFILCPALCMEETDPD-RSNIISTMIFVTGLITW 489
DTPP + + LQ + + A++ +P I+ ++C + R +IS+ +G+ T
Sbjct: 25 DTPPIGIALLYGLQQVMVCVSALLTVPLIMADSMCPGSSIAVLRQTLISSTFVSSGISTI 84
Query: 490 LQATFGCRLPIVQGGTISFLVPTLAILNLPAWKCPDEEILVAMSTEERRQVWTSRMCELS 669
+Q FG RL ++QG +++ ++LP C E S +V+ ++ L
Sbjct: 85 IQTLFGMRLALLQGTAFAYVPSVQGFMSLPENTCNATE-----SDYVPEEVYYGKLALLQ 139
Query: 670 GAIAVAALFQLFLGYFGVIGSLXRFVTP 753
G + ++ + +G G++G L +F+ P
Sbjct: 140 GCLIASSFVPILIGATGLVGMLTKFIGP 167
>Z82282-2|CAB05274.2| 544|Caenorhabditis elegans Hypothetical
protein T07G12.2 protein.
Length = 544
Score = 66.9 bits (156), Expect = 1e-11
Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 1/156 (0%)
Frame = +1
Query: 289 GNVTYGIDDTPPWYLCIFMALQHYLTMIGAIVAIPFILCPALCM-EETDPDRSNIISTMI 465
G++ + ++D P F LQ L I A++ P+ + LC ET R +I+
Sbjct: 6 GDLHFHVNDVPHKSAIFFFGLQQMLVCISALLVTPYFVSNLLCAGAETTEVRVQLIAATF 65
Query: 466 FVTGLITWLQATFGCRLPIVQGGTISFLVPTLAILNLPAWKCPDEEILVAMSTEERRQVW 645
+G+ T LQ TFG RL I+ G + +F P L ++ S + Q W
Sbjct: 66 ISSGIATILQTTFGLRLAILHGPSFAFF-PALHTFG---------DVYPCNSDTDTTQ-W 114
Query: 646 TSRMCELSGAIAVAALFQLFLGYFGVIGSLXRFVTP 753
++ +SG++ VA L FLG G++G + + + P
Sbjct: 115 KEKLQMISGSLFVAVLIMPFLGITGMVGRIAKHIGP 150
>AF100669-2|AAK39264.1| 546|Caenorhabditis elegans Hypothetical
protein R11E3.2 protein.
Length = 546
Score = 63.3 bits (147), Expect = 2e-10
Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 1/160 (0%)
Frame = +1
Query: 277 EARKGNVTYGIDDTPPWYLCIFMALQHYLTMIGAIVAIPFILCPALCMEETDPD-RSNII 453
E ++ + + ++D P + + Q + I ++ IP+++ +C + + + R +I
Sbjct: 3 EEKEDELVHHVNDIPSIPTILLIGFQQMMICISMLLVIPYMMSDMVCPGDKETEIRVQLI 62
Query: 454 STMIFVTGLITWLQATFGCRLPIVQGGTISFLVPTLAILNLPAWKCPDEEILVAMSTEER 633
S G+ T LQ TFG RL I+ G + ++L +LN P E
Sbjct: 63 SASFVTAGIATILQTTFGMRLAILHGPSFAYL----PVLNTFQSTYPCNE-------HTD 111
Query: 634 RQVWTSRMCELSGAIAVAALFQLFLGYFGVIGSLXRFVTP 753
+W +M +SG+ VA L G+ G+IG L +F+ P
Sbjct: 112 TSLWQHKMQMISGSCLVAVLVMPLFGFTGLIGFLSQFIGP 151
>Z82282-5|CAB05270.1| 555|Caenorhabditis elegans Hypothetical
protein T07G12.5 protein.
Length = 555
Score = 60.1 bits (139), Expect = 2e-09
Identities = 38/152 (25%), Positives = 73/152 (48%), Gaps = 1/152 (0%)
Frame = +1
Query: 301 YGIDDTPPWYLCIFMALQHYLTMIGAIVAIPFILCPALCMEETDPD-RSNIISTMIFVTG 477
+ +++ P + LQ + + +++ IP+++ LC + + R +IS +G
Sbjct: 6 FHVNEIPSPPSIMLFGLQQMMICLSSLLVIPYVVSDMLCAGDQAMEIRVQLISATFVTSG 65
Query: 478 LITWLQATFGCRLPIVQGGTISFLVPTLAILNLPAWKCPDEEILVAMSTEERRQVWTSRM 657
+ T LQ TFG RL I+ G + +FL P L + C +T+ W +M
Sbjct: 66 IATILQTTFGMRLSILHGPSFAFL-PALHTFQA-TFPCD-------ANTDTSN--WQEKM 114
Query: 658 CELSGAIAVAALFQLFLGYFGVIGSLXRFVTP 753
+SG+ +A L LG+ G++G + +++ P
Sbjct: 115 QMISGSCLIAVLIMPILGFTGLVGKISKYIGP 146
>Z81489-10|CAB04004.2| 337|Caenorhabditis elegans Hypothetical
protein C55A1.8 protein.
Length = 337
Score = 30.3 bits (65), Expect = 1.5
Identities = 9/33 (27%), Positives = 21/33 (63%)
Frame = +1
Query: 337 IFMALQHYLTMIGAIVAIPFILCPALCMEETDP 435
I +++ +++ IG + A+P + PA C++ +P
Sbjct: 152 IILSVIYFIIFIGFVAALPHVQAPAACLQALEP 184
>Z77664-2|CAB01217.1| 643|Caenorhabditis elegans Hypothetical
protein C29A12.6 protein.
Length = 643
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = -1
Query: 730 TRSHQSTLKTIGIKPQLRWHRTVHTSYSSTPAAVLRYSWRPRSPHQDTSRPADSVSRA 557
TRS+Q+T +T WH T + +PA V P P +P D + R+
Sbjct: 364 TRSYQTTTRTTSKPDNTFWHPTESFGTTRSPAPVSTID-SPLKPEVPVIKPMDFMVRS 420
>Z73970-5|CAA98248.1| 643|Caenorhabditis elegans Hypothetical
protein C29A12.6 protein.
Length = 643
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = -1
Query: 730 TRSHQSTLKTIGIKPQLRWHRTVHTSYSSTPAAVLRYSWRPRSPHQDTSRPADSVSRA 557
TRS+Q+T +T WH T + +PA V P P +P D + R+
Sbjct: 364 TRSYQTTTRTTSKPDNTFWHPTESFGTTRSPAPVSTID-SPLKPEVPVIKPMDFMVRS 420
>U42848-2|AAA83608.2| 315|Caenorhabditis elegans Hypothetical
protein C31H1.5 protein.
Length = 315
Score = 28.3 bits (60), Expect = 6.2
Identities = 20/75 (26%), Positives = 29/75 (38%)
Frame = +1
Query: 460 MIFVTGLITWLQATFGCRLPIVQGGTISFLVPTLAILNLPAWKCPDEEILVAMSTEERRQ 639
M+F L+ L + P VQ + F +P +N AW C +S E Q
Sbjct: 1 MLFTLPLLLLLHSVIAFSTPEVQHRSKRFQLPGQQTINPEAWFCGASRFQWKISHEVISQ 60
Query: 640 VWTSRMCELSGAIAV 684
+ EL+ AV
Sbjct: 61 TCDEKAIELNHCCAV 75
>AY008141-1|AAG32094.1| 375|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 375
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/26 (57%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +3
Query: 501 LRLSTANSSRRHHIIPG-ADARDTES 575
LR+STANS RHH P A DTE+
Sbjct: 327 LRISTANSDGRHHCYPHFTCAVDTEN 352
>AF039715-1|AAB96733.2| 375|Caenorhabditis elegans G protein,
subunit alpha protein 1 protein.
Length = 375
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/26 (57%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +3
Query: 501 LRLSTANSSRRHHIIPG-ADARDTES 575
LR+STANS RHH P A DTE+
Sbjct: 327 LRISTANSDGRHHCYPHFTCAVDTEN 352
>AB003487-1|BAA22402.1| 375|Caenorhabditis elegans G protein alpha
subunit protein.
Length = 375
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/26 (57%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +3
Query: 501 LRLSTANSSRRHHIIPG-ADARDTES 575
LR+STANS RHH P A DTE+
Sbjct: 327 LRISTANSDGRHHCYPHFTCAVDTEN 352
>AB003486-1|BAA22401.1| 375|Caenorhabditis elegans G protein a(s)
subunit protein.
Length = 375
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/26 (57%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +3
Query: 501 LRLSTANSSRRHHIIPG-ADARDTES 575
LR+STANS RHH P A DTE+
Sbjct: 327 LRISTANSDGRHHCYPHFTCAVDTEN 352
>Z69634-3|CAA93454.4| 553|Caenorhabditis elegans Hypothetical
protein B0001.5 protein.
Length = 553
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -1
Query: 667 TVHTSYS-STPAAVLRYSWRPRSPHQDTSRPADSVSRASA 551
T H +S S+P A R R RSP Q RP+ +V S+
Sbjct: 398 TSHEGHSTSSPTAENRQCHRSRSPEQSNFRPSQTVPGLSS 437
>Z54218-4|CAA90958.1| 1367|Caenorhabditis elegans Hypothetical
protein F44G4.8 protein.
Length = 1367
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -2
Query: 258 SYIIDAHSPDSVQSDLDHVVVYHGIDPTTIRSQSYV 151
S ++D +PD D D V H I TI++ SY+
Sbjct: 127 SVVMDPRAPDFRSMDSDIQVAEHNITMRTIKNDSYL 162
>Z49910-9|CAA90125.1| 1367|Caenorhabditis elegans Hypothetical
protein F44G4.8 protein.
Length = 1367
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -2
Query: 258 SYIIDAHSPDSVQSDLDHVVVYHGIDPTTIRSQSYV 151
S ++D +PD D D V H I TI++ SY+
Sbjct: 127 SVVMDPRAPDFRSMDSDIQVAEHNITMRTIKNDSYL 162
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,179,264
Number of Sequences: 27780
Number of extensions: 394118
Number of successful extensions: 1208
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1204
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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