Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_F_K04
(854 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A7KCY9 Cluster: Ribosomal protein L23a; n=1; Heliconius... 132 1e-29
UniRef50_UPI00015B567B Cluster: PREDICTED: similar to ribosomal ... 112 1e-23
UniRef50_Q4GXF0 Cluster: Ribosomal protein L23Ae; n=1; Dascillus... 109 7e-23
UniRef50_P62750 Cluster: 60S ribosomal protein L23a; n=126; Euka... 84 4e-15
UniRef50_A6NCG1 Cluster: Uncharacterized protein ENSP00000339037... 80 8e-14
UniRef50_A3F4R7 Cluster: Ribosomal protein L23a; n=5; cellular o... 73 9e-12
UniRef50_A6NN95 Cluster: Uncharacterized protein ENSP00000332117... 71 5e-11
UniRef50_P04456 Cluster: 60S ribosomal protein L25; n=10; Fungi/... 68 3e-10
UniRef50_Q9LWB2 Cluster: Ribosomal protein L23; n=5; Eukaryota|R... 66 1e-09
UniRef50_Q54BQ3 Cluster: Ribosomal protein L23a; n=1; Dictyostel... 62 2e-08
UniRef50_UPI0000E460DC Cluster: PREDICTED: hypothetical protein;... 61 3e-08
UniRef50_Q2H685 Cluster: 60S ribosomal protein L25; n=6; Fungi/M... 60 9e-08
UniRef50_Q5CPV5 Cluster: 60S ribosomal protein L23A; n=2; Crypto... 53 1e-05
UniRef50_A5K303 Cluster: 60S ribosomal protein L23a, putative; n... 50 7e-05
UniRef50_UPI00005A1B15 Cluster: PREDICTED: similar to 60S riboso... 50 1e-04
UniRef50_Q7QSE5 Cluster: GLP_426_12155_12580; n=1; Giardia lambl... 50 1e-04
UniRef50_Q4MZ08 Cluster: 60S ribosomal protein L23a, putative; n... 41 0.046
UniRef50_Q4XUC9 Cluster: 60S ribosomal protein L23a, putative; n... 40 0.11
UniRef50_UPI00005A4969 Cluster: PREDICTED: similar to 60S riboso... 39 0.14
UniRef50_Q49549 Cluster: P3; n=1; Mycoplasma hyorhinis|Rep: P3 -... 38 0.24
UniRef50_A7AME1 Cluster: 60S ribosomal protein L23, putative; n=... 38 0.32
UniRef50_UPI0000E212CE Cluster: PREDICTED: hypothetical protein;... 37 0.56
UniRef50_Q9DFF6 Cluster: 60S ribosomal protein; n=8; Fungi/Metaz... 36 1.7
UniRef50_Q12IA3 Cluster: Putative uncharacterized protein precur... 33 6.9
UniRef50_A5K3S7 Cluster: Putative uncharacterized protein; n=1; ... 33 6.9
UniRef50_A3ZU56 Cluster: Putative uncharacterized protein; n=1; ... 33 9.2
UniRef50_P41165 Cluster: 60S ribosomal protein L23a; n=10; Trypa... 33 9.2
>UniRef50_A7KCY9 Cluster: Ribosomal protein L23a; n=1; Heliconius
melpomene|Rep: Ribosomal protein L23a - Heliconius
melpomene
Length = 221
Score = 132 bits (318), Expect = 1e-29
Identities = 63/88 (71%), Positives = 68/88 (77%)
Frame = +1
Query: 586 SKLKIAXXXXXXXXXXXXXXXXPVTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEP 765
+KLKIA PV KALK Q+KVVKGEHGKRVRKIR SVHFRRPKTFEP
Sbjct: 129 AKLKIAPKPKKTGIKGQKKVVKPVVKALKIQKKVVKGEHGKRVRKIRTSVHFRRPKTFEP 188
Query: 766 PRHPKYPRKSLPKRNRMDAYXIIKFPLS 849
PR+PKYPRKSLPKRNRMDAY IIK+PL+
Sbjct: 189 PRNPKYPRKSLPKRNRMDAYNIIKYPLT 216
>UniRef50_UPI00015B567B Cluster: PREDICTED: similar to ribosomal
protein L23Ae; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to ribosomal protein L23Ae - Nasonia vitripennis
Length = 247
Score = 112 bits (269), Expect = 1e-23
Identities = 50/66 (75%), Positives = 56/66 (84%)
Frame = +1
Query: 652 PVTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYXI 831
PV KALKAQ+K++KG G RVRKIR SVHF RPKTF PPR+PKYPRKS+P RNRMDA I
Sbjct: 108 PVQKALKAQKKILKGVQGSRVRKIRTSVHFHRPKTFRPPRNPKYPRKSVPNRNRMDAVNI 167
Query: 832 IKFPLS 849
IKFPL+
Sbjct: 168 IKFPLT 173
>UniRef50_Q4GXF0 Cluster: Ribosomal protein L23Ae; n=1; Dascillus
cervinus|Rep: Ribosomal protein L23Ae - Dascillus
cervinus
Length = 212
Score = 109 bits (263), Expect = 7e-23
Identities = 48/66 (72%), Positives = 55/66 (83%)
Frame = +1
Query: 652 PVTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYXI 831
PV KAL Q+KV+KG G R RKIRNSVHF RPKTF PPR+PKYPRKS+P R+RMDAY I
Sbjct: 141 PVQKALNVQKKVIKGPFGTRARKIRNSVHFHRPKTFRPPRNPKYPRKSVPTRSRMDAYNI 200
Query: 832 IKFPLS 849
IK+PL+
Sbjct: 201 IKYPLT 206
>UniRef50_P62750 Cluster: 60S ribosomal protein L23a; n=126;
Eukaryota|Rep: 60S ribosomal protein L23a - Homo sapiens
(Human)
Length = 156
Score = 84.2 bits (199), Expect = 4e-15
Identities = 38/63 (60%), Positives = 47/63 (74%)
Frame = +1
Query: 661 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYXIIKF 840
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
Query: 841 PLS 849
PL+
Sbjct: 80 PLT 82
>UniRef50_A6NCG1 Cluster: Uncharacterized protein ENSP00000339037;
n=99; Fungi/Metazoa group|Rep: Uncharacterized protein
ENSP00000339037 - Homo sapiens (Human)
Length = 156
Score = 79.8 bits (188), Expect = 8e-14
Identities = 36/63 (57%), Positives = 46/63 (73%)
Frame = +1
Query: 661 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYXIIKF 840
KALKA++ V+KG H + +KI S FRRPKT + R PKYP KS P+RN++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHNHKKKKIHTSPTFRRPKTLQLRRQPKYPWKSTPRRNKLDHYAIIKF 79
Query: 841 PLS 849
PL+
Sbjct: 80 PLT 82
>UniRef50_A3F4R7 Cluster: Ribosomal protein L23a; n=5; cellular
organisms|Rep: Ribosomal protein L23a - Taenia asiatica
(Asian tapeworm)
Length = 204
Score = 72.9 bits (171), Expect = 9e-12
Identities = 31/65 (47%), Positives = 46/65 (70%)
Frame = +1
Query: 655 VTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYXII 834
V +ALKAQ+ + G H K +K+ ++ FRRPKT+ PPR PK R +PKRN++DA+ II
Sbjct: 66 VARALKAQKAINIGAHTKGKKKVMKNIRFRRPKTYRPPRCPKDRRFEIPKRNKLDAFRII 125
Query: 835 KFPLS 849
+ P++
Sbjct: 126 RHPVT 130
>UniRef50_A6NN95 Cluster: Uncharacterized protein ENSP00000332117;
n=5; Eutheria|Rep: Uncharacterized protein
ENSP00000332117 - Homo sapiens (Human)
Length = 156
Score = 70.5 bits (165), Expect = 5e-11
Identities = 31/63 (49%), Positives = 43/63 (68%)
Frame = +1
Query: 661 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYXIIKF 840
KALKA++ +KG H +K R S+ F+RPKT R P+YP KS P+RN++ Y +IKF
Sbjct: 20 KALKAKKAALKGVHSHIKKKTRTSLTFQRPKTLRRRRRPEYPWKSTPRRNKLGHYAVIKF 79
Query: 841 PLS 849
PL+
Sbjct: 80 PLT 82
>UniRef50_P04456 Cluster: 60S ribosomal protein L25; n=10;
Fungi/Metazoa group|Rep: 60S ribosomal protein L25 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 142
Score = 67.7 bits (158), Expect = 3e-10
Identities = 30/66 (45%), Positives = 44/66 (66%)
Frame = +1
Query: 652 PVTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYXI 831
P KA A++ VVKG +GK+ K+R S FR PKT + R PKY K++P NR+D+Y +
Sbjct: 3 PSAKATAAKKAVVKGTNGKKALKVRTSATFRLPKTLKLARAPKYASKAVPHYNRLDSYKV 62
Query: 832 IKFPLS 849
I+ P++
Sbjct: 63 IEQPIT 68
>UniRef50_Q9LWB2 Cluster: Ribosomal protein L23; n=5; Eukaryota|Rep:
Ribosomal protein L23 - Spinacia oleracea (Spinach)
Length = 155
Score = 66.1 bits (154), Expect = 1e-09
Identities = 33/69 (47%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
Frame = +1
Query: 652 PVTKALKAQRKVVKGEH---GKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDA 822
P +ALKA + V G + K +KIR V F RPKTF+ R+PKYPR S RN++D
Sbjct: 13 PKAQALKAAKAVKSGSNILKKKASKKIRTKVTFHRPKTFKKERNPKYPRISATPRNKLDH 72
Query: 823 YXIIKFPLS 849
Y I+K+PL+
Sbjct: 73 YQILKYPLT 81
>UniRef50_Q54BQ3 Cluster: Ribosomal protein L23a; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L23a -
Dictyostelium discoideum AX4
Length = 169
Score = 61.7 bits (143), Expect = 2e-08
Identities = 30/63 (47%), Positives = 38/63 (60%)
Frame = +1
Query: 661 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYXIIKF 840
KA A V KG K RK+R SV FRRP T P+ P YPR+S+ K +MD + I+K
Sbjct: 33 KAKAAASAVKKGVSNKSTRKVRTSVIFRRPVTLNNPKKPAYPRRSVNKITKMDQFRILKA 92
Query: 841 PLS 849
PL+
Sbjct: 93 PLT 95
>UniRef50_UPI0000E460DC Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 109
Score = 61.3 bits (142), Expect = 3e-08
Identities = 27/51 (52%), Positives = 35/51 (68%)
Frame = +1
Query: 664 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRM 816
ALK ++ ++G H R RKI V FRRPKT++ R PKY RKS+PKR R+
Sbjct: 43 ALKTKKAALRGTHATRKRKIHTKVTFRRPKTYKAARVPKYTRKSIPKRPRL 93
>UniRef50_Q2H685 Cluster: 60S ribosomal protein L25; n=6;
Fungi/Metazoa group|Rep: 60S ribosomal protein L25 -
Chaetomium globosum (Soil fungus)
Length = 156
Score = 59.7 bits (138), Expect = 9e-08
Identities = 29/63 (46%), Positives = 38/63 (60%)
Frame = +1
Query: 661 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYXIIKF 840
+A KA + +KG H + K+R S F RPKT R PKYPRKS+P R+D + II
Sbjct: 19 QAKKAAQAALKGVHAHKRTKVRLSTTFHRPKTLVLSRAPKYPRKSVPHEPRLDEHKIIVH 78
Query: 841 PLS 849
PL+
Sbjct: 79 PLN 81
>UniRef50_Q5CPV5 Cluster: 60S ribosomal protein L23A; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L23A -
Cryptosporidium parvum Iowa II
Length = 156
Score = 52.8 bits (121), Expect = 1e-05
Identities = 28/65 (43%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +1
Query: 658 TKA-LKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYXII 834
TKA K + VK KIR V F RPKT + R+PKY RKS+ + +D Y II
Sbjct: 18 TKANAKKTAQAVKNSKRSSTTKIRTRVQFYRPKTLKLQRNPKYERKSIKTQKSLDCYDII 77
Query: 835 KFPLS 849
K P++
Sbjct: 78 KRPIT 82
>UniRef50_A5K303 Cluster: 60S ribosomal protein L23a, putative; n=3;
Plasmodium|Rep: 60S ribosomal protein L23a, putative -
Plasmodium vivax
Length = 195
Score = 50.0 bits (114), Expect = 7e-05
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Frame = +1
Query: 676 QRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPR--KSLPKRNRMDAYXIIKFPLS 849
Q K E K+ +KI S+ F+RPKT + P++PK P+ KS K+ +D Y I+K+PL+
Sbjct: 63 QVKKAAAEESKKKKKITTSIKFKRPKTLKLPKNPKCPKVIKSCYKKT-LDKYGILKYPLT 121
>UniRef50_UPI00005A1B15 Cluster: PREDICTED: similar to 60S ribosomal
protein L23a; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 60S ribosomal protein L23a - Canis
familiaris
Length = 169
Score = 49.6 bits (113), Expect = 1e-04
Identities = 21/34 (61%), Positives = 25/34 (73%)
Frame = +1
Query: 748 PKTFEPPRHPKYPRKSLPKRNRMDAYXIIKFPLS 849
PKT R PK PRKS P+RN++D Y IIKFPL+
Sbjct: 3 PKTLHLRRQPKCPRKSAPRRNKLDHYAIIKFPLT 36
>UniRef50_Q7QSE5 Cluster: GLP_426_12155_12580; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_426_12155_12580 - Giardia lamblia
ATCC 50803
Length = 141
Score = 49.6 bits (113), Expect = 1e-04
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Frame = +1
Query: 661 KALKAQRKVVKGEHGKRV--RKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYXII 834
+ALKAQ+ ++ HG RV +KIR +VHF RPKT + P YPR + K + D ++
Sbjct: 6 QALKAQKAIL---HGTRVEAKKIRTNVHFFRPKTLVHKKAPLYPRNPIKKGSWDDPCDLL 62
Query: 835 KFPL 846
++P+
Sbjct: 63 RYPI 66
>UniRef50_Q4MZ08 Cluster: 60S ribosomal protein L23a, putative; n=2;
Theileria|Rep: 60S ribosomal protein L23a, putative -
Theileria parva
Length = 152
Score = 40.7 bits (91), Expect = 0.046
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +1
Query: 661 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRK-SLPKRNRMDAYXIIK 837
KA A R V K K+V+ RN+ HF R +T R PKY +K ++D + I++
Sbjct: 16 KAKLASRSVKKSTSVKKVKTRRNT-HFFRGRTLSLKRTPKYEKKVKTAYTKKLDKFSIVR 74
Query: 838 FPLS 849
+PL+
Sbjct: 75 YPLT 78
>UniRef50_Q4XUC9 Cluster: 60S ribosomal protein L23a, putative; n=2;
Plasmodium chabaudi|Rep: 60S ribosomal protein L23a,
putative - Plasmodium chabaudi
Length = 147
Score = 39.5 bits (88), Expect = 0.11
Identities = 19/49 (38%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Frame = +1
Query: 709 RVRKIRNSVHFRRPKTFEPPRHPKYPR--KSLPKRNRMDAYXIIKFPLS 849
+++KI S+ F+RP+T ++PK P+ KS + +D Y IIK+PL+
Sbjct: 26 KMQKITTSIRFKRPRTLRLKKNPKCPKILKSCHTKT-LDKYGIIKYPLT 73
>UniRef50_UPI00005A4969 Cluster: PREDICTED: similar to 60S ribosomal
protein L23a; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 60S ribosomal protein L23a - Canis
familiaris
Length = 175
Score = 39.1 bits (87), Expect = 0.14
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +1
Query: 769 RHPKYPRKSLPKRNRMDAYXIIKFPLS 849
R PKYPRKS P+RN+ D I+KF L+
Sbjct: 48 REPKYPRKSTPRRNKHDHDAIVKFSLT 74
>UniRef50_Q49549 Cluster: P3; n=1; Mycoplasma hyorhinis|Rep: P3 -
Mycoplasma hyorhinis
Length = 1187
Score = 38.3 bits (85), Expect = 0.24
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3
Query: 153 TCVSQNTGTCPESSCACPETSCACPE 230
+C ++ G C E SCACP T+CAC E
Sbjct: 380 SCAQEHCG-CQEESCACPNTTCACTE 404
Score = 38.3 bits (85), Expect = 0.24
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3
Query: 153 TCVSQNTGTCPESSCACPETSCACPE 230
+C ++ G C E SCACP T+CAC E
Sbjct: 836 SCAQEHCG-CQEESCACPNTTCACTE 860
Score = 34.3 bits (75), Expect = 4.0
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +3
Query: 153 TCVSQN-TGTCPESSCACPETSCACPET 233
TC Q T +C + C C E SCACP T
Sbjct: 371 TCGCQEATCSCAQEHCGCQEESCACPNT 398
Score = 34.3 bits (75), Expect = 4.0
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +3
Query: 153 TCVSQN-TGTCPESSCACPETSCACPET 233
TC Q T +C + C C E SCACP T
Sbjct: 827 TCGCQEATCSCAQEHCGCQEESCACPNT 854
>UniRef50_A7AME1 Cluster: 60S ribosomal protein L23, putative; n=1;
Babesia bovis|Rep: 60S ribosomal protein L23, putative -
Babesia bovis
Length = 154
Score = 37.9 bits (84), Expect = 0.32
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 661 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRN-RMDAYXIIK 837
K K VK + KIR + HF R +T P+ PK R + + ++D + IIK
Sbjct: 17 KQAKIAANSVKKSTTAKGYKIRRNTHFFRGRTLTLPKSPKVKRHLITAHSKKLDKFSIIK 76
Query: 838 FPLS 849
+PL+
Sbjct: 77 YPLT 80
>UniRef50_UPI0000E212CE Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 255
Score = 37.1 bits (82), Expect = 0.56
Identities = 21/40 (52%), Positives = 23/40 (57%)
Frame = -1
Query: 839 NLMXL*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRI 720
NLM S FLLG F GYLGCL +VLG RK L +
Sbjct: 173 NLMIARWSSLFLLGVLFQGYLGCLRSHSVLGRRKAQLLSV 212
>UniRef50_Q9DFF6 Cluster: 60S ribosomal protein; n=8; Fungi/Metazoa
group|Rep: 60S ribosomal protein - Oncorhynchus mykiss
(Rainbow trout) (Salmo gairdneri)
Length = 96
Score = 35.5 bits (78), Expect = 1.7
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +1
Query: 784 PRKSLPKRNRMDAYXIIKFPLS 849
PRKS +RN++D Y IIKFPL+
Sbjct: 1 PRKSASRRNKLDHYAIIKFPLT 22
>UniRef50_Q12IA3 Cluster: Putative uncharacterized protein
precursor; n=1; Shewanella denitrificans OS217|Rep:
Putative uncharacterized protein precursor - Shewanella
denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)
Length = 149
Score = 33.5 bits (73), Expect = 6.9
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 162 SQNTGTCPESSCACPETSC 218
SQN+G C E+SC CP +SC
Sbjct: 87 SQNSGDCCENSCRCPVSSC 105
>UniRef50_A5K3S7 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 122
Score = 33.5 bits (73), Expect = 6.9
Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +1
Query: 670 KAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRK-SLPKRNRMD 819
K +K+ + ++GK++R+ +N RRPK + R PK +K P++ + D
Sbjct: 36 KNGKKIRRPKNGKKIRRPKNGKKIRRPKNGKKIRRPKNGKKIRRPEKRQKD 86
Score = 33.1 bits (72), Expect = 9.2
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +1
Query: 670 KAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRN 810
K +K+ + ++GK++R+ +N RRPK + R PK +K +N
Sbjct: 9 KNGKKIRRQKNGKKIRRPKNGKKIRRPKNGKKIRRPKNGKKIRRPKN 55
Score = 33.1 bits (72), Expect = 9.2
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +1
Query: 670 KAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRN 810
K +K+ + ++GK++R+ +N RRPK + R PK +K +N
Sbjct: 18 KNGKKIRRPKNGKKIRRPKNGKKIRRPKNGKKIRRPKNGKKIRRPKN 64
Score = 33.1 bits (72), Expect = 9.2
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +1
Query: 670 KAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRN 810
K +K+ + ++GK++R+ +N RRPK + R PK +K +N
Sbjct: 27 KNGKKIRRPKNGKKIRRPKNGKKIRRPKNGKKIRRPKNGKKIRRPKN 73
>UniRef50_A3ZU56 Cluster: Putative uncharacterized protein; n=1;
Blastopirellula marina DSM 3645|Rep: Putative
uncharacterized protein - Blastopirellula marina DSM
3645
Length = 155
Score = 33.1 bits (72), Expect = 9.2
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 153 TCVSQNTGTCPESSCACPETSCACPE 230
TC + PE +C PE SCA PE
Sbjct: 94 TCCAPEPACAPEPTCCAPEPSCAAPE 119
>UniRef50_P41165 Cluster: 60S ribosomal protein L23a; n=10;
Trypanosomatidae|Rep: 60S ribosomal protein L23a -
Trypanosoma brucei brucei
Length = 164
Score = 33.1 bits (72), Expect = 9.2
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +1
Query: 715 RKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYXIIKFPLS 849
RK FRRP T+ P K +N+ DA+ II++PL+
Sbjct: 46 RKAYTRPQFRRPHTYRRPATVKPSSNVSAIKNKWDAFRIIRYPLT 90
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 432,780,114
Number of Sequences: 1657284
Number of extensions: 6371298
Number of successful extensions: 19921
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 18881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19873
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 75423184424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -