Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_F_K03
         (799 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    25   0.92 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   3.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   3.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   3.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   3.7  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         22   4.9  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   6.5  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   6.5  

>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 24.6 bits (51), Expect = 0.92
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = +1

Query: 445 PVPL--KYLNERVSMYMHAYTLYSAVRPYGCSVVMGTWTDYEGPQMY 579
           PVP+  + LN+ + +    YT+     P GC+VV+GT+  +   + Y
Sbjct: 61  PVPIIARQLNQDLKLASGDYTV-----PAGCTVVIGTFKVHRLEEYY 102


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +3

Query: 567 PSDVYARSQWCIFFIFWL 620
           PS       WC+ F FW+
Sbjct: 124 PSAERVAWMWCLIFAFWV 141


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +3

Query: 567 PSDVYARSQWCIFFIFWL 620
           PS       WC+ F FW+
Sbjct: 124 PSAERVAWMWCLIFAFWV 141


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +3

Query: 567 PSDVYARSQWCIFFIFWL 620
           PS       WC+ F FW+
Sbjct: 124 PSAERVAWMWCLIFAFWV 141


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +3

Query: 567 PSDVYARSQWCIFFIFWL 620
           PS       WC+ F FW+
Sbjct: 124 PSAERVAWMWCLIFAFWV 141


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +3

Query: 627 RKSQTGSKNRDRKAKTWRPNSERT 698
           R+ +TG +++ R+   +RP + RT
Sbjct: 217 RQPKTGREDQTRRNPYYRPRTSRT 240


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +3

Query: 69  WTNISVFVLVEI 104
           WT++SV+ LVEI
Sbjct: 198 WTSLSVYHLVEI 209


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +3

Query: 69  WTNISVFVLVEI 104
           WT++SV+ LVEI
Sbjct: 194 WTSLSVYHLVEI 205


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,470
Number of Sequences: 336
Number of extensions: 4376
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)